RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 Q86TA4 180 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 OR10AG1Q8NH19 301 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 TRAV12-2A0A075B6T6 113 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 KRTAP10-9P60411 292 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 PATE2Q6UY27 113 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 ORMDL3Q8N138 153 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 C7orf71A4D174 169 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 DEFB1P60022 68 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 FXYD5Q96DB9 178 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 TNRC18O15417 2968 aaPredicted RBP9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 TEX22C9J3V5 150 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 SMKR1H3BMG3 65 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 J3QLI3 93 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 MRPL52Q86TS9 123 aaKnown RBP9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 CST9LQ9H4G1 147 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 F8P00451 2351 aa9.68□□□□□ -0.86
PCDHB11-201ENST00000354757 IGHV3-53P01767 116 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 C11orf71Q6IPW1 123 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 ZNF295-AS1Q8N0V1 137 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 OR1N2Q8NGR9 330 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 XCL2Q9UBD3 114 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 GAGE12BA1L429 117 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 TTC9CQ8N5M4 171 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 VGLL1Q99990 258 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 I3L2K1 104 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 OVOL1O14753 267 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 ARMS2P0C7Q2 107 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 OCIAD2Q56VL3 154 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 C5orf56Q8N8D9 126 aa9.67□□□□□ -0.86
PCDHB11-201ENST00000354757 CTSGP08311 255 aa9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 IGLL1P15814 213 aa9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 Q0VG73 95 aa9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 FABP2P12104 132 aa9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 C14orf178Q8N769 122 aaPredicted RBP9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 AMN1Q8IY45 258 aa9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 THAP8Q8NA92 274 aa9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 LINC00477Q96M19 166 aa9.66□□□□□ -0.86
PCDHB11-201ENST00000354757 CPAMD8Q8IZJ3 1885 aa9.65□□□□□ -0.86
PCDHB11-201ENST00000354757 H3BRN7 92 aa9.65□□□□□ -0.86
PCDHB11-201ENST00000354757 IGLV11-55A0A075B6I3 123 aa9.65□□□□□ -0.86
PCDHB11-201ENST00000354757 A0A087WWL8 130 aa9.65□□□□□ -0.86
PCDHB11-201ENST00000354757 TMEM213A2RRL7 107 aa9.65□□□□□ -0.86
PCDHB11-201ENST00000354757 TRBV12-3P01733 135 aa9.65□□□□□ -0.86
PCDHB11-201ENST00000354757 Q1RN00 199 aa9.65□□□□□ -0.86
PCDHB11-201ENST00000354757 C3orf56Q8N813 242 aa9.65□□□□□ -0.86
PCDHB11-201ENST00000354757 KLK9Q9UKQ9 250 aa9.65□□□□□ -0.86
PCDHB11-201ENST00000354757 DUSP14O95147 198 aaKnown RBP9.65□□□□□ -0.87
PCDHB11-201ENST00000354757 AJUBAQ96IF1 538 aa9.65□□□□□ -0.87
PCDHB11-201ENST00000354757 TMEM160Q9NX00 188 aa9.65□□□□□ -0.87
PCDHB11-201ENST00000354757 TNFRSF18Q9Y5U5 241 aa9.65□□□□□ -0.87
PCDHB11-201ENST00000354757 D6R8Y8 96 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 NPIPB6E9PJ23 425 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 SLURP1P55000 103 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 Q6AWC8 147 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 NPBQ8NG41 125 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 C11orf1Q9H5F2 150 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 PCSK5Q92824 1860 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 P0C879 139 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 LY6G5BQ8NDX9 201 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 HOXD3P31249 432 aaPredicted RBP9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 VWC2Q2TAL6 325 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 C18orf32Q8TCD1 76 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 MRPS16Q9Y3D3 137 aaKnown RBP9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 SPCS1Q9Y6A9 102 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 OR11H12B2RN74 326 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 SLAQ13239 276 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 SRSF9Q13242 221 aaKnown RBP eCLIP9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 FANCD2OSQ96PS1 177 aa9.64□□□□□ -0.87
PCDHB11-201ENST00000354757 SMAGPQ0VAQ4 97 aa9.63□□□□□ -0.87
PCDHB11-201ENST00000354757 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
PCDHB11-201ENST00000354757 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
PCDHB11-201ENST00000354757 LINC01619G3V211 115 aa9.63□□□□□ -0.87
PCDHB11-201ENST00000354757 K7EN84 100 aa9.63□□□□□ -0.87
PCDHB11-201ENST00000354757 NDUFA4O00483 81 aa9.63□□□□□ -0.87
PCDHB11-201ENST00000354757 PDE6HQ13956 83 aa9.63□□□□□ -0.87
PCDHB11-201ENST00000354757 ZC2HC1AQ96GY0 325 aa9.63□□□□□ -0.87
PCDHB11-201ENST00000354757 ZNF414Q96IQ9 312 aa9.63□□□□□ -0.87
PCDHB11-201ENST00000354757 FRYQ5TBA9 3013 aa9.62□□□□□ -0.87
PCDHB11-201ENST00000354757 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
PCDHB11-201ENST00000354757 TMEM97Q5BJF2 176 aa9.62□□□□□ -0.87
PCDHB11-201ENST00000354757 GTSCR1Q86UQ5 136 aa9.62□□□□□ -0.87
PCDHB11-201ENST00000354757 C10orf99Q6UWK7 81 aa9.62□□□□□ -0.87
PCDHB11-201ENST00000354757 PRR25Q96S07 402 aa9.62□□□□□ -0.87
PCDHB11-201ENST00000354757 LINC00574Q9H8X3 128 aa9.62□□□□□ -0.87
PCDHB11-201ENST00000354757 V9GYV3 84 aa9.62□□□□□ -0.87
PCDHB11-201ENST00000354757 TRGV1A0A0A0MS02 117 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 UBE2L6O14933 153 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 SAMD13Q5VXD3 122 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 OR2K2Q8NGT1 345 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 FOXC2Q99958 501 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 ST20Q9HBF5 79 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 HELZ2Q9BYK8 2649 aaKnown RBP9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 TMEM170BQ5T4T1 132 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 RNF114Q9Y508 228 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 LEPP41159 167 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms