RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 IGLC6P0CF74 106 aa11.84□□□□□ -0.51
MBD1-205ENST00000353909 IGHV4-31P0DP07 118 aa11.84□□□□□ -0.51
MBD1-205ENST00000353909 MAJINQ3KP22 176 aa11.84□□□□□ -0.51
MBD1-205ENST00000353909 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
MBD1-205ENST00000353909 NPFFR1Q9GZQ6 430 aa11.84□□□□□ -0.51
MBD1-205ENST00000353909 RBAKDNA6NC62 111 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 BRI3O95415 125 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 SRD5A1P18405 259 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 RPL11P62913 178 aaKnown RBP11.83□□□□□ -0.52
MBD1-205ENST00000353909 GATD1Q8NB37 220 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 VAMP8Q9BV40 100 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 IGKV3D-20A0A0C4DH25 116 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 FOXE3Q13461 319 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 Q5PR19 223 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 SETD2Q9BYW2 2564 aaPredicted RBP11.83□□□□□ -0.52
MBD1-205ENST00000353909 CUBNO60494 3623 aa11.83□□□□□ -0.52
MBD1-205ENST00000353909 J3KRW8 73 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 LOXL1Q08397 574 aaPredicted RBP11.82□□□□□ -0.52
MBD1-205ENST00000353909 TWIST1Q15672 202 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 TMEM78Q5T7P6 136 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 PRR9Q5T870 116 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 HIST2H2BCQ6DN03 193 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 ZNF493Q6ZR52 646 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 D6R8Y8 96 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 FAM106AQ4KMX7 169 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 TIMM8BQ9Y5J9 83 aaPredicted RBP11.82□□□□□ -0.52
MBD1-205ENST00000353909 F6UB75 175 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 SMKR1H3BMG3 65 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 PSMB8P28062 276 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 CTRLP40313 264 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 DEFB113Q30KQ7 82 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 ZNF738Q8NE65 137 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 DUX5Q96PT3 197 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 RHPN1-AS1Q9BWJ2 59 aa11.82□□□□□ -0.52
MBD1-205ENST00000353909 SOCS3O14543 225 aa11.81□□□□□ -0.52
MBD1-205ENST00000353909 FAM104BQ5XKR9 115 aa11.81□□□□□ -0.52
MBD1-205ENST00000353909 BEX4Q9NWD9 120 aaPredicted RBP11.81□□□□□ -0.52
MBD1-205ENST00000353909 A0A0G2JLM5 398 aa11.81□□□□□ -0.52
MBD1-205ENST00000353909 C9orf47Q6ZRZ4 202 aa11.81□□□□□ -0.52
MBD1-205ENST00000353909 LOC389332A0A1B0GUA5 103 aa11.8□□□□□ -0.52
MBD1-205ENST00000353909 A0A1B0GW15 77 aa11.8□□□□□ -0.52
MBD1-205ENST00000353909 J3QLI3 93 aa11.8□□□□□ -0.52
MBD1-205ENST00000353909 EREGO14944 169 aa11.8□□□□□ -0.52
MBD1-205ENST00000353909 GAS8-AS1O95177 125 aa11.8□□□□□ -0.52
MBD1-205ENST00000353909 CHCHD1Q96BP2 118 aaKnown RBP11.8□□□□□ -0.52
MBD1-205ENST00000353909 MCRIP2Q9BUT9 160 aaKnown RBP11.8□□□□□ -0.52
MBD1-205ENST00000353909 LINC01559Q495D7 138 aa11.8□□□□□ -0.52
MBD1-205ENST00000353909 MRPL51Q4U2R6 128 aaKnown RBP11.8□□□□□ -0.52
MBD1-205ENST00000353909 Q96MF0 132 aa11.8□□□□□ -0.52
MBD1-205ENST00000353909 C20orf144Q9BQM9 153 aa11.8□□□□□ -0.52
MBD1-205ENST00000353909 NCR2O95944 276 aa11.79□□□□□ -0.52
MBD1-205ENST00000353909 RPLP1P05386 114 aaKnown RBP11.79□□□□□ -0.52
MBD1-205ENST00000353909 IFI27P40305 119 aaPredicted RBP11.79□□□□□ -0.52
MBD1-205ENST00000353909 LBHQ53QV2 105 aaPredicted RBP11.79□□□□□ -0.52
MBD1-205ENST00000353909 C9orf139Q6ZV77 190 aa11.79□□□□□ -0.52
MBD1-205ENST00000353909 MRPL53Q96EL3 112 aaKnown RBP11.79□□□□□ -0.52
MBD1-205ENST00000353909 PEF1Q9UBV8 284 aaKnown RBP11.79□□□□□ -0.52
MBD1-205ENST00000353909 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
MBD1-205ENST00000353909 FSHBP01225 129 aa11.79□□□□□ -0.52
MBD1-205ENST00000353909 KIR3DS1Q14943 382 aa11.79□□□□□ -0.52
MBD1-205ENST00000353909 RPS20P60866 119 aaKnown RBP11.78□□□□□ -0.52
MBD1-205ENST00000353909 ZNF705AQ6ZN79 300 aaPredicted RBP11.78□□□□□ -0.52
MBD1-205ENST00000353909 KRTAP1-3Q8IUG1 177 aa11.78□□□□□ -0.52
MBD1-205ENST00000353909 DAZ1Q9NQZ3 744 aaKnown RBP11.78□□□□□ -0.52
MBD1-205ENST00000353909 HOXA3O43365 443 aaPredicted RBP11.78□□□□□ -0.52
MBD1-205ENST00000353909 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
MBD1-205ENST00000353909 FXYD7P58549 80 aa11.78□□□□□ -0.52
MBD1-205ENST00000353909 SPATA45Q537H7 98 aa11.78□□□□□ -0.52
MBD1-205ENST00000353909 MTORP42345 2549 aa11.78□□□□□ -0.52
MBD1-205ENST00000353909 PRELID3AQ96N28 172 aa11.78□□□□□ -0.52
MBD1-205ENST00000353909 VPREB3Q9UKI3 123 aa11.78□□□□□ -0.52
MBD1-205ENST00000353909 SPRY2O43597 315 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 OR10AG1Q8NH19 301 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 SNHG12Q9BXW3 62 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 AGRNO00468 2067 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 PCP4P48539 62 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 NUTF2P61970 127 aaKnown RBP11.77□□□□□ -0.53
MBD1-205ENST00000353909 SRSF2Q01130 221 aaKnown RBP11.77□□□□□ -0.53
MBD1-205ENST00000353909 PRSS57Q6UWY2 283 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 Q6YL49 198 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 AP5S1Q9NUS5 200 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 SIGLEC8Q9NYZ4 499 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 SMPXQ9UHP9 88 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 PDZD2O15018 2839 aa11.77□□□□□ -0.53
MBD1-205ENST00000353909 NPYP01303 97 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 ANKRD39Q53RE8 183 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 RNF185Q96GF1 192 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 TMEM70Q9BUB7 260 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 CNFNQ9BYD5 112 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 U3KQK5 164 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 H0Y8G0 127 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 WFDC3Q8IUB2 231 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 ORMDL3Q8N138 153 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 ZFAND2AQ8N6M9 145 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 MIEN1Q9BRT3 115 aa11.76□□□□□ -0.53
MBD1-205ENST00000353909 G0S2P27469 103 aa11.75□□□□□ -0.53
MBD1-205ENST00000353909 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
MBD1-205ENST00000353909 A0A096LNJ9 63 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms