RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 FABP5P3A8MUU1 101 aa13.78□□□□□ -0.2
VHL-202ENST00000345392 H3BMG7 143 aa13.78□□□□□ -0.2
VHL-202ENST00000345392 AMTNQ6UX39 209 aa13.78□□□□□ -0.2
VHL-202ENST00000345392 SH2D6Q7Z4S9 175 aa13.78□□□□□ -0.2
VHL-202ENST00000345392 TSSC4Q9Y5U2 329 aaPredicted RBP13.78□□□□□ -0.2
VHL-202ENST00000345392 LINC01546A6NGU7 62 aa13.77□□□□□ -0.2
VHL-202ENST00000345392 CIDEAO60543 219 aa13.77□□□□□ -0.2
VHL-202ENST00000345392 TRGV3P03979 118 aa13.77□□□□□ -0.2
VHL-202ENST00000345392 NDPQ00604 133 aa13.77□□□□□ -0.2
VHL-202ENST00000345392 KLRD1Q13241 179 aa13.77□□□□□ -0.2
VHL-202ENST00000345392 RNF182Q8N6D2 247 aa13.77□□□□□ -0.2
VHL-202ENST00000345392 PSMG3-AS1Q96PY0 264 aa13.77□□□□□ -0.2
VHL-202ENST00000345392 TM2D2Q9BX73 214 aa13.77□□□□□ -0.2
VHL-202ENST00000345392 IGLL5B9A064 214 aa13.77□□□□□ -0.21
VHL-202ENST00000345392 FAM90A27PA6NNH2 459 aa13.76□□□□□ -0.21
VHL-202ENST00000345392 IL17RELQ6ZVW7 336 aa13.76□□□□□ -0.21
VHL-202ENST00000345392 CFHR4Q92496 578 aa13.76□□□□□ -0.21
VHL-202ENST00000345392 SIGMAR1Q99720 223 aa13.76□□□□□ -0.21
VHL-202ENST00000345392 CNFNQ9BYD5 112 aa13.76□□□□□ -0.21
VHL-202ENST00000345392 CHTOPQ9Y3Y2 248 aaKnown RBP13.76□□□□□ -0.21
VHL-202ENST00000345392 NCBP2LA6PVI3 153 aaKnown RBP13.76□□□□□ -0.21
VHL-202ENST00000345392 E9PLD3 99 aa13.76□□□□□ -0.21
VHL-202ENST00000345392 FOXI2Q6ZQN5 318 aa13.76□□□□□ -0.21
VHL-202ENST00000345392 ARPC1AQ92747 370 aa13.76□□□□□ -0.21
VHL-202ENST00000345392 ZNF479Q96JC4 524 aa13.76□□□□□ -0.21
VHL-202ENST00000345392 CTSGP08311 255 aa13.75□□□□□ -0.21
VHL-202ENST00000345392 C5orf64Q2M2E5 130 aa13.75□□□□□ -0.21
VHL-202ENST00000345392 ETDBQ3ZM63 59 aa13.75□□□□□ -0.21
VHL-202ENST00000345392 SPANXB1Q9NS25 103 aaPredicted RBP13.75□□□□□ -0.21
VHL-202ENST00000345392 DPM3Q9P2X0 92 aa13.75□□□□□ -0.21
VHL-202ENST00000345392 IGLV2-18A0A075B6J9 118 aa13.75□□□□□ -0.21
VHL-202ENST00000345392 IGHV3-66A0A0C4DH42 116 aa13.75□□□□□ -0.21
VHL-202ENST00000345392 ATP5LO75964 103 aa13.75□□□□□ -0.21
VHL-202ENST00000345392 NDUFA3O95167 84 aa13.75□□□□□ -0.21
VHL-202ENST00000345392 Q8N8P6 123 aa13.75□□□□□ -0.21
VHL-202ENST00000345392 EFNA4P52798 201 aa13.74□□□□□ -0.21
VHL-202ENST00000345392 C11orf21Q9P2W6 132 aa13.74□□□□□ -0.21
VHL-202ENST00000345392 IGKV3D-20A0A0C4DH25 116 aa13.74□□□□□ -0.21
VHL-202ENST00000345392 GAGE12HA6NDE8 117 aa13.74□□□□□ -0.21
VHL-202ENST00000345392 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.74□□□□□ -0.21
VHL-202ENST00000345392 CD3EP07766 207 aa13.74□□□□□ -0.21
VHL-202ENST00000345392 C12orf74Q32Q52 190 aa13.74□□□□□ -0.21
VHL-202ENST00000345392 AKAP6Q13023 2319 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 IGHV3OR16-13A0A075B7E8 117 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 IGHV3-74A0A0B4J1X5 117 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 Q6ZQT7 251 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 LCNL1Q6ZST4 164 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 NPBQ8NG41 125 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 MYOZ3Q8TDC0 251 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 HIST1H4GQ99525 98 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 SMPXQ9UHP9 88 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 UFC1Q9Y3C8 167 aa13.73□□□□□ -0.21
VHL-202ENST00000345392 F8W1H4 67 aa13.72□□□□□ -0.21
VHL-202ENST00000345392 CD300EQ496F6 205 aaPredicted RBP13.72□□□□□ -0.21
VHL-202ENST00000345392 PSMG4Q5JS54 123 aa13.72□□□□□ -0.21
VHL-202ENST00000345392 LINC01559Q495D7 138 aa13.72□□□□□ -0.21
VHL-202ENST00000345392 COL6A6A6NMZ7 2263 aa13.72□□□□□ -0.21
VHL-202ENST00000345392 SPAG8Q99932 426 aaPredicted RBP13.71□□□□□ -0.21
VHL-202ENST00000345392 B9A039 149 aa13.71□□□□□ -0.22
VHL-202ENST00000345392 INSL3P51460 131 aa13.71□□□□□ -0.22
VHL-202ENST00000345392 LAGE3Q14657 143 aa13.71□□□□□ -0.22
VHL-202ENST00000345392 ZNF48Q96MX3 618 aaPredicted RBP13.71□□□□□ -0.22
VHL-202ENST00000345392 SRSF2Q01130 221 aaKnown RBP13.7□□□□□ -0.22
VHL-202ENST00000345392 TTC9CQ8N5M4 171 aa13.7□□□□□ -0.22
VHL-202ENST00000345392 SPTBN1Q01082 2364 aaKnown RBP13.7□□□□□ -0.22
VHL-202ENST00000345392 PKD1L2Q7Z442 2459 aa13.7□□□□□ -0.22
VHL-202ENST00000345392 SRSF1Q07955 248 aaKnown RBP eCLIP13.7□□□□□ -0.222e-8■■□□□ 13.7
VHL-202ENST00000345392 CDSNQ15517 529 aa13.7□□□□□ -0.22
VHL-202ENST00000345392 ZNF672Q499Z4 452 aaPredicted RBP13.7□□□□□ -0.22
VHL-202ENST00000345392 NRACQ8N912 160 aa13.7□□□□□ -0.22
VHL-202ENST00000345392 KLK15Q9H2R5 256 aa13.7□□□□□ -0.22
VHL-202ENST00000345392 A0A087WX48 190 aa13.69□□□□□ -0.22
VHL-202ENST00000345392 CELSR1Q9NYQ6 3014 aa13.69□□□□□ -0.22
VHL-202ENST00000345392 IGHV3-49A0A0A0MS15 119 aa13.68□□□□□ -0.22
VHL-202ENST00000345392 AGPAT4-IT1Q9H0P7 198 aa13.68□□□□□ -0.22
VHL-202ENST00000345392 SPRY2O43597 315 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 GAGE13Q4V321 117 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 VPS13CQ709C8 3753 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 ATP5G2Q06055 141 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 CCDC144NLQ6NUI1 221 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 OR11H6Q8NGC7 330 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 ITPR1Q14643 2758 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 IGHV7-4-1A0A0J9YVY3 117 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 J3QR89 54 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 CYSLTR1Q9Y271 337 aa13.67□□□□□ -0.22
VHL-202ENST00000345392 HLA-DRB4P13762 266 aa13.66□□□□□ -0.22
VHL-202ENST00000345392 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
VHL-202ENST00000345392 LY6G5BQ8NDX9 201 aa13.66□□□□□ -0.22
VHL-202ENST00000345392 HLA-DRB4X5D2U9 266 aa13.66□□□□□ -0.22
VHL-202ENST00000345392 K7ENP7 123 aa13.66□□□□□ -0.22
VHL-202ENST00000345392 RRN3P1Q2M238 152 aa13.66□□□□□ -0.22
VHL-202ENST00000345392 SPANXN1Q5VSR9 72 aa13.66□□□□□ -0.22
VHL-202ENST00000345392 TRBV7-3A0A075B6L6 115 aa13.65□□□□□ -0.22
VHL-202ENST00000345392 BUB3O43684 328 aa13.65□□□□□ -0.22
VHL-202ENST00000345392 CLEC3BP05452 202 aa13.65□□□□□ -0.22
VHL-202ENST00000345392 COL12A1Q99715 3063 aa13.65□□□□□ -0.22
VHL-202ENST00000345392 TAL2Q16559 108 aa13.65□□□□□ -0.22
VHL-202ENST00000345392 C15orf32Q32M92 178 aa13.65□□□□□ -0.22
VHL-202ENST00000345392 PRO0461Q9UI25 63 aa13.65□□□□□ -0.22
VHL-202ENST00000345392 PLNP26678 52 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms