RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 C16orf92Q96LL3 132 aa14.2□□□□□ -0.14
HOXA9-201ENST00000343483 TMSB15BA0A087X1C1 80 aa14.19□□□□□ -0.14
HOXA9-201ENST00000343483 A0A1B0GW15 77 aa14.19□□□□□ -0.14
HOXA9-201ENST00000343483 ZNF705AQ6ZN79 300 aaPredicted RBP14.19□□□□□ -0.14
HOXA9-201ENST00000343483 COX8CQ7Z4L0 72 aa14.19□□□□□ -0.14
HOXA9-201ENST00000343483 C2orf88Q9BSF0 95 aa14.19□□□□□ -0.14
HOXA9-201ENST00000343483 ZNF702PQ9H963 129 aa14.19□□□□□ -0.14
HOXA9-201ENST00000343483 A0A1B0GV90 55 aa14.19□□□□□ -0.14
HOXA9-201ENST00000343483 CHCHD1Q96BP2 118 aaKnown RBP14.19□□□□□ -0.14
HOXA9-201ENST00000343483 MIEN1Q9BRT3 115 aa14.19□□□□□ -0.14
HOXA9-201ENST00000343483 EREGO14944 169 aa14.18□□□□□ -0.14
HOXA9-201ENST00000343483 RPLP1P05386 114 aaKnown RBP14.18□□□□□ -0.14
HOXA9-201ENST00000343483 TM4SF20Q53R12 229 aa14.18□□□□□ -0.14
HOXA9-201ENST00000343483 RBAKDNA6NC62 111 aa14.18□□□□□ -0.14
HOXA9-201ENST00000343483 RPL11P62913 178 aaKnown RBP14.18□□□□□ -0.14
HOXA9-201ENST00000343483 EBLN2Q6P2I7 272 aa14.18□□□□□ -0.14
HOXA9-201ENST00000343483 GATD1Q8NB37 220 aa14.18□□□□□ -0.14
HOXA9-201ENST00000343483 DAZ1Q9NQZ3 744 aaKnown RBP14.18□□□□□ -0.14
HOXA9-201ENST00000343483 TMEM89A2RUT3 159 aa14.17□□□□□ -0.14
HOXA9-201ENST00000343483 PMCHL1Q16048 86 aa14.17□□□□□ -0.14
HOXA9-201ENST00000343483 TLN2Q9Y4G6 2542 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 BTF3P20290 206 aaKnown RBP14.16□□□□□ -0.14
HOXA9-201ENST00000343483 ZNF80P51504 273 aaPredicted RBP14.16□□□□□ -0.14
HOXA9-201ENST00000343483 SPATA45Q537H7 98 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 LYZL1Q6UWQ5 148 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 MRPL53Q96EL3 112 aaKnown RBP14.16□□□□□ -0.14
HOXA9-201ENST00000343483 RHPN1-AS1Q9BWJ2 59 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 IGHV7-4-1A0A0J9YVY3 117 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 LINC00614P0C842 121 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 FAM106AQ4KMX7 169 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 SMR3AQ99954 134 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 SNHG12Q9BXW3 62 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 SELENOKQ9Y6D0 94 aa14.16□□□□□ -0.14
HOXA9-201ENST00000343483 M0R143 59 aa14.15□□□□□ -0.14
HOXA9-201ENST00000343483 BMI1P35226 326 aa14.15□□□□□ -0.14
HOXA9-201ENST00000343483 AGPAT4-IT1Q9H0P7 198 aa14.15□□□□□ -0.14
HOXA9-201ENST00000343483 CLEC5AQ9NY25 188 aa14.15□□□□□ -0.14
HOXA9-201ENST00000343483 IGKV3-7A0A075B6H7 116 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 IGHV1-24A0A0C4DH33 117 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 C2orf70A6NJV1 201 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 CTRLP40313 264 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 TMEM78Q5T7P6 136 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 GPHB5Q86YW7 130 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 MTORP42345 2549 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 SSTP61278 116 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 FOXE3Q13461 319 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 ZNF738Q8NE65 137 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 C20orf173Q96LM9 149 aa14.14□□□□□ -0.15
HOXA9-201ENST00000343483 RAB4AP20338 218 aa14.13□□□□□ -0.15
HOXA9-201ENST00000343483 EDN2P20800 178 aa14.13□□□□□ -0.15
HOXA9-201ENST00000343483 ZNF138P52744 262 aa14.13□□□□□ -0.15
HOXA9-201ENST00000343483 RPS20P60866 119 aaKnown RBP14.13□□□□□ -0.15
HOXA9-201ENST00000343483 ZNF493Q6ZR52 646 aa14.13□□□□□ -0.15
HOXA9-201ENST00000343483 ATOH7Q8N100 152 aa14.13□□□□□ -0.15
HOXA9-201ENST00000343483 CSN3P07498 182 aa14.13□□□□□ -0.15
HOXA9-201ENST00000343483 ELANEP08246 267 aa14.13□□□□□ -0.15
HOXA9-201ENST00000343483 SMPXQ9UHP9 88 aa14.13□□□□□ -0.15
HOXA9-201ENST00000343483 TMEM213A2RRL7 107 aa14.12□□□□□ -0.15
HOXA9-201ENST00000343483 TEX29Q8N6K0 151 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 TMEM70Q9BUB7 260 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 MUC21A0A0G2JKD1 596 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 MUC21A0A140T8X8 626 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 FABP5P3A8MUU1 101 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 K7EMT4 169 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 SOCS3O14543 225 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 LEPROTL1O95214 131 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 ORM1P02763 201 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 MUC21Q5SSG8 566 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 FER1L6-AS1Q8NA97 138 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 UFC1Q9Y3C8 167 aa14.11□□□□□ -0.15
HOXA9-201ENST00000343483 LGALS1P09382 135 aaKnown RBP14.1□□□□□ -0.15
HOXA9-201ENST00000343483 SRD5A1P18405 259 aa14.1□□□□□ -0.15
HOXA9-201ENST00000343483 DMRTA1Q5VZB9 504 aa14.1□□□□□ -0.15
HOXA9-201ENST00000343483 C9orf47Q6ZRZ4 202 aa14.1□□□□□ -0.15
HOXA9-201ENST00000343483 SRSF2Q01130 221 aaKnown RBP14.1□□□□□ -0.15
HOXA9-201ENST00000343483 SPATA12Q7Z6I5 190 aa14.1□□□□□ -0.15
HOXA9-201ENST00000343483 MAJINQ3KP22 176 aa14.09□□□□□ -0.15
HOXA9-201ENST00000343483 FAM104BQ5XKR9 115 aa14.09□□□□□ -0.15
HOXA9-201ENST00000343483 LINC00173Q6ZV60 143 aa14.09□□□□□ -0.15
HOXA9-201ENST00000343483 MRPL52Q86TS9 123 aaKnown RBP14.09□□□□□ -0.15
HOXA9-201ENST00000343483 MYOZ3Q8TDC0 251 aa14.09□□□□□ -0.15
HOXA9-201ENST00000343483 OR5AL1P0C617 328 aa14.08□□□□□ -0.15
HOXA9-201ENST00000343483 IGLC6P0CF74 106 aa14.08□□□□□ -0.15
HOXA9-201ENST00000343483 AMN1Q8IY45 258 aa14.08□□□□□ -0.15
HOXA9-201ENST00000343483 Q8N2B8 174 aa14.08□□□□□ -0.15
HOXA9-201ENST00000343483 KLHDC1Q8N7A1 406 aa14.08□□□□□ -0.15
HOXA9-201ENST00000343483 UBE2E2Q96LR5 201 aa14.08□□□□□ -0.15
HOXA9-201ENST00000343483 UQCR10Q9UDW1 63 aa14.08□□□□□ -0.15
HOXA9-201ENST00000343483 D6R8Y8 96 aa14.08□□□□□ -0.16
HOXA9-201ENST00000343483 IGLC3P0DOY3 106 aa14.08□□□□□ -0.16
HOXA9-201ENST00000343483 DEFB1P60022 68 aa14.08□□□□□ -0.16
HOXA9-201ENST00000343483 TWIST1Q15672 202 aa14.08□□□□□ -0.16
HOXA9-201ENST00000343483 OR10J6PQ8NGY7 276 aa14.08□□□□□ -0.16
HOXA9-201ENST00000343483 IGHV4OR15-8A0A075B7B6 117 aa14.07□□□□□ -0.16
HOXA9-201ENST00000343483 TRAV9-2A0A087WT02 112 aa14.07□□□□□ -0.16
HOXA9-201ENST00000343483 A0A087WW49 117 aa14.07□□□□□ -0.16
HOXA9-201ENST00000343483 SYS1-DBNDD2H3BUS1 97 aa14.07□□□□□ -0.16
HOXA9-201ENST00000343483 SYNJ2BPP57105 145 aa14.07□□□□□ -0.16
HOXA9-201ENST00000343483 PRSS3P2Q8NHM4 247 aa14.07□□□□□ -0.16
HOXA9-201ENST00000343483 AP5S1Q9NUS5 200 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms