RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 LRBAP50851 2863 aa11.87□□□□□ -0.51
PTBP1-201ENST00000349038 CCDC179H3BU77 68 aa11.86□□□□□ -0.51
PTBP1-201ENST00000349038 GAGE5Q13069 117 aa11.86□□□□□ -0.51
PTBP1-201ENST00000349038 GAGE6Q13070 117 aa11.86□□□□□ -0.51
PTBP1-201ENST00000349038 TMEM200BQ69YZ2 307 aa11.86□□□□□ -0.51
PTBP1-201ENST00000349038 Q6ZQT7 251 aa11.86□□□□□ -0.51
PTBP1-201ENST00000349038 TM4SF5O14894 197 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 RNF182Q8N6D2 247 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 DPF1Q92782 380 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 ONECUT1Q9UBC0 465 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 LINC00312Q9Y6C7 94 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 SLC25A16P16260 332 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 SRSF6Q13247 344 aaKnown RBP11.85□□□□□ -0.51
PTBP1-201ENST00000349038 SIGLEC15Q6ZMC9 328 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 TRGV9Q99603 122 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 TM2D2Q9BX73 214 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 RNF125Q96EQ8 232 aa11.85□□□□□ -0.51
PTBP1-201ENST00000349038 DTX2Q86UW9 622 aa11.84□□□□□ -0.51
PTBP1-201ENST00000349038 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
PTBP1-201ENST00000349038 NACAE9PAV3 2078 aa11.84□□□□□ -0.51
PTBP1-201ENST00000349038 IGLV3-9A0A075B6K5 115 aa11.84□□□□□ -0.51
PTBP1-201ENST00000349038 C9JAW5 83 aa11.84□□□□□ -0.51
PTBP1-201ENST00000349038 IGHV4-39P01824 125 aa11.84□□□□□ -0.51
PTBP1-201ENST00000349038 GLRXP35754 106 aa11.84□□□□□ -0.51
PTBP1-201ENST00000349038 SPANXN1Q5VSR9 72 aa11.84□□□□□ -0.51
PTBP1-201ENST00000349038 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
PTBP1-201ENST00000349038 IGKV3-7A0A075B6H7 116 aa11.83□□□□□ -0.51
PTBP1-201ENST00000349038 M0R381 172 aa11.83□□□□□ -0.51
PTBP1-201ENST00000349038 IGKV1-17P01599 117 aa11.83□□□□□ -0.51
PTBP1-201ENST00000349038 GAGE2BQ13066 116 aa11.83□□□□□ -0.51
PTBP1-201ENST00000349038 GAGE2EQ4V326 116 aa11.83□□□□□ -0.51
PTBP1-201ENST00000349038 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.51
PTBP1-201ENST00000349038 PRO0461Q9UI25 63 aa11.83□□□□□ -0.51
PTBP1-201ENST00000349038 SNCGO76070 127 aa11.83□□□□□ -0.52
PTBP1-201ENST00000349038 IGHV1-46P01743 117 aa11.83□□□□□ -0.52
PTBP1-201ENST00000349038 TMEM78Q5T7P6 136 aa11.83□□□□□ -0.52
PTBP1-201ENST00000349038 MORN3Q6PF18 240 aaPredicted RBP11.83□□□□□ -0.52
PTBP1-201ENST00000349038 ARRDC1-AS1Q9H2J1 176 aa11.83□□□□□ -0.52
PTBP1-201ENST00000349038 MGPP08493 103 aa11.83□□□□□ -0.52
PTBP1-201ENST00000349038 CD59P13987 128 aa11.83□□□□□ -0.52
PTBP1-201ENST00000349038 SCGB3A1Q96QR1 104 aa11.83□□□□□ -0.52
PTBP1-201ENST00000349038 CLEC3BP05452 202 aa11.82□□□□□ -0.52
PTBP1-201ENST00000349038 KLRD1Q13241 179 aa11.82□□□□□ -0.52
PTBP1-201ENST00000349038 TMEM155Q4W5P6 130 aa11.82□□□□□ -0.52
PTBP1-201ENST00000349038 ANKRD29Q8N6D5 301 aa11.82□□□□□ -0.52
PTBP1-201ENST00000349038 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
PTBP1-201ENST00000349038 A8MWV9 139 aa11.82□□□□□ -0.52
PTBP1-201ENST00000349038 OVOL3O00110 214 aa11.82□□□□□ -0.52
PTBP1-201ENST00000349038 FAM27E3Q08E93 113 aa11.82□□□□□ -0.52
PTBP1-201ENST00000349038 Q6AWC8 147 aa11.82□□□□□ -0.52
PTBP1-201ENST00000349038 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
PTBP1-201ENST00000349038 RAI1Q7Z5J4 1906 aaPredicted RBP11.82□□□□□ -0.52
PTBP1-201ENST00000349038 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 TRBV7-9A0A0J9YWB2 115 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 LYNX1G3V0Z9 82 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 LYNX1P0DP58 116 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 AJUBAQ96IF1 538 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 PRADC1Q9BSG0 188 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 TCL1BO95988 128 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 CFAP126Q5VTH2 177 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 C22orf34Q6ZV56 151 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 HIGD1BQ9P298 99 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 MYMXA0A1B0GTQ4 84 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 CRLF1O75462 422 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 IGLV2-23P01705 113 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 PPP1R27Q86WC6 154 aa11.81□□□□□ -0.52
PTBP1-201ENST00000349038 PRR25Q96S07 402 aa11.8□□□□□ -0.52
PTBP1-201ENST00000349038 NDUFB3O43676 98 aa11.8□□□□□ -0.52
PTBP1-201ENST00000349038 ATP5LO75964 103 aa11.8□□□□□ -0.52
PTBP1-201ENST00000349038 TSPAN13O95857 204 aa11.8□□□□□ -0.52
PTBP1-201ENST00000349038 SEM1Q6ZVN7 128 aa11.8□□□□□ -0.52
PTBP1-201ENST00000349038 NXT2Q9NPJ8 142 aaKnown RBP11.8□□□□□ -0.52
PTBP1-201ENST00000349038 CRIP2P52943 208 aaPredicted RBP11.79□□□□□ -0.52
PTBP1-201ENST00000349038 TEX36Q5VZQ5 186 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 ASCL5Q7RTU5 278 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 PPDPFLQ8WWR9 84 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 RNF185Q96GF1 192 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 CRYGCP07315 174 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 LAGE3Q14657 143 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 TMEM170BQ5T4T1 132 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 IL17RELQ6ZVW7 336 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 FDCSPQ8NFU4 85 aa11.79□□□□□ -0.52
PTBP1-201ENST00000349038 PVRIGQ6DKI7 326 aa11.78□□□□□ -0.52
PTBP1-201ENST00000349038 FAM159AQ6UWV7 190 aa11.78□□□□□ -0.52
PTBP1-201ENST00000349038 ZNF493Q6ZR52 646 aa11.78□□□□□ -0.52
PTBP1-201ENST00000349038 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
PTBP1-201ENST00000349038 LGALS1P09382 135 aaKnown RBP11.78□□□□□ -0.52
PTBP1-201ENST00000349038 NPC2P61916 151 aa11.78□□□□□ -0.52
PTBP1-201ENST00000349038 ZNF491Q8N8L2 437 aa11.78□□□□□ -0.52
PTBP1-201ENST00000349038 SIGLEC9Q9Y336 463 aa11.78□□□□□ -0.52
PTBP1-201ENST00000349038 SPG11Q96JI7 2443 aa11.78□□□□□ -0.52
PTBP1-201ENST00000349038 ZNF688P0C7X2 276 aa11.77□□□□□ -0.52
PTBP1-201ENST00000349038 IGFL2Q6UWQ7 119 aa11.77□□□□□ -0.52
PTBP1-201ENST00000349038 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.52
PTBP1-201ENST00000349038 MRGPRG-AS1Q2M3A8 158 aa11.77□□□□□ -0.53
PTBP1-201ENST00000349038 PLA2G2CQ5R387 149 aa11.77□□□□□ -0.53
PTBP1-201ENST00000349038 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
PTBP1-201ENST00000349038 MBD3L4A6NDZ8 208 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms