RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 A0A0J9YWU9 116 aa15.99■□□□□ 0.15
SHMT1-203ENST00000354098 AKR1C3P42330 323 aa15.99■□□□□ 0.15
SHMT1-203ENST00000354098 TXNDC17Q9BRA2 123 aa15.99■□□□□ 0.15
SHMT1-203ENST00000354098 RBFOX3A6NFN3 312 aa15.99■□□□□ 0.15
SHMT1-203ENST00000354098 ZNF705GA8MUZ8 300 aaPredicted RBP15.99■□□□□ 0.15
SHMT1-203ENST00000354098 HTN1P15515 57 aa15.99■□□□□ 0.15
SHMT1-203ENST00000354098 Q86TA4 180 aa15.99■□□□□ 0.15
SHMT1-203ENST00000354098 NEU1Q99519 415 aa15.99■□□□□ 0.15
SHMT1-203ENST00000354098 C20orf144Q9BQM9 153 aa15.99■□□□□ 0.15
SHMT1-203ENST00000354098 FBLL1A6NHQ2 334 aaKnown RBP15.98■□□□□ 0.15
SHMT1-203ENST00000354098 MIFP14174 115 aa15.98■□□□□ 0.15
SHMT1-203ENST00000354098 UBE2G1P62253 170 aa15.98■□□□□ 0.15
SHMT1-203ENST00000354098 TMEM256Q8N2U0 113 aa15.98■□□□□ 0.15
SHMT1-203ENST00000354098 FMC1Q96HJ9 113 aa15.98■□□□□ 0.15
SHMT1-203ENST00000354098 NIPSNAP3BQ9BS92 247 aa15.98■□□□□ 0.15
SHMT1-203ENST00000354098 NDFIP1Q9BT67 221 aa15.98■□□□□ 0.15
SHMT1-203ENST00000354098 EDA2RQ9HAV5 297 aa15.98■□□□□ 0.15
SHMT1-203ENST00000354098 H7BYZ3 331 aa15.97■□□□□ 0.15
SHMT1-203ENST00000354098 TMEM183BQ1AE95 376 aa15.97■□□□□ 0.15
SHMT1-203ENST00000354098 AZU1P20160 251 aa15.96■□□□□ 0.15
SHMT1-203ENST00000354098 TAGLN2P37802 199 aaKnown RBP15.96■□□□□ 0.15
SHMT1-203ENST00000354098 C11orf52Q96A22 123 aa15.96■□□□□ 0.15
SHMT1-203ENST00000354098 DERL1Q9BUN8 251 aa15.96■□□□□ 0.15
SHMT1-203ENST00000354098 SMIM9A6NGZ8 99 aa15.95■□□□□ 0.14
SHMT1-203ENST00000354098 PDE6DO43924 150 aa15.95■□□□□ 0.14
SHMT1-203ENST00000354098 ZNF80P51504 273 aaPredicted RBP15.95■□□□□ 0.14
SHMT1-203ENST00000354098 RRN3P1Q2M238 152 aa15.95■□□□□ 0.14
SHMT1-203ENST00000354098 TOR2AQ5JU69 321 aa15.95■□□□□ 0.14
SHMT1-203ENST00000354098 SAPCD1Q5SSQ6 148 aa15.95■□□□□ 0.14
SHMT1-203ENST00000354098 TAS2R60P59551 318 aa15.95■□□□□ 0.14
SHMT1-203ENST00000354098 ZNF506Q5JVG8 444 aa15.95■□□□□ 0.14
SHMT1-203ENST00000354098 Q6AWC8 147 aa15.95■□□□□ 0.14
SHMT1-203ENST00000354098 FAM210AQ96ND0 272 aa15.95■□□□□ 0.14
SHMT1-203ENST00000354098 TRBV6-1A0A0K0K1D8 114 aa15.94■□□□□ 0.14
SHMT1-203ENST00000354098 LTAP01374 205 aa15.94■□□□□ 0.14
SHMT1-203ENST00000354098 RPL35P42766 123 aaKnown RBP15.94■□□□□ 0.14
SHMT1-203ENST00000354098 EIF5A2Q9GZV4 153 aaKnown RBP15.94■□□□□ 0.14
SHMT1-203ENST00000354098 GCGP01275 180 aa15.93■□□□□ 0.14
SHMT1-203ENST00000354098 C11orf68Q9H3H3 251 aaKnown RBP15.93■□□□□ 0.14
SHMT1-203ENST00000354098 MED9Q9NWA0 146 aa15.93■□□□□ 0.14
SHMT1-203ENST00000354098 ZFP30Q9Y2G7 519 aa15.93■□□□□ 0.14
SHMT1-203ENST00000354098 EMP1P54849 157 aa15.92■□□□□ 0.14
SHMT1-203ENST00000354098 SMUG1Q53HV7 270 aa15.92■□□□□ 0.14
SHMT1-203ENST00000354098 ZNF767PQ75MW2 155 aa15.92■□□□□ 0.14
SHMT1-203ENST00000354098 NHLRC2Q8NBF2 726 aa15.92■□□□□ 0.14
SHMT1-203ENST00000354098 PYGO2Q9BRQ0 406 aa15.92■□□□□ 0.14
SHMT1-203ENST00000354098 S100A9P06702 114 aaKnown RBP15.92■□□□□ 0.14
SHMT1-203ENST00000354098 MUC21Q5SSG8 566 aa15.92■□□□□ 0.14
SHMT1-203ENST00000354098 ZC2HC1AQ96GY0 325 aa15.91■□□□□ 0.14
SHMT1-203ENST00000354098 TP53TG3Q9ULZ0 132 aa15.91■□□□□ 0.14
SHMT1-203ENST00000354098 TRAV21A0A0B4J279 112 aa15.9■□□□□ 0.14
SHMT1-203ENST00000354098 RAB19A4D1S5 217 aa15.9■□□□□ 0.14
SHMT1-203ENST00000354098 RGS13O14921 159 aa15.9■□□□□ 0.14
SHMT1-203ENST00000354098 RAB14P61106 215 aa15.9■□□□□ 0.14
SHMT1-203ENST00000354098 IGHV1OR15-1A0A075B7D0 117 aa15.89■□□□□ 0.13
SHMT1-203ENST00000354098 PLAC8L1A1L4L8 177 aa15.89■□□□□ 0.13
SHMT1-203ENST00000354098 BAGE2Q86Y30 109 aa15.89■□□□□ 0.13
SHMT1-203ENST00000354098 TMEM183AQ8IXX5 376 aa15.89■□□□□ 0.13
SHMT1-203ENST00000354098 RNASE8Q8TDE3 154 aaKnown RBP15.89■□□□□ 0.13
SHMT1-203ENST00000354098 PFN1P07737 140 aaKnown RBP15.89■□□□□ 0.13
SHMT1-203ENST00000354098 CRIP1P50238 77 aa15.89■□□□□ 0.13
SHMT1-203ENST00000354098 SRSF3P84103 164 aaKnown RBP15.89■□□□□ 0.13
SHMT1-203ENST00000354098 COX8CQ7Z4L0 72 aa15.89■□□□□ 0.13
SHMT1-203ENST00000354098 EIF4E3Q8N5X7 224 aaKnown RBP15.89■□□□□ 0.13
SHMT1-203ENST00000354098 LINC00467Q9BRT7 94 aa15.89■□□□□ 0.13
SHMT1-203ENST00000354098 C11orf21Q9P2W6 132 aa15.89■□□□□ 0.13
SHMT1-203ENST00000354098 NAGKQ9UJ70 344 aa15.89■□□□□ 0.13
SHMT1-203ENST00000354098 CBY3A6NI87 242 aa15.88■□□□□ 0.13
SHMT1-203ENST00000354098 TMEM263Q8WUH6 116 aaKnown RBP15.88■□□□□ 0.13
SHMT1-203ENST00000354098 WWC2-AS2Q96NR7 200 aa15.88■□□□□ 0.13
SHMT1-203ENST00000354098 MLST8Q9BVC4 326 aa15.88■□□□□ 0.13
SHMT1-203ENST00000354098 CELA1Q9UNI1 258 aa15.88■□□□□ 0.13
SHMT1-203ENST00000354098 CENPWQ5EE01 88 aa15.87■□□□□ 0.13
SHMT1-203ENST00000354098 C16orf74Q96GX8 76 aa15.87■□□□□ 0.13
SHMT1-203ENST00000354098 TRBV20OR9-2A0A075B6H5 130 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 TMEM189A5PLL7 270 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 TMEM250H0YL14 139 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 ANXA2RQ3ZCQ2 193 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 CLLU1Q5K131 121 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 FAM159AQ6UWV7 190 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 SRP19P09132 144 aaKnown RBP15.86■□□□□ 0.13
SHMT1-203ENST00000354098 CEBPGP53567 150 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 ZNF493Q6ZR52 646 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 IL17DQ8TAD2 202 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 PARLQ9H300 379 aa15.86■□□□□ 0.13
SHMT1-203ENST00000354098 PGPEP1LA6NFU8 196 aa15.85■□□□□ 0.13
SHMT1-203ENST00000354098 FABP5P3A8MUU1 101 aa15.85■□□□□ 0.13
SHMT1-203ENST00000354098 C9JQL5 133 aa15.85■□□□□ 0.13
SHMT1-203ENST00000354098 IGLV2-8P01709 118 aa15.85■□□□□ 0.13
SHMT1-203ENST00000354098 ZNF674Q2M3X9 581 aa15.85■□□□□ 0.13
SHMT1-203ENST00000354098 GNRH2O43555 120 aa15.84■□□□□ 0.13
SHMT1-203ENST00000354098 SH2D1AO60880 128 aa15.84■□□□□ 0.13
SHMT1-203ENST00000354098 GNG4P50150 75 aa15.84■□□□□ 0.13
SHMT1-203ENST00000354098 TDRG1Q3Y452 100 aa15.84■□□□□ 0.13
SHMT1-203ENST00000354098 FAM222AQ5U5X8 452 aa15.84■□□□□ 0.13
SHMT1-203ENST00000354098 C11orf72Q8NBR9 251 aa15.84■□□□□ 0.13
SHMT1-203ENST00000354098 C11orf45Q8TAV5 145 aa15.84■□□□□ 0.13
SHMT1-203ENST00000354098 GSN-AS1Q9NRJ2 163 aa15.84■□□□□ 0.13
SHMT1-203ENST00000354098 DKK2Q9UBU2 259 aa15.84■□□□□ 0.13
SHMT1-203ENST00000354098 NANOS2P60321 138 aaKnown RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms