RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 NRN1Q9NPD7 142 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 TRBV7-9A0A0J9YWB2 115 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 F2Z2F3 143 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 SRIP30626 198 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 CTRLP40313 264 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 CAMPP49913 170 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 PAFAH1B2P68402 229 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 S100A12P80511 92 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 HIST1H1AQ02539 215 aaPredicted RBP5.23□□□□□ -1.57
TRIM55-203ENST00000350034 SAMD13Q5VXD3 122 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 DMRTA1Q5VZB9 504 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 ZNF493Q6ZR52 646 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 APRG1Q8IVJ8 170 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 C18orf32Q8TCD1 76 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 LINC00477Q96M19 166 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 CNFNQ9BYD5 112 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 NIT2Q9NQR4 276 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 CUBNO60494 3623 aa5.23□□□□□ -1.57
TRIM55-203ENST00000350034 TGP01266 2768 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 IGHV4OR15-8A0A075B7B6 117 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 A0A087WW49 117 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 LOC102724200A0A096LPH7 203 aaPredicted RBP5.22□□□□□ -1.57
TRIM55-203ENST00000350034 DNAJC9-AS1A6NH13 148 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 ARMS2P0C7Q2 107 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 EDN2P20800 178 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 TCTEX1D4Q5JR98 221 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 TMEM78Q5T7P6 136 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 CDPF1Q6NVV7 123 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 Q6ZSV7 163 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 BAGE3Q86Y29 109 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 ZFAND2AQ8N6M9 145 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 ZNF738Q8NE65 137 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 DCANP1Q8TF63 244 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 WFDC12Q8WWY7 111 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 SSBP4Q9BWG4 385 aaPredicted RBP5.22□□□□□ -1.57
TRIM55-203ENST00000350034 TMEM160Q9NX00 188 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 C11orf21Q9P2W6 132 aa5.22□□□□□ -1.57
TRIM55-203ENST00000350034 TLN2Q9Y4G6 2542 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 IGKV3D-20A0A0C4DH25 116 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 FAM181BA6NEQ2 426 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 GPX1P07203 203 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 HOXD3P31249 432 aaPredicted RBP5.21□□□□□ -1.58
TRIM55-203ENST00000350034 IQCJQ1A5X6 159 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 HIST2H2BDQ6DRA6 164 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 LYZL1Q6UWQ5 148 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 KLHDC1Q8N7A1 406 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 FER1L6-AS1Q8NA97 138 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 OR8A1Q8NGG7 326 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 OR10J6PQ8NGY7 276 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 C4orf3Q8WVX3 66 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 URB1-AS1Q96HZ7 61 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 KCNS1Q96KK3 526 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 RCHY1Q96PM5 261 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 DUX5Q96PT3 197 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 ESM1Q9NQ30 184 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 YAE1D1Q9NRH1 226 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 U3KQK5 164 aa5.21□□□□□ -1.58
TRIM55-203ENST00000350034 IGHV4-4A0A075B6R2 117 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 TMSB15BA0A087X1C1 80 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 C2orf70A6NJV1 201 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 K7EQG2 157 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 ZNF324O75467 553 aaPredicted RBP5.2□□□□□ -1.58
TRIM55-203ENST00000350034 ID1P41134 155 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 SYNJ2BPP57105 145 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 PRR9Q5T870 116 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 ADAMTSL5Q6ZMM2 481 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 C18orf65Q6ZTR6 163 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 Q6ZWC4 215 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 BORCS7Q96B45 105 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 C16orf95Q9H693 158 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 GSN-AS1Q9NRJ2 163 aa5.2□□□□□ -1.58
TRIM55-203ENST00000350034 KLLNB2CW77 178 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 LINC01619G3V211 115 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 SNAI2O43623 268 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 ORM1P02763 201 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 RNASE1P07998 156 aaKnown RBP5.19□□□□□ -1.58
TRIM55-203ENST00000350034 ZNF705DP0CH99 300 aaPredicted RBP5.19□□□□□ -1.58
TRIM55-203ENST00000350034 ZNF705BP0CI00 300 aaPredicted RBP5.19□□□□□ -1.58
TRIM55-203ENST00000350034 DEFB1P60022 68 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 RPL11P62913 178 aaKnown RBP5.19□□□□□ -1.58
TRIM55-203ENST00000350034 PRR31Q5SQ13 230 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 FAM104BQ5XKR9 115 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 NIT1Q86X76 327 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 ODF3Q96PU9 254 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 MS4A6AQ9H2W1 248 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 RYR3Q15413 4870 aa5.19□□□□□ -1.58
TRIM55-203ENST00000350034 TRAV2A0A0B4J234 112 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 TRAV21A0A0B4J279 112 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 PCP4L1A6NKN8 68 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 F6UB75 175 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 OR5AL1P0C617 328 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 MED14OSP0DP75 135 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 SRD5A1P18405 259 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 AMTP48728 403 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 SLURP1P55000 103 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 Q6ZQT7 251 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 Q8N976 141 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 OR1N2Q8NGR9 330 aa5.18□□□□□ -1.58
TRIM55-203ENST00000350034 CHCHD1Q96BP2 118 aaKnown RBP5.18□□□□□ -1.58
TRIM55-203ENST00000350034 RNF185Q96GF1 192 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms