RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ZNF138P52744 262 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 ANXA2RQ3ZCQ2 193 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 Q8TAT8 98 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 Q9H3A6 140 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 Q9H8V8 135 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 ZNF492Q9P255 531 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 MBD2Q9UBB5 411 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 TP53TG3Q9ULZ0 132 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 RPH3ALQ9UNE2 315 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 HSPG2P98160 4391 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 IGHV1OR15-1A0A075B7D0 117 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 NMBP08949 121 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 GIPP09681 153 aaPredicted RBP8.62□□□□□ -1.03
SGCA-202ENST00000344627 TNP2Q05952 138 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 ESRGQ1W209 222 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 KHDC3LQ587J8 217 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 PRR9Q5T870 116 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 Q6ZQT7 251 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 ZFAND2AQ8N6M9 145 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 C11orf72Q8NBR9 251 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 LINC00467Q9BRT7 94 aa8.62□□□□□ -1.03
SGCA-202ENST00000344627 A0A1W2PPV4 95 aa8.61□□□□□ -1.03
SGCA-202ENST00000344627 TCL1AP56279 114 aa8.61□□□□□ -1.03
SGCA-202ENST00000344627 ACOT6Q3I5F7 207 aaPredicted RBP8.61□□□□□ -1.03
SGCA-202ENST00000344627 MUC21Q5SSG8 566 aa8.61□□□□□ -1.03
SGCA-202ENST00000344627 LYPD1Q8N2G4 141 aa8.61□□□□□ -1.03
SGCA-202ENST00000344627 CMTM2Q8TAZ6 248 aa8.61□□□□□ -1.03
SGCA-202ENST00000344627 C18orf15Q96N68 181 aa8.61□□□□□ -1.03
SGCA-202ENST00000344627 MRPL16Q9NX20 251 aaKnown RBP8.61□□□□□ -1.03
SGCA-202ENST00000344627 PGPA6NDG6 321 aa8.6□□□□□ -1.03
SGCA-202ENST00000344627 PAX4O43316 350 aa8.6□□□□□ -1.03
SGCA-202ENST00000344627 ZNF415Q09FC8 603 aa8.6□□□□□ -1.03
SGCA-202ENST00000344627 IBA57Q5T440 356 aaKnown RBP8.6□□□□□ -1.03
SGCA-202ENST00000344627 WFDC1Q9HC57 220 aa8.6□□□□□ -1.03
SGCA-202ENST00000344627 NAGKQ9UJ70 344 aa8.6□□□□□ -1.03
SGCA-202ENST00000344627 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
SGCA-202ENST00000344627 RBAKDNA6NC62 111 aa8.59□□□□□ -1.03
SGCA-202ENST00000344627 DIRC3C9JPN6 131 aa8.59□□□□□ -1.03
SGCA-202ENST00000344627 HMGB3O15347 200 aaKnown RBP8.59□□□□□ -1.03
SGCA-202ENST00000344627 SPINK4O60575 86 aa8.59□□□□□ -1.03
SGCA-202ENST00000344627 FAM74A1Q5RGS3 127 aa8.59□□□□□ -1.03
SGCA-202ENST00000344627 AKAP14Q86UN6 197 aa8.59□□□□□ -1.03
SGCA-202ENST00000344627 MAPKAPK5-AS1Q8N8E1 139 aa8.59□□□□□ -1.03
SGCA-202ENST00000344627 VSIG2Q96IQ7 327 aa8.59□□□□□ -1.03
SGCA-202ENST00000344627 OTORQ9NRC9 128 aa8.59□□□□□ -1.03
SGCA-202ENST00000344627 MRPS16Q9Y3D3 137 aaKnown RBP8.59□□□□□ -1.03
SGCA-202ENST00000344627 hCG_2014768A0A024R1R8 64 aa8.58□□□□□ -1.04
SGCA-202ENST00000344627 A0A096LPF7 62 aa8.58□□□□□ -1.04
SGCA-202ENST00000344627 ZNF266Q14584 549 aa8.58□□□□□ -1.04
SGCA-202ENST00000344627 FAM159AQ6UWV7 190 aa8.58□□□□□ -1.04
SGCA-202ENST00000344627 Q8N1X5 172 aa8.58□□□□□ -1.04
SGCA-202ENST00000344627 ST6GAL2Q96JF0 529 aa8.58□□□□□ -1.04
SGCA-202ENST00000344627 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
SGCA-202ENST00000344627 TRGV4A0A0C4DH28 118 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 TRBV7-9A0A0J9YWB2 115 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 K7EP13 123 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 RAB2AP61019 212 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 SLAQ13239 276 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 TMEM183BQ1AE95 376 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 PQLC2Q6ZP29 291 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 GOLT1AQ6ZVE7 132 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 TMEM183AQ8IXX5 376 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 OR10G4Q8NGN3 311 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 OR10G9Q8NGN4 311 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 OR10G7Q8NGN6 311 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 C8orf49Q96NF6 230 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 MDFICQ9P1T7 246 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 PRO0255Q9UI72 69 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 HHLA3Q9XRX5 114 aa8.57□□□□□ -1.04
SGCA-202ENST00000344627 EREGO14944 169 aa8.56□□□□□ -1.04
SGCA-202ENST00000344627 SPATA12Q7Z6I5 190 aa8.56□□□□□ -1.04
SGCA-202ENST00000344627 TCTE3Q8IZS6 198 aa8.56□□□□□ -1.04
SGCA-202ENST00000344627 OR2T35Q8NGX2 323 aa8.56□□□□□ -1.04
SGCA-202ENST00000344627 PGPEP1Q9NXJ5 209 aa8.56□□□□□ -1.04
SGCA-202ENST00000344627 LENEPQ9Y5L5 61 aa8.56□□□□□ -1.04
SGCA-202ENST00000344627 TRGV11A0A075B6L2 103 aa8.55□□□□□ -1.04
SGCA-202ENST00000344627 GNG5P63218 68 aa8.55□□□□□ -1.04
SGCA-202ENST00000344627 HSD17B11Q8NBQ5 300 aa8.55□□□□□ -1.04
SGCA-202ENST00000344627 TREM1Q9NP99 234 aa8.55□□□□□ -1.04
SGCA-202ENST00000344627 F6UZH7 168 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 SIVA1O15304 175 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 PFDN1O60925 122 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 NXPH4O95158 308 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 SFTA3P0C7M3 94 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 ARL14EPLP0DKL9 152 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 CDC34P49427 236 aaPredicted RBP8.54□□□□□ -1.04
SGCA-202ENST00000344627 CRYBA4P53673 196 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 FHL2Q14192 279 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 MRPL23Q16540 153 aaKnown RBP8.54□□□□□ -1.04
SGCA-202ENST00000344627 Q6AWC8 147 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 CDPF1Q6NVV7 123 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 IQCF2Q8IXL9 164 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 INO80EQ8NBZ0 244 aaPredicted RBP8.54□□□□□ -1.04
SGCA-202ENST00000344627 PCNPQ8WW12 178 aaKnown RBP8.54□□□□□ -1.04
SGCA-202ENST00000344627 SPXQ9BT56 116 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 KRTAP1-5Q9BYS1 174 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
SGCA-202ENST00000344627 TRAV9-2A0A087WT02 112 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms