RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 DEFB125Q8N687 156 aa15.03■□□□□ -0
COL13A1-201ENST00000354547 FBLL1A6NHQ2 334 aaKnown RBP15.02■□□□□ -0
COL13A1-201ENST00000354547 C5orf56Q8N8D9 126 aa15.02■□□□□ -0
COL13A1-201ENST00000354547 C16orf92Q96LL3 132 aa15.02□□□□□ -0.01
COL13A1-201ENST00000354547 TRBV12-3P01733 135 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 IGF1P05019 195 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 PCP2Q8IVA1 136 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 NAA38Q9BRA0 125 aaKnown RBP15.01□□□□□ -0.01
COL13A1-201ENST00000354547 SLC50A1Q9BRV3 221 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 IGHV3-11P01762 117 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 PRSS1P07477 247 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 PAX8Q06710 450 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 LGALS9BQ3B8N2 356 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 LGALS9CQ6DKI2 356 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 TRAV40A0A0B4J280 105 aa15.01□□□□□ -0.01
COL13A1-201ENST00000354547 RPL11P62913 178 aaKnown RBP15.01□□□□□ -0.01
COL13A1-201ENST00000354547 GNLYP22749 145 aa15□□□□□ -0.01
COL13A1-201ENST00000354547 RAB9AP51151 201 aa15□□□□□ -0.01
COL13A1-201ENST00000354547 C21orf62-AS1Q17RA5 79 aa15□□□□□ -0.01
COL13A1-201ENST00000354547 LINC01559Q495D7 138 aa15□□□□□ -0.01
COL13A1-201ENST00000354547 LCNL1Q6ZST4 164 aa15□□□□□ -0.01
COL13A1-201ENST00000354547 ARL6IP6Q8N6S5 226 aa15□□□□□ -0.01
COL13A1-201ENST00000354547 TRAV41A0A0B4J266 112 aa15□□□□□ -0.01
COL13A1-201ENST00000354547 TMEM97Q5BJF2 176 aa15□□□□□ -0.01
COL13A1-201ENST00000354547 TM4SF20Q53R12 229 aa14.99□□□□□ -0.01
COL13A1-201ENST00000354547 TTTY13Q9BZ97 58 aa14.99□□□□□ -0.01
COL13A1-201ENST00000354547 UTP20O75691 2785 aaKnown RBP14.99□□□□□ -0.01
COL13A1-201ENST00000354547 FLNCQ14315 2725 aa14.99□□□□□ -0.01
COL13A1-201ENST00000354547 TRBV7-1A0A0A6YYK4 115 aa14.99□□□□□ -0.01
COL13A1-201ENST00000354547 FGF6P10767 208 aa14.99□□□□□ -0.01
COL13A1-201ENST00000354547 IGHV4-39P01824 125 aa14.98□□□□□ -0.01
COL13A1-201ENST00000354547 UNQ9165/PRO28630Q6UXU0 137 aa14.98□□□□□ -0.01
COL13A1-201ENST00000354547 ITLN2Q8WWU7 325 aaPredicted RBP14.98□□□□□ -0.01
COL13A1-201ENST00000354547 PKD1L2Q7Z442 2459 aa14.98□□□□□ -0.01
COL13A1-201ENST00000354547 C7orf71A4D174 169 aa14.98□□□□□ -0.01
COL13A1-201ENST00000354547 SPANXN1Q5VSR9 72 aa14.98□□□□□ -0.01
COL13A1-201ENST00000354547 TMEM158Q8WZ71 300 aa14.98□□□□□ -0.01
COL13A1-201ENST00000354547 TRAV8-6A0A0B4J262 113 aa14.98□□□□□ -0.01
COL13A1-201ENST00000354547 H3BVH4 76 aa14.98□□□□□ -0.01
COL13A1-201ENST00000354547 ARL3P36405 182 aa14.97□□□□□ -0.01
COL13A1-201ENST00000354547 SMAD7O15105 426 aaKnown RBP14.97□□□□□ -0.01
COL13A1-201ENST00000354547 PRR9Q5T870 116 aa14.97□□□□□ -0.01
COL13A1-201ENST00000354547 GLMPQ8WWB7 406 aa14.97□□□□□ -0.01
COL13A1-201ENST00000354547 C20orf173Q96LM9 149 aa14.97□□□□□ -0.01
COL13A1-201ENST00000354547 CFAP46Q8IYW2 2715 aa14.96□□□□□ -0.01
COL13A1-201ENST00000354547 RNF151Q2KHN1 245 aa14.96□□□□□ -0.01
COL13A1-201ENST00000354547 PSMG3-AS1Q96PY0 264 aa14.96□□□□□ -0.01
COL13A1-201ENST00000354547 CD5LO43866 347 aa14.96□□□□□ -0.01
COL13A1-201ENST00000354547 PPBPP02775 128 aa14.96□□□□□ -0.01
COL13A1-201ENST00000354547 RAB37Q96AX2 223 aa14.96□□□□□ -0.01
COL13A1-201ENST00000354547 CNFNQ9BYD5 112 aa14.96□□□□□ -0.01
COL13A1-201ENST00000354547 MOB4Q9Y3A3 225 aa14.96□□□□□ -0.01
COL13A1-201ENST00000354547 RBAKDNA6NC62 111 aa14.95□□□□□ -0.02
COL13A1-201ENST00000354547 FOXC2Q99958 501 aa14.95□□□□□ -0.02
COL13A1-201ENST00000354547 CENPEQ02224 2701 aa14.95□□□□□ -0.02
COL13A1-201ENST00000354547 A1L4Q6 167 aa14.95□□□□□ -0.02
COL13A1-201ENST00000354547 SMIM15Q7Z3B0 74 aa14.95□□□□□ -0.02
COL13A1-201ENST00000354547 IGHV4-38-2P0DP08 117 aa14.95□□□□□ -0.02
COL13A1-201ENST00000354547 DOPEY2Q9Y3R5 2298 aa14.95□□□□□ -0.02
COL13A1-201ENST00000354547 IGHV4-61A0A0C4DH41 118 aa14.94□□□□□ -0.02
COL13A1-201ENST00000354547 FCER1GP30273 86 aa14.94□□□□□ -0.02
COL13A1-201ENST00000354547 OR2K2Q8NGT1 345 aa14.94□□□□□ -0.02
COL13A1-201ENST00000354547 CBY1Q9Y3M2 126 aa14.94□□□□□ -0.02
COL13A1-201ENST00000354547 M0R381 172 aa14.94□□□□□ -0.02
COL13A1-201ENST00000354547 BOD1L2Q8IYS8 172 aa14.94□□□□□ -0.02
COL13A1-201ENST00000354547 PIFOQ8TCI5 191 aa14.94□□□□□ -0.02
COL13A1-201ENST00000354547 NXT2Q9NPJ8 142 aaKnown RBP14.94□□□□□ -0.02
COL13A1-201ENST00000354547 CSMD2Q7Z408 3487 aa14.94□□□□□ -0.02
COL13A1-201ENST00000354547 IGHV7-4-1A0A0J9YVY3 117 aa14.93□□□□□ -0.02
COL13A1-201ENST00000354547 F6UB75 175 aa14.93□□□□□ -0.02
COL13A1-201ENST00000354547 SRD5A1P18405 259 aa14.93□□□□□ -0.02
COL13A1-201ENST00000354547 SRSF2Q01130 221 aaKnown RBP14.93□□□□□ -0.02
COL13A1-201ENST00000354547 KLK15Q9H2R5 256 aa14.93□□□□□ -0.02
COL13A1-201ENST00000354547 IGKV2D-26A0A0A0MRZ7 120 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 OR1N2Q8NGR9 330 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 HIF1ANQ9NWT6 349 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 IGHV1-69DA0A0B4J2H0 117 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 IGHV1-69P01742 117 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 PF4V1P10720 104 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 Q6ZS46 218 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 GTSCR1Q86UQ5 136 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 USP9YO00507 2555 aaPredicted RBP14.92□□□□□ -0.02
COL13A1-201ENST00000354547 KIR3DS1Q14943 382 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 TMEM160Q9NX00 188 aa14.92□□□□□ -0.02
COL13A1-201ENST00000354547 SFTPCP11686 197 aa14.91□□□□□ -0.02
COL13A1-201ENST00000354547 BLCAPP62952 87 aa14.91□□□□□ -0.02
COL13A1-201ENST00000354547 H3BUX3 64 aa14.91□□□□□ -0.02
COL13A1-201ENST00000354547 SMIM17P0DL12 118 aa14.91□□□□□ -0.02
COL13A1-201ENST00000354547 ODF1Q14990 250 aa14.91□□□□□ -0.02
COL13A1-201ENST00000354547 C9orf47Q6ZRZ4 202 aa14.91□□□□□ -0.02
COL13A1-201ENST00000354547 K7EP13 123 aa14.9□□□□□ -0.02
COL13A1-201ENST00000354547 WFDC12Q8WWY7 111 aa14.9□□□□□ -0.02
COL13A1-201ENST00000354547 AP1S3Q96PC3 154 aa14.9□□□□□ -0.02
COL13A1-201ENST00000354547 U3KQE9 123 aa14.9□□□□□ -0.02
COL13A1-201ENST00000354547 MYO18BQ8IUG5 2567 aa14.9□□□□□ -0.02
COL13A1-201ENST00000354547 H3BUT2 72 aa14.9□□□□□ -0.02
COL13A1-201ENST00000354547 S100A4P26447 101 aaKnown RBP14.9□□□□□ -0.02
COL13A1-201ENST00000354547 DEFB104AQ8WTQ1 72 aa14.9□□□□□ -0.02
COL13A1-201ENST00000354547 PEF1Q9UBV8 284 aaKnown RBP14.9□□□□□ -0.02
COL13A1-201ENST00000354547 Q8N8P6 123 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms