RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TRGV3P03979 118 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 SLC25A16P16260 332 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 EMP1P54849 157 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 HES1Q14469 280 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 ATP6V0E2Q8NHE4 81 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 PRADC1Q9BSG0 188 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 F8VRH5 84 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 I3L2K1 104 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 LGALS1P09382 135 aaKnown RBP5.95□□□□□ -1.46
BRCA1-201ENST00000352993 PVRIGQ6DKI7 326 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 C1orf122Q6ZSJ8 110 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 KLHL30-AS1Q8NEE0 82 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 ONECUT1Q9UBC0 465 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 IGHV3OR16-13A0A075B7E8 117 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 IGHV3-74A0A0B4J1X5 117 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 GATA4P43694 442 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 Q1RN00 199 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 LINC01559Q495D7 138 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 SHISA2Q6UWI4 295 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 CARD19Q96LW7 228 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 LINC00574Q9H8X3 128 aa5.95□□□□□ -1.46
BRCA1-201ENST00000352993 CACNA1HO95180 2353 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 TMEM262E9PQX1 116 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 CD40P25942 277 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 ANKRD29Q8N6D5 301 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 RAX2Q96IS3 184 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 IGHV3-66A0A0C4DH42 116 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 VSTM5A8MXK1 200 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 C9JAW5 83 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 LAMTOR5O43504 91 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 TCL1BO95988 128 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 IGLC6P0CF74 106 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 VCX2Q9H322 139 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 CTSZQ9UBR2 303 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 ZNF292O60281 2723 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 TEX22C9J3V5 150 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 IGFBPL1Q8WX77 278 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 PLEKHB2Q96CS7 222 aa5.94□□□□□ -1.46
BRCA1-201ENST00000352993 BEX4Q9NWD9 120 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-201ENST00000352993 GAGE12JA6NER3 117 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 K7EIM0 57 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 SPRY2O43597 315 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 CEACAM4O75871 244 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 GAGE7O76087 117 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 GAGE12FP0CL80 117 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 GAGE12GP0CL81 117 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 GAGE12IP0CL82 117 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 IGHV1-8P0DP01 117 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 FAM27E3Q08E93 113 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 GAGE4Q13068 117 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 MRGPRG-AS1Q2M3A8 158 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 IGLV3-9A0A075B6K5 115 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 IGHV1-3A0A0C4DH29 117 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 TRBV7-9A0A0J9YWB2 115 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 MGPP08493 103 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 WT1P19544 449 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-201ENST00000352993 MFAP4P55083 255 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 IL17RELQ6ZVW7 336 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 RNF182Q8N6D2 247 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 OR11H6Q8NGC7 330 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 DYNLRB1Q9NP97 96 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 MED13LQ71F56 2210 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 M0R381 172 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 PDE6HQ13956 83 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 GFRALQ6UXV0 394 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 FDCSPQ8NFU4 85 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 CFHR4Q92496 578 aa5.93□□□□□ -1.46
BRCA1-201ENST00000352993 GVINP1Q7Z2Y8 2422 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 IGHV3-49A0A0A0MS15 119 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 CCDC179H3BU77 68 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 ZNF474Q6S9Z5 364 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-201ENST00000352993 A0A1W2PNU3 283 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-201ENST00000352993 TEX36Q5VZQ5 186 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 DYNAPQ8N1N2 210 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 C3orf56Q8N813 242 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 WDFY4Q6ZS81 3184 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 SLC25A20O43772 301 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 CLEC3BP05452 202 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 S100A4P26447 101 aaKnown RBP5.92□□□□□ -1.46
BRCA1-201ENST00000352993 TMEM155Q4W5P6 130 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 C1orf210Q8IVY1 113 aa5.92□□□□□ -1.46
BRCA1-201ENST00000352993 C17orf100A8MU93 164 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 PRAC2D3DTV9 90 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 IGHV4-39P01824 125 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 TMEM170BQ5T4T1 132 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 LINC00311Q8N616 119 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 RAB1BQ9H0U4 201 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 ARHGAP32A7KAX9 2087 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 TRAV4A0A0B4J268 109 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 IFITM1P13164 125 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 LOXP28300 417 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-201ENST00000352993 NDUFV3P56181 108 aaKnown RBP5.91□□□□□ -1.46
BRCA1-201ENST00000352993 HERVK_113P61574 105 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 DKK4Q9UBT3 224 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 ZFHX4Q86UP3 3567 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 ABCA4P78363 2273 aa5.91□□□□□ -1.46
BRCA1-201ENST00000352993 MRPS12O15235 138 aaKnown RBP5.9□□□□□ -1.46
BRCA1-201ENST00000352993 IGHG3P01860 377 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 PLA2G2CQ5R387 149 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 TRPT1Q86TN4 253 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 264 ms