RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 KLK10O43240 276 aa10.17□□□□□ -0.78
COL6A3-203ENST00000353578 C17orf100A8MU93 164 aa10.17□□□□□ -0.78
COL6A3-203ENST00000353578 ZNF474Q6S9Z5 364 aaPredicted RBP10.17□□□□□ -0.78
COL6A3-203ENST00000353578 THAP8Q8NA92 274 aa10.17□□□□□ -0.78
COL6A3-203ENST00000353578 C5orf67F2Z3F1 127 aa10.17□□□□□ -0.78
COL6A3-203ENST00000353578 LTBRP36941 435 aa10.17□□□□□ -0.78
COL6A3-203ENST00000353578 ZNF625Q96I27 306 aaPredicted RBP10.17□□□□□ -0.78
COL6A3-203ENST00000353578 WDR90Q96KV7 1748 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 IGLV3-12A0A075B6K2 115 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 RNF138Q8WVD3 245 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 SLC25A29Q8N8R3 303 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 PRR25Q96S07 402 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 FAM110AQ9BQ89 295 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 WFDC9Q8NEX5 89 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.16□□□□□ -0.78
COL6A3-203ENST00000353578 ZNF784Q8NCA9 323 aaPredicted RBP10.16□□□□□ -0.78
COL6A3-203ENST00000353578 CYYR1Q96J86 154 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 DAZ1Q9NQZ3 744 aaKnown RBP10.16□□□□□ -0.78
COL6A3-203ENST00000353578 C8orf31Q8N9H6 132 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 C1orf195Q5TG92 126 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 SELENOKQ9Y6D0 94 aa10.16□□□□□ -0.78
COL6A3-203ENST00000353578 LCNL1Q6ZST4 164 aa10.15□□□□□ -0.78
COL6A3-203ENST00000353578 DKK2Q9UBU2 259 aa10.15□□□□□ -0.78
COL6A3-203ENST00000353578 TM2D2Q9BX73 214 aa10.15□□□□□ -0.78
COL6A3-203ENST00000353578 NDUFA4L2Q9NRX3 87 aa10.15□□□□□ -0.78
COL6A3-203ENST00000353578 DAD1P61803 113 aa10.15□□□□□ -0.78
COL6A3-203ENST00000353578 PRR15LQ9BU68 103 aa10.15□□□□□ -0.78
COL6A3-203ENST00000353578 LGALS9O00182 355 aa10.15□□□□□ -0.79
COL6A3-203ENST00000353578 E9PLD3 99 aa10.15□□□□□ -0.79
COL6A3-203ENST00000353578 WFDC2Q14508 124 aa10.15□□□□□ -0.79
COL6A3-203ENST00000353578 SERP2Q8N6R1 65 aa10.14□□□□□ -0.79
COL6A3-203ENST00000353578 NKAPP1Q8N9T2 125 aa10.14□□□□□ -0.79
COL6A3-203ENST00000353578 PAX9P55771 341 aa10.14□□□□□ -0.79
COL6A3-203ENST00000353578 OPRPNQ99935 248 aaPredicted RBP10.14□□□□□ -0.79
COL6A3-203ENST00000353578 GTSF1Q8WW33 167 aa10.14□□□□□ -0.79
COL6A3-203ENST00000353578 WFDC12Q8WWY7 111 aa10.14□□□□□ -0.79
COL6A3-203ENST00000353578 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
COL6A3-203ENST00000353578 CENPVL3A0A0U1RRI6 287 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 TMEM92Q6UXU6 159 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 ZFP36L1Q07352 338 aaKnown RBP10.13□□□□□ -0.79
COL6A3-203ENST00000353578 DPH3Q96FX2 82 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 IGKV1-27A0A075B6S5 117 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 ZNF726P1Q15940 193 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 KIAA1671Q9BY89 1806 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 SMKR1H3BMG3 65 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 P0DMU3 169 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 FAM231AP0DMU4 169 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 FAM231CP0DMU5 169 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 IGKV1D-43A0A0B4J1Z2 117 aa10.13□□□□□ -0.79
COL6A3-203ENST00000353578 TRIP6Q15654 476 aaKnown RBP10.13□□□□□ -0.79
COL6A3-203ENST00000353578 IGFBP6P24592 240 aaPredicted RBP10.13□□□□□ -0.79
COL6A3-203ENST00000353578 TRBV6-1A0A0K0K1D8 114 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 SIGLEC9Q9Y336 463 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 FANCD2OSQ96PS1 177 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 A0A0U1RRA0 63 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 FOXL2NBQ6ZUU3 175 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 BRWD3Q6RI45 1802 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 VPREB1P12018 145 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 IGKV1-12A0A0C4DH73 117 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 IGKV1D-12P01611 117 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 LMO1P25800 156 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 PPIFP30405 207 aaKnown RBP10.12□□□□□ -0.79
COL6A3-203ENST00000353578 CHKB-CPT1BH3BT56 60 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 FAM216BQ8N7L0 139 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 TIMM17AQ99595 171 aa10.12□□□□□ -0.79
COL6A3-203ENST00000353578 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 ZNF134P52741 427 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 C3orf36Q3SXR2 165 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 IGKV3-20P01619 116 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 CDPF1Q6NVV7 123 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 Q8NFD4 153 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 NDUFA11Q86Y39 141 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 MUC4Q99102 2169 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 LINC00473A8K010 186 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 FXYD5Q96DB9 178 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 IGHV1-8P0DP01 117 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 FXYD2P54710 66 aa10.11□□□□□ -0.79
COL6A3-203ENST00000353578 H3BRN7 92 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 Q8N1Y9 231 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 F5H768 121 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 CEP192Q8TEP8 1941 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 SLC22A18ASQ8N1D0 253 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 ZC2HC1AQ96GY0 325 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 A0A0J9YXY3 114 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 TMEM213A2RRL7 107 aa10.1□□□□□ -0.79
COL6A3-203ENST00000353578 FAM208BQ5VWN6 2430 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 IGHV1-3A0A0C4DH29 117 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 LINC01619G3V211 115 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 GATA4P43694 442 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 ARRDC1-AS1Q9H2J1 176 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 CRIPAKQ8N1N5 446 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 Q8TAT8 98 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 TRAV3A0A0B4J244 114 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 K7EN84 100 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 PRSS22Q9GZN4 317 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 IGHV1-69P01742 117 aa10.09□□□□□ -0.79
COL6A3-203ENST00000353578 PROP1O75360 226 aa10.08□□□□□ -0.8
COL6A3-203ENST00000353578 SONP18583 2426 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms