RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SRSF2Q01130 221 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP1-202ENST00000346416 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 MYOZ3Q8TDC0 251 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 PPP1R14DQ9NXH3 145 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 UFC1Q9Y3C8 167 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 MUC21A0A0G2JKD1 596 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 MUC21A0A140T8X8 626 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 LBHQ53QV2 105 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 MUC21Q5SSG8 566 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 FAM19A2Q8N3H0 131 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 FER1L6-AS1Q8NA97 138 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 ACANP16112 2415 aa10.7□□□□□ -0.7
CDK5RAP1-202ENST00000346416 GCN1Q92616 2671 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 KIR2DL5BA0A0G2JN68 375 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 KIR2DL5BA0A0G2JPC4 375 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 TMEM213A2RRL7 107 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 FAM181BA6NEQ2 426 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 LGALS1P09382 135 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 IGLC6P0CF74 106 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 SRD5A1P18405 259 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 CTRLP40313 264 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 KIR2DL5AQ8N109 375 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 Q8N2B8 174 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 UBE2E2Q96LR5 201 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 OVOL1O14753 267 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 NTF3P20783 257 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 DEFB1P60022 68 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 HIST1H1AQ02539 215 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 RNASEKQ6P5S7 137 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 TEX43Q6ZNM6 134 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 ZNF493Q6ZR52 646 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 RNF152Q8N8N0 203 aa10.69□□□□□ -0.7
CDK5RAP1-202ENST00000346416 HSBP1O75506 76 aa10.68□□□□□ -0.7
CDK5RAP1-202ENST00000346416 NIT1Q86X76 327 aa10.68□□□□□ -0.7
CDK5RAP1-202ENST00000346416 TEX29Q8N6K0 151 aa10.68□□□□□ -0.7
CDK5RAP1-202ENST00000346416 OR10J6PQ8NGY7 276 aa10.68□□□□□ -0.7
CDK5RAP1-202ENST00000346416 LINC00477Q96M19 166 aa10.68□□□□□ -0.7
CDK5RAP1-202ENST00000346416 C11orf21Q9P2W6 132 aa10.68□□□□□ -0.7
CDK5RAP1-202ENST00000346416 RNF114Q9Y508 228 aa10.68□□□□□ -0.7
CDK5RAP1-202ENST00000346416 NF1P21359 2839 aa10.67□□□□□ -0.7
CDK5RAP1-202ENST00000346416 IGKV3D-20A0A0C4DH25 116 aa10.67□□□□□ -0.7
CDK5RAP1-202ENST00000346416 URB1-AS1Q96HZ7 61 aa10.67□□□□□ -0.7
CDK5RAP1-202ENST00000346416 LENEPQ9Y5L5 61 aa10.67□□□□□ -0.7
CDK5RAP1-202ENST00000346416 IGHV4OR15-8A0A075B7B6 117 aa10.67□□□□□ -0.7
CDK5RAP1-202ENST00000346416 A0A087WW49 117 aa10.67□□□□□ -0.7
CDK5RAP1-202ENST00000346416 M0QZ24 198 aa10.67□□□□□ -0.7
CDK5RAP1-202ENST00000346416 SYNJ2BPP57105 145 aa10.67□□□□□ -0.7
CDK5RAP1-202ENST00000346416 F6UB75 175 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 KRTDAPP60985 99 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 TWIST1Q15672 202 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 PRR9Q5T870 116 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 Q6ZQT7 251 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 TMEM86BQ8N661 226 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 HOXD3P31249 432 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 KLHDC1Q8N7A1 406 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 OR8A1Q8NGG7 326 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 DCANP1Q8TF63 244 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 VAMP8Q9BV40 100 aa10.66□□□□□ -0.7
CDK5RAP1-202ENST00000346416 AKAP9Q99996 3911 aa10.65□□□□□ -0.7
CDK5RAP1-202ENST00000346416 FAM104BQ5XKR9 115 aa10.65□□□□□ -0.7
CDK5RAP1-202ENST00000346416 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
CDK5RAP1-202ENST00000346416 AMN1Q8IY45 258 aa10.65□□□□□ -0.7
CDK5RAP1-202ENST00000346416 FOXC2Q99958 501 aa10.65□□□□□ -0.7
CDK5RAP1-202ENST00000346416 CNFNQ9BYD5 112 aa10.65□□□□□ -0.7
CDK5RAP1-202ENST00000346416 ZMAT5Q9UDW3 170 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP1-202ENST00000346416 J3KRW8 73 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 M0R2Z0 102 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 LGALS9O00182 355 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 ZFAND2AQ8N6M9 145 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 MSRB1Q9NZV6 116 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 LINC00614P0C842 121 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 ID1P41134 155 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 KRTAP1-1Q07627 177 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 CHCHD1Q96BP2 118 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 C2orf88Q9BSF0 95 aa10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 FASNP49327 2511 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP1-202ENST00000346416 DNAJC9-AS1A6NH13 148 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 SAMD13Q5VXD3 122 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 C18orf65Q6ZTR6 163 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 MS4A6AQ9H2W1 248 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 HECTD1Q9ULT8 2610 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 MTORP42345 2549 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 D6R8Y8 96 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 CSN3P07498 182 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 C3orf79P0CE67 100 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 PMCHL1Q16048 86 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 DEFB136Q30KP8 78 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 FAM19A4Q96LR4 140 aa10.63□□□□□ -0.71
CDK5RAP1-202ENST00000346416 TFPI2P48307 235 aa10.62□□□□□ -0.71
CDK5RAP1-202ENST00000346416 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP1-202ENST00000346416 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
CDK5RAP1-202ENST00000346416 CUBNO60494 3623 aa10.62□□□□□ -0.71
CDK5RAP1-202ENST00000346416 C2orf70A6NJV1 201 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 CD5LO43866 347 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 TCTEX1D4Q5JR98 221 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 Q6ZSV7 163 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 Q8N976 141 aa10.61□□□□□ -0.71
CDK5RAP1-202ENST00000346416 YAE1D1Q9NRH1 226 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms