RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PKDREJQ9NTG1 2253 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 VCYO14598 125 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 GDF5OSQ5U4N7 250 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 ZGRF1Q86YA3 2104 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 K7EIM0 57 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 TAX1BP3O14907 124 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.56
NUP50-201ENST00000347635 C8orf86Q6ZUL3 223 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 DEFB104AQ8WTQ1 72 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 LINC00574Q9H8X3 128 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 GTF3C1Q12789 2109 aa11.58□□□□□ -0.56
NUP50-201ENST00000347635 IGHV4-39P01824 125 aa11.57□□□□□ -0.56
NUP50-201ENST00000347635 TMEM262E9PQX1 116 aa11.57□□□□□ -0.56
NUP50-201ENST00000347635 SPTBN1Q01082 2364 aaKnown RBP11.57□□□□□ -0.56
NUP50-201ENST00000347635 NCKAP5O14513 1909 aa11.57□□□□□ -0.56
NUP50-201ENST00000347635 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
NUP50-201ENST00000347635 PCP2Q8IVA1 136 aa11.57□□□□□ -0.56
NUP50-201ENST00000347635 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 TEX22C9J3V5 150 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 CD28P10747 220 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 ANKRD39Q53RE8 183 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 MYMXA0A1B0GTQ4 84 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 CTRLP40313 264 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 Q8N7P7 452 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 BPTFQ12830 3046 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 K7ERJ3 54 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 C2orf66Q6UXQ4 117 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 STHQ8IWL8 128 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 ERG28Q9UKR5 140 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 TRGV11A0A075B6L2 103 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 F8W1H4 67 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 CRYGCP07315 174 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 RUSC1-AS1Q66K80 236 aa11.56□□□□□ -0.56
NUP50-201ENST00000347635 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 DYNAPQ8N1N2 210 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 MBD6Q96DN6 1003 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 TRBV6-1A0A0K0K1D8 114 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 TAL2Q16559 108 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 TMEM238C9JI98 176 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 G3V318 75 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 OR11H6Q8NGC7 330 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 CRXO43186 299 aaPredicted RBP11.55□□□□□ -0.56
NUP50-201ENST00000347635 ABCA4P78363 2273 aa11.55□□□□□ -0.56
NUP50-201ENST00000347635 EMP1P54849 157 aa11.54□□□□□ -0.56
NUP50-201ENST00000347635 USF3Q68DE3 2245 aa11.54□□□□□ -0.56
NUP50-201ENST00000347635 PRB1P04280 392 aa11.54□□□□□ -0.56
NUP50-201ENST00000347635 LINC00322Q6ZN03 302 aaPredicted RBP11.54□□□□□ -0.56
NUP50-201ENST00000347635 NPBQ8NG41 125 aa11.54□□□□□ -0.56
NUP50-201ENST00000347635 RHPN1-AS1Q9BWJ2 59 aa11.54□□□□□ -0.56
NUP50-201ENST00000347635 FCN3O75636 299 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 SMIM2Q9BVW6 85 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.53□□□□□ -0.56
NUP50-201ENST00000347635 CFHR4Q92496 578 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 PCNX1Q96RV3 2341 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 A0A087WWL8 130 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 A0A087WX48 190 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 RBAKDNA6NC62 111 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 HLA-DRB4P13762 266 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 NSUN5P1Q3KNT7 163 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 HLA-DRB4X5D2U9 266 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 WI2-2373I1.2A0A1W2PRP0 233 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 C10orf105Q8TEF2 133 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 TP53TG1Q9Y2A0 90 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 F8VRH5 84 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 H3BUA1 57 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 PLEKHB2Q96CS7 222 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 ANAPC13Q9BS18 74 aa11.53□□□□□ -0.56
NUP50-201ENST00000347635 BDP1A6H8Y1 2624 aa11.52□□□□□ -0.56
NUP50-201ENST00000347635 LINC01587Q99440 93 aa11.52□□□□□ -0.56
NUP50-201ENST00000347635 SPTAN1Q13813 2472 aaKnown RBP11.52□□□□□ -0.57
NUP50-201ENST00000347635 IGLV11-55A0A075B6I3 123 aa11.52□□□□□ -0.57
NUP50-201ENST00000347635 CKS1BP61024 79 aa11.52□□□□□ -0.57
NUP50-201ENST00000347635 TSSC4Q9Y5U2 329 aaPredicted RBP11.52□□□□□ -0.57
NUP50-201ENST00000347635 DNAH12Q6ZR08 3092 aa11.52□□□□□ -0.57
NUP50-201ENST00000347635 MED12LQ86YW9 2145 aa11.52□□□□□ -0.57
NUP50-201ENST00000347635 MLST8Q9BVC4 326 aa11.52□□□□□ -0.57
NUP50-201ENST00000347635 POLEQ07864 2286 aa11.52□□□□□ -0.57
NUP50-201ENST00000347635 IGLV1-47P01700 117 aa11.51□□□□□ -0.57
NUP50-201ENST00000347635 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
NUP50-201ENST00000347635 TRAV8-4A0A0B4J246 113 aa11.51□□□□□ -0.57
NUP50-201ENST00000347635 TSPAN13O95857 204 aa11.51□□□□□ -0.57
NUP50-201ENST00000347635 KLHL30-AS1Q8NEE0 82 aa11.51□□□□□ -0.57
NUP50-201ENST00000347635 TMEM141Q96I45 108 aa11.51□□□□□ -0.57
NUP50-201ENST00000347635 ZNF688P0C7X2 276 aa11.5□□□□□ -0.57
NUP50-201ENST00000347635 HOXB4P17483 251 aaPredicted RBP11.5□□□□□ -0.57
NUP50-201ENST00000347635 ZNF876PQ49A33 203 aa11.5□□□□□ -0.57
NUP50-201ENST00000347635 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
NUP50-201ENST00000347635 GATA1P15976 413 aaPredicted RBP11.5□□□□□ -0.57
NUP50-201ENST00000347635 IGFBPL1Q8WX77 278 aa11.5□□□□□ -0.57
NUP50-201ENST00000347635 ANXA2RQ3ZCQ2 193 aa11.5□□□□□ -0.57
NUP50-201ENST00000347635 ETDBQ3ZM63 59 aa11.5□□□□□ -0.57
NUP50-201ENST00000347635 PRADC1Q9BSG0 188 aa11.5□□□□□ -0.57
NUP50-201ENST00000347635 SAP30O75446 220 aa11.5□□□□□ -0.57
NUP50-201ENST00000347635 MSRB1Q9NZV6 116 aa11.5□□□□□ -0.57
NUP50-201ENST00000347635 TNRC6AQ8NDV7 1962 aaKnown RBP11.49□□□□□ -0.57
NUP50-201ENST00000347635 CADP27708 2225 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 PMVKQ15126 192 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 337.2 ms