RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 HOXA3O43365 443 aaPredicted RBP10.33□□□□□ -0.76
CASC4-202ENST00000345795 RPLP1P05386 114 aaKnown RBP10.33□□□□□ -0.76
CASC4-202ENST00000345795 SAPCD1Q5SSQ6 148 aa10.33□□□□□ -0.76
CASC4-202ENST00000345795 PRR25Q96S07 402 aa10.33□□□□□ -0.76
CASC4-202ENST00000345795 TMEM191AQ9H0A3 160 aa10.33□□□□□ -0.76
CASC4-202ENST00000345795 TRAV8-6A0A0B4J262 113 aa10.33□□□□□ -0.76
CASC4-202ENST00000345795 REC114Q7Z4M0 266 aa10.33□□□□□ -0.76
CASC4-202ENST00000345795 KLHDC1Q8N7A1 406 aa10.33□□□□□ -0.76
CASC4-202ENST00000345795 MRGPRG-AS1Q2M3A8 158 aa10.32□□□□□ -0.76
CASC4-202ENST00000345795 TYMSP04818 313 aa10.32□□□□□ -0.76
CASC4-202ENST00000345795 TP53TG3Q9ULZ0 132 aa10.32□□□□□ -0.76
CASC4-202ENST00000345795 SMIM27A0A1W2PRY6 76 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 LY6G5BQ8NDX9 201 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 AGPAT4-IT1Q9H0P7 198 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 MRPL27Q9P0M9 148 aaKnown RBP10.31□□□□□ -0.76
CASC4-202ENST00000345795 ZMAT5Q9UDW3 170 aaKnown RBP10.31□□□□□ -0.76
CASC4-202ENST00000345795 KLF2Q9Y5W3 355 aaPredicted RBP10.31□□□□□ -0.76
CASC4-202ENST00000345795 NUDT3O95989 172 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 PTTG1IPP53801 180 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 ORMDL3Q8N138 153 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 RNF5Q99942 180 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 ALKBH7Q9BT30 221 aaPredicted RBP10.31□□□□□ -0.76
CASC4-202ENST00000345795 ZFP30Q9Y2G7 519 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 MGAM2Q2M2H8 2515 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 YPEL3P61236 119 aaPredicted RBP10.31□□□□□ -0.76
CASC4-202ENST00000345795 ZNF502Q8TBZ5 544 aa10.31□□□□□ -0.76
CASC4-202ENST00000345795 TRBV9A0A0B4J1U6 114 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 PSMB11A5LHX3 300 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 LY6LH3BQJ8 138 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 K7EMI3 77 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 PRM2P04554 102 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 FAM159AQ6UWV7 190 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 FAM110DQ8TAY7 271 aaPredicted RBP10.3□□□□□ -0.76
CASC4-202ENST00000345795 CCDC140Q96MF4 163 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 MAST4O15021 2626 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 TCF21O43680 179 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 CRYGCP07315 174 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 CRYGBP07316 175 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 LEPP41159 167 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 LOXL1Q08397 574 aaPredicted RBP10.3□□□□□ -0.76
CASC4-202ENST00000345795 ZNF56Q15929 161 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 C10orf105Q8TEF2 133 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 GNRH2O43555 120 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 C5orf56Q8N8D9 126 aa10.3□□□□□ -0.76
CASC4-202ENST00000345795 LTAP01374 205 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 EBLN2Q6P2I7 272 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 FOXC2Q99958 501 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 A0A087X0K7 114 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 NDUFA3O95167 84 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 COX19Q49B96 90 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 IGHV3-64A0A075B6Q5 118 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 GAS8-AS1O95177 125 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 TTC9CQ8N5M4 171 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 SNHG12Q9BXW3 62 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 TTTY13Q9BZ97 58 aa10.29□□□□□ -0.76
CASC4-202ENST00000345795 IGKV3OR2-268A0A0C4DH90 116 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 A8MWP6 167 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 AJUBAQ96IF1 538 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 UBE2E2Q96LR5 201 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 NBEAL1Q6ZS30 2694 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 ODF3BA8MYP8 253 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 NPYP01303 97 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 NSUN5P1Q3KNT7 163 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 MAP1LC3AQ9H492 121 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 CRIP1P50238 77 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 RAB9AP51151 201 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 HSPB8Q9UJY1 196 aa10.28□□□□□ -0.76
CASC4-202ENST00000345795 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.76
CASC4-202ENST00000345795 IGHV1-24A0A0C4DH33 117 aa10.27□□□□□ -0.76
CASC4-202ENST00000345795 C8orf31Q8N9H6 132 aa10.27□□□□□ -0.76
CASC4-202ENST00000345795 NPBQ8NG41 125 aa10.27□□□□□ -0.76
CASC4-202ENST00000345795 BUB3O43684 328 aa10.27□□□□□ -0.77
CASC4-202ENST00000345795 IGLC2P0DOY2 106 aa10.27□□□□□ -0.77
CASC4-202ENST00000345795 ZNF124Q15973 351 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 JMJD8Q96S16 334 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 GOLT1BQ9Y3E0 138 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 A0A0G2JLM5 398 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 IGHV3-53P01767 116 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 KLHL30-AS1Q8NEE0 82 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 UQCR10Q9UDW1 63 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 LY96Q9Y6Y9 160 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 GCSHP23434 173 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 WFDC11Q8NEX6 87 aa10.26□□□□□ -0.77
CASC4-202ENST00000345795 SLURP1P55000 103 aa10.25□□□□□ -0.77
CASC4-202ENST00000345795 MRPL51Q4U2R6 128 aaKnown RBP10.25□□□□□ -0.77
CASC4-202ENST00000345795 OOSP1A8MZH6 123 aa10.25□□□□□ -0.77
CASC4-202ENST00000345795 IGLL1P15814 213 aa10.25□□□□□ -0.77
CASC4-202ENST00000345795 LINC01356Q8N9X3 169 aa10.25□□□□□ -0.77
CASC4-202ENST00000345795 JPT2Q9H910 190 aa10.25□□□□□ -0.77
CASC4-202ENST00000345795 MPV17L2Q567V2 206 aa10.25□□□□□ -0.77
CASC4-202ENST00000345795 OR10J3Q5JRS4 329 aa10.25□□□□□ -0.77
CASC4-202ENST00000345795 C18orf65Q6ZTR6 163 aa10.25□□□□□ -0.77
CASC4-202ENST00000345795 UNC79Q9P2D8 2635 aa10.25□□□□□ -0.77
CASC4-202ENST00000345795 TRBV7-1A0A0A6YYK4 115 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 LINC00310P59036 64 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 GTSCR1Q86UQ5 136 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 PEF1Q9UBV8 284 aaKnown RBP10.24□□□□□ -0.77
CASC4-202ENST00000345795 SMAD5-AS1Q9Y6J3 95 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1059.1 ms