RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 TICRRQ7Z2Z1 1910 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 SMKR1H3BMG3 65 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 CFPP27918 469 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 Q6Q795 121 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 RNF152Q8N8N0 203 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 hADV29S1A0JD25 119 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 K7ENP7 123 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 Q8N8P6 123 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 TRGV11A0A075B6L2 103 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 XGP55808 180 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 MLANAQ16655 118 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 MINOS1Q5TGZ0 78 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 MINOS1-NBL1R4GNA1 71 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 OVOL1O14753 267 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 PFN2P35080 140 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 UBE2DNLQ8IWF7 75 aa8.88□□□□□ -0.99
SMARCE1-202ENST00000348513 TCRAP04437 139 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 LINC01356Q8N9X3 169 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 ETV2O00321 342 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 WISP1O95388 367 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 CACNA1BQ00975 2339 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 PHF3Q92576 2039 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 TRGV1A0A0A0MS02 117 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 IGKV3D-7A0A0C4DH55 119 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 LY6G6EA0A0G2JKS1 128 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 SRRM4A7MD48 611 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 M0R1W7 72 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 U3KQA8 63 aa8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 RIF1Q5UIP0 2472 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-202ENST00000348513 IGKV1-16P04430 117 aa8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 SIGLEC9Q9Y336 463 aa8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 TIMM21Q9BVV7 248 aa8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 HEATR1Q9H583 2144 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 E9PLD3 99 aa8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 IL17RELQ6ZVW7 336 aa8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 SIP14410 1827 aa8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 ATP5EP56381 51 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 MRPL35Q9NZE8 188 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 A0A087WX48 190 aa8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 PLA2G2EQ9NZK7 142 aa8.86□□□□□ -0.99
SMARCE1-202ENST00000348513 YLPM1P49750 1951 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 PI4KAP42356 2102 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 FAM104BQ5XKR9 115 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 Q96MF0 132 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 ARMS2P0C7Q2 107 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 TEX36Q5VZQ5 186 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 LINC00173Q6ZV60 143 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 TRBV19A0A075B6N1 114 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 COX7CP15954 63 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 SPTBN1Q01082 2364 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 TRBV7-1A0A0A6YYK4 115 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 A0A0G2JRQ6 117 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 F6UB75 175 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 HAMPP81172 84 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 ZNF493Q6ZR52 646 aa8.85□□□□□ -0.99
SMARCE1-202ENST00000348513 RLFQ13129 1914 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 K7EMI3 77 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 SH2D1AO60880 128 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 BAALC-AS2P0C853 105 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 TNRC6AQ8NDV7 1962 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 MGAMO43451 1857 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 QRFPP83859 136 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 PLXNA3P51805 1871 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 H3BT86 120 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 ERCC8Q13216 396 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 JPT2Q9H910 190 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 ANAPC10Q9UM13 185 aa8.84□□□□□ -0.99
SMARCE1-202ENST00000348513 RBAKDNA6NC62 111 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 OVOL3O00110 214 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 Q86TA4 180 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 TMEM141Q96I45 108 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 TRGV9Q99603 122 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 DIDO1Q9BTC0 2240 aaKnown RBP8.83□□□□□ -1
SMARCE1-202ENST00000348513 KIAA2026Q5HYC2 2103 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 Q8N1Y9 231 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 GTSF1Q8WW33 167 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 RHPN1-AS1Q9BWJ2 59 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 CHD3Q12873 2000 aaKnown RBP8.83□□□□□ -1
SMARCE1-202ENST00000348513 PRSS46E5RG02 174 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 C11orf52Q96A22 123 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 IMUPQ9GZP8 106 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 OOSP1A8MZH6 123 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 MSMBP08118 114 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 ZNF876PQ49A33 203 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 PRORYQ9H606 182 aa8.83□□□□□ -1
SMARCE1-202ENST00000348513 ROS1P08922 2347 aa8.82□□□□□ -1
SMARCE1-202ENST00000348513 F8VRH5 84 aa8.82□□□□□ -1
SMARCE1-202ENST00000348513 TCL1BO95988 128 aa8.82□□□□□ -1
SMARCE1-202ENST00000348513 FHL1Q13642 323 aa8.82□□□□□ -1
SMARCE1-202ENST00000348513 ICOSQ9Y6W8 199 aa8.82□□□□□ -1
SMARCE1-202ENST00000348513 TRAV12-1A0A0B4J245 112 aa8.82□□□□□ -1
SMARCE1-202ENST00000348513 J3QLI3 93 aa8.82□□□□□ -1
SMARCE1-202ENST00000348513 IL15RAQ13261 267 aa8.82□□□□□ -1
SMARCE1-202ENST00000348513 MRPL51Q4U2R6 128 aaKnown RBP8.82□□□□□ -1
SMARCE1-202ENST00000348513 TRPT1Q86TN4 253 aaKnown RBP8.82□□□□□ -1
SMARCE1-202ENST00000348513 PROK2Q9HC23 129 aa8.82□□□□□ -1
SMARCE1-202ENST00000348513 GPR179Q6PRD1 2367 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms