RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 Q6YL49 198 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 GTF2H5Q6ZYL4 71 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 OR1N2Q8NGR9 330 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 GTSF1Q8WW33 167 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 FOXC2Q99958 501 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 CLEC5AQ9NY25 188 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 PDZD2O15018 2839 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 H3BRN7 92 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 CLEC3BP05452 202 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 MPV17L2Q567V2 206 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 OR10AG1Q8NH19 301 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 LINC00527Q9UJ94 153 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 ZNF580Q9UK33 172 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 G3V4G9 280 aa9.92□□□□□ -0.82
CLK3-201ENST00000345005 GPR183P32249 361 aa9.92□□□□□ -0.82
CLK3-201ENST00000345005 Q86TA4 180 aa9.92□□□□□ -0.82
CLK3-201ENST00000345005 BPIFA4PQ86YQ2 179 aa9.92□□□□□ -0.82
CLK3-201ENST00000345005 TMEM75Q8N9X5 138 aa9.92□□□□□ -0.82
CLK3-201ENST00000345005 AP5S1Q9NUS5 200 aa9.92□□□□□ -0.82
CLK3-201ENST00000345005 OTOGQ6ZRI0 2925 aa9.92□□□□□ -0.82
CLK3-201ENST00000345005 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 M0QZ24 198 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 TRGV3P03979 118 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 COX8AP10176 69 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 PPIFP30405 207 aaKnown RBP9.91□□□□□ -0.82
CLK3-201ENST00000345005 SMPXQ9UHP9 88 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 VPREB3Q9UKI3 123 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 FBLL1A6NHQ2 334 aaKnown RBP9.91□□□□□ -0.82
CLK3-201ENST00000345005 CLEC19AQ6UXS0 136 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 FA2HQ7L5A8 372 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 CIARTQ8N365 385 aaPredicted RBP9.91□□□□□ -0.82
CLK3-201ENST00000345005 USMG5Q96IX5 58 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 CCDC140Q96MF4 163 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 RABAC1Q9UI14 185 aa9.91□□□□□ -0.82
CLK3-201ENST00000345005 SMAD7O15105 426 aaKnown RBP9.9□□□□□ -0.82
CLK3-201ENST00000345005 SIVA1O15304 175 aa9.9□□□□□ -0.82
CLK3-201ENST00000345005 APOHP02749 345 aaPredicted RBP9.9□□□□□ -0.82
CLK3-201ENST00000345005 Q6ZS46 218 aa9.9□□□□□ -0.82
CLK3-201ENST00000345005 MYO9AB2RTY4 2548 aa9.9□□□□□ -0.82
CLK3-201ENST00000345005 CCDC168Q8NDH2 2452 aa9.9□□□□□ -0.83
CLK3-201ENST00000345005 A6NDN8 102 aa9.89□□□□□ -0.83
CLK3-201ENST00000345005 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
CLK3-201ENST00000345005 PRSS3P2Q8NHM4 247 aa9.89□□□□□ -0.83
CLK3-201ENST00000345005 hDV102S1A0JD36 115 aa9.89□□□□□ -0.83
CLK3-201ENST00000345005 IGLV1-40P01703 118 aa9.89□□□□□ -0.83
CLK3-201ENST00000345005 LINC00322Q6ZN03 302 aaPredicted RBP9.89□□□□□ -0.83
CLK3-201ENST00000345005 NPFFR1Q9GZQ6 430 aa9.89□□□□□ -0.83
CLK3-201ENST00000345005 A0A0G2JLM5 398 aa9.88□□□□□ -0.83
CLK3-201ENST00000345005 PF4V1P10720 104 aa9.88□□□□□ -0.83
CLK3-201ENST00000345005 RAB9AP51151 201 aa9.88□□□□□ -0.83
CLK3-201ENST00000345005 LINC01559Q495D7 138 aa9.88□□□□□ -0.83
CLK3-201ENST00000345005 FER1L6-AS1Q8NA97 138 aa9.88□□□□□ -0.83
CLK3-201ENST00000345005 OR9G4Q8NGQ1 327 aa9.88□□□□□ -0.83
CLK3-201ENST00000345005 AP1S3Q96PC3 154 aa9.88□□□□□ -0.83
CLK3-201ENST00000345005 ZNF747Q9BV97 191 aa9.88□□□□□ -0.83
CLK3-201ENST00000345005 FLNAP21333 2647 aaKnown RBP9.87□□□□□ -0.83
CLK3-201ENST00000345005 MXRA5Q9NR99 2828 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 MUC21A0A0G2JKD1 596 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 MUC21A0A140T8X8 626 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 HOXA3O43365 443 aaPredicted RBP9.87□□□□□ -0.83
CLK3-201ENST00000345005 CT45A10P0DMU9 189 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 RPL7P18124 248 aaKnown RBP9.87□□□□□ -0.83
CLK3-201ENST00000345005 CFHR3Q02985 330 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 PDE6HQ13956 83 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 MUC21Q5SSG8 566 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 AMMECR1LQ6DCA0 310 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 UFSP1Q6NVU6 142 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 PRNTQ86SH4 94 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 ZFHX3Q15911 3703 aa9.87□□□□□ -0.83
CLK3-201ENST00000345005 TRBV19A0A075B6N1 114 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 IGHV3-35A0A0C4DH35 117 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 A0A1B0GV72 72 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 TMEM89A2RUT3 159 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 MRPS12O15235 138 aaKnown RBP9.86□□□□□ -0.83
CLK3-201ENST00000345005 IGLV2-11P01706 119 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 PSG9Q00887 426 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 LGALS9BQ3B8N2 356 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 TMEM97Q5BJF2 176 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 LGALS9CQ6DKI2 356 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 GOLT1AQ6ZVE7 132 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 OR5A1Q8NGJ0 315 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 ZNF414Q96IQ9 312 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 ZFAND3Q9H8U3 227 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 GAGE10A6NGK3 116 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 A6NJY4 79 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 H3BRM9 83 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 H3BTX0 84 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 IGHG4P01861 327 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 NEGR1Q7Z3B1 354 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 MTURNQ8N3F0 131 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 OR4X2Q8NGF9 303 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 U3KQK5 164 aa9.86□□□□□ -0.83
CLK3-201ENST00000345005 ARL3P36405 182 aa9.85□□□□□ -0.83
CLK3-201ENST00000345005 LINC00173Q6ZV60 143 aa9.85□□□□□ -0.83
CLK3-201ENST00000345005 SGK494Q96LW2 274 aa9.85□□□□□ -0.83
CLK3-201ENST00000345005 KLK15Q9H2R5 256 aa9.85□□□□□ -0.83
CLK3-201ENST00000345005 PSG8Q9UQ74 426 aa9.85□□□□□ -0.83
CLK3-201ENST00000345005 TLN2Q9Y4G6 2542 aa9.85□□□□□ -0.83
CLK3-201ENST00000345005 TMEM86BQ8N661 226 aa9.84□□□□□ -0.83
CLK3-201ENST00000345005 METTL26Q96S19 204 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms