RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 K7ERJ3 54 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 GCHFRP30047 84 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 MFAP2P55001 183 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 FAM159AQ6UWV7 190 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 PQLC2Q6ZP29 291 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 NUP35Q8NFH5 326 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 RASL10AQ92737 203 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 IGF2BP2-AS1Q96M15 143 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 SOX21Q9Y651 276 aaPredicted RBP5.67□□□□□ -1.5
ZNF540-202ENST00000343599 DNAH7Q8WXX0 4024 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 TRAV5A0A0B4J249 113 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 WNT9BO14905 357 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 IGHG2P01859 326 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 PPIFP30405 207 aaKnown RBP5.67□□□□□ -1.5
ZNF540-202ENST00000343599 GAGE2BQ13066 116 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 ANXA2RQ3ZCQ2 193 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 GAGE2EQ4V326 116 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 MEIG1Q5JSS6 88 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 IL17RELQ6ZVW7 336 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 CARD19Q96LW7 228 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 GAGE2DQ9UEU5 116 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 WDR83OSQ9Y284 106 aa5.67□□□□□ -1.5
ZNF540-202ENST00000343599 SPTBN1Q01082 2364 aaKnown RBP5.66□□□□□ -1.5
ZNF540-202ENST00000343599 TCRBV4S1A1TA0A5B7 111 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 PRSS46E5RG02 174 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 J3QT63 122 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 DHRS3O75911 302 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 NCR2O95944 276 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 CSN3P07498 182 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 IGHV4-38-2P0DP08 117 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 MYOD1P15172 320 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 RSPO1Q2MKA7 263 aaPredicted RBP5.66□□□□□ -1.5
ZNF540-202ENST00000343599 LGALS9BQ3B8N2 356 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 LGALS9CQ6DKI2 356 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 LINC01587Q99440 93 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 MPDU1O75352 247 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 GCSHP23434 173 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 PSMG4Q5JS54 123 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 FGFBP3Q8TAT2 258 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 CTSZQ9UBR2 303 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 DSCAML1Q8TD84 2053 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 ABCA4P78363 2273 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 FBN1P35555 2871 aaKnown RBP5.66□□□□□ -1.5
ZNF540-202ENST00000343599 USF3Q68DE3 2245 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 BOD1L1Q8NFC6 3051 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 SPTAN1Q13813 2472 aaKnown RBP5.66□□□□□ -1.5
ZNF540-202ENST00000343599 TRBV20-1A0A075B6N2 111 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 ZNF688P0C7X2 276 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 CGB3P0DN86 165 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 CGB7P0DN87 165 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 BCL3P20749 454 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 TTC32Q5I0X7 151 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 Q6P435 159 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 CEND1Q8N111 149 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 MRAPQ8TCY5 172 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 KIR2DL4Q99706 377 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 MOB4Q9Y3A3 225 aa5.66□□□□□ -1.5
ZNF540-202ENST00000343599 C5orf49A4QMS7 147 aa5.65□□□□□ -1.5
ZNF540-202ENST00000343599 H3BS24 57 aa5.65□□□□□ -1.5
ZNF540-202ENST00000343599 K7EIL1 84 aa5.65□□□□□ -1.5
ZNF540-202ENST00000343599 MGST3O14880 152 aa5.65□□□□□ -1.5
ZNF540-202ENST00000343599 RRN3P1Q2M238 152 aa5.65□□□□□ -1.5
ZNF540-202ENST00000343599 PIGYQ3MUY2 71 aa5.65□□□□□ -1.5
ZNF540-202ENST00000343599 AMTNQ6UX39 209 aa5.65□□□□□ -1.5
ZNF540-202ENST00000343599 A0A0A0MQY5 61 aa5.65□□□□□ -1.51
ZNF540-202ENST00000343599 A0A1B0GX51 115 aa5.65□□□□□ -1.51
ZNF540-202ENST00000343599 A8MWL6 223 aa5.65□□□□□ -1.51
ZNF540-202ENST00000343599 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.65□□□□□ -1.51
ZNF540-202ENST00000343599 PLXNB1O43157 2135 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 ZNF469Q96JG9 3925 aaPredicted RBP5.64□□□□□ -1.51
ZNF540-202ENST00000343599 TRAV40A0A0B4J280 105 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 NPIPB6E9PJ23 425 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 IGLV1-47P01700 117 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 ASIPP42127 132 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 PRR20EP86478 221 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 PRR20CP86479 221 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 PRR20DP86480 221 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 PRR20BP86481 221 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 PRR20AP86496 221 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 SPRNQ5BIV9 151 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 TEN1Q86WV5 123 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 PCP2Q8IVA1 136 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 LINC00479Q96M42 142 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 DUX5Q96PT3 197 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 NHP2Q9NX24 153 aaKnown RBP5.64□□□□□ -1.51
ZNF540-202ENST00000343599 PKDREJQ9NTG1 2253 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 TRAV2A0A0B4J234 112 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 IGKV1-6A0A0C4DH72 117 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 A0A1W2PPI3 338 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 SCTP09683 121 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 P0C879 139 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 FAM106CPP0CH98 169 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 RPL7P18124 248 aaKnown RBP5.64□□□□□ -1.51
ZNF540-202ENST00000343599 KIR2DS2P43631 304 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 EDDM3BP56851 147 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 HBBP68871 147 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 TAL2Q16559 108 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 FAM106AQ4KMX7 169 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 LINC00336Q6ZUF6 198 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms