RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 DLL3Q9NYJ7 618 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 MIFP14174 115 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 LINC00477Q96M19 166 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 KIDINS220Q9ULH0 1771 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 LRRK2Q5S007 2527 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 C19orf84I3L1E1 186 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 GATA3P23771 443 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 COX8CQ7Z4L0 72 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 CHCHD5Q9BSY4 110 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 MTORP42345 2549 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 SH2D1AO60880 128 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 U3KQK5 164 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 ZNF876PQ49A33 203 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 GPHA2Q96T91 129 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 PLAC8L1A1L4L8 177 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 MPLKIPQ8TAP9 179 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 NCOR2Q9Y618 2525 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 A0A1W2PP55 124 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 XGP55808 180 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 UBE2D4Q9Y2X8 147 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 NWD2Q9ULI1 1742 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 IL9P15248 144 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 COX7A2LO14548 114 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 Q6JHZ5 121 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 MBD3L2Q8NHZ7 208 aaPredicted RBP3□□□□□ -1.93
SYNE2-202ENST00000344113 CFHR3Q02985 330 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 LINC00336Q6ZUF6 198 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 SHANK2-AS3Q9BTD1 123 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 IGLV1-36A0A0B4J1U3 117 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 RBAKDNA6NC62 111 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 C20orf197Q8N268 126 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 HCSTQ9UBK5 93 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 LTAP01374 205 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 ZNF32P17041 273 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 TLN2Q9Y4G6 2542 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 RPL36AP83881 106 aaKnown RBP3□□□□□ -1.93
SYNE2-202ENST00000344113 PTCRAQ6ISU1 281 aaPredicted RBP3□□□□□ -1.93
SYNE2-202ENST00000344113 SCXQ7RTU7 201 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 TMEM254Q8TBM7 123 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 RPL36ALQ969Q0 106 aaKnown RBP3□□□□□ -1.93
SYNE2-202ENST00000344113 SPINK9Q5DT21 86 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 RNF7Q9UBF6 113 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 LINC00694P0DN24 101 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 PLXND1Q9Y4D7 1925 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 TMEM89A2RUT3 159 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 Q6ZNB5 142 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 PRO0461Q9UI25 63 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 TRBV7-1A0A0A6YYK4 115 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 FOXE3Q13461 319 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 CXCL17Q6UXB2 119 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 PLA2G2EQ9NZK7 142 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 HIST2H2BCQ6DN03 193 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 HIST2H2BDQ6DRA6 164 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 ARHGAP21Q5T5U3 1957 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 NREPQ16612 68 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 CLEC19AQ6UXS0 136 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 Q6ZRU5 148 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 CCL3L1P16619 93 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 HRCT1Q6UXD1 115 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 HIGD2BQ4VC39 106 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 TREML4Q6UXN2 200 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 DYNAPQ8N1N2 210 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 IGHV1-69P01742 117 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 C1orf147Q96MC9 270 aaPredicted RBP2.99□□□□□ -1.93
SYNE2-202ENST00000344113 VN1R4Q7Z5H5 301 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 C2orf66Q6UXQ4 117 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 TLN1Q9Y490 2541 aaKnown RBP2.99□□□□□ -1.93
SYNE2-202ENST00000344113 WNT10BO00744 389 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 ESRGQ1W209 222 aa2.99□□□□□ -1.93
SYNE2-202ENST00000344113 DOT1LQ8TEK3 1739 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 ZNF138P52744 262 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 ASB16-AS1Q495Z4 193 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 Q86TA4 180 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 TRBV7-3A0A075B6L6 115 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 GFRALQ6UXV0 394 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 ZNF497Q6ZNH5 498 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 K7EN84 100 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 TFF3Q07654 80 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 LYZL1Q6UWQ5 148 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 BPY2O14599 106 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 IGLV3-1P01715 115 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 SCRG1O75711 98 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 LPAL2Q16609 132 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 KMT2EQ8IZD2 1858 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 TMEM14BQ9NUH8 114 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 INSP01308 110 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 DAZ4Q86SG3 579 aaKnown RBP2.98□□□□□ -1.93
SYNE2-202ENST00000344113 PLPPR2Q96GM1 343 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 DAZ3Q9NR90 486 aaKnown RBP2.98□□□□□ -1.93
SYNE2-202ENST00000344113 SS18Q15532 418 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 TMEM61Q8N0U2 210 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 MRPL35Q9NZE8 188 aaKnown RBP2.98□□□□□ -1.93
SYNE2-202ENST00000344113 C11orf86A6NJI1 115 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 TMEM167AQ8TBQ9 72 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 USMG5Q96IX5 58 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 TP53TG3Q9ULZ0 132 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 SPRNQ5BIV9 151 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 PCP2Q8IVA1 136 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 OOSP1A8MZH6 123 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 STPG1Q5TH74 334 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms