RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 MDS2Q8NDY4 140 aa9.71□□□□□ -0.86
SEMA6A-202ENST00000343348 IGFBPL1Q8WX77 278 aa9.71□□□□□ -0.86
SEMA6A-202ENST00000343348 C17orf77Q96MU5 243 aa9.71□□□□□ -0.86
SEMA6A-202ENST00000343348 TSC2P49815 1807 aa9.71□□□□□ -0.86
SEMA6A-202ENST00000343348 TRIOBPQ9H2D6 2365 aa9.71□□□□□ -0.86
SEMA6A-202ENST00000343348 ROS1P08922 2347 aa9.71□□□□□ -0.86
SEMA6A-202ENST00000343348 ANGP03950 147 aaKnown RBP9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 LINC01619G3V211 115 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 DIAPH2-AS1Q14236 149 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 C3orf56Q8N813 242 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 RLFQ13129 1914 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 NDUFS7O75251 213 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 WISP1O95388 367 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 NTN5Q8WTR8 489 aaPredicted RBP9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 PRR25Q96S07 402 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 SHISA9B4DS77 424 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 B5MCH6 92 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 LGALS9BQ3B8N2 356 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 LGALS9CQ6DKI2 356 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 VWA8A3KMH1 1905 aa9.7□□□□□ -0.86
SEMA6A-202ENST00000343348 UTF1Q5T230 341 aa9.69□□□□□ -0.86
SEMA6A-202ENST00000343348 C12orf74Q32Q52 190 aa9.69□□□□□ -0.86
SEMA6A-202ENST00000343348 XCL1P47992 114 aa9.69□□□□□ -0.86
SEMA6A-202ENST00000343348 WDR81Q562E7 1941 aa9.69□□□□□ -0.86
SEMA6A-202ENST00000343348 IGHV4-28A0A0C4DH34 117 aa9.69□□□□□ -0.86
SEMA6A-202ENST00000343348 GNRH2O43555 120 aa9.69□□□□□ -0.86
SEMA6A-202ENST00000343348 Q6ZS49 121 aa9.69□□□□□ -0.86
SEMA6A-202ENST00000343348 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 IGKV2-29A2NJV5 120 aaPredicted RBP9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 C17orf58Q2M2W7 97 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 J3QQQ9 107 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 NBL1P41271 181 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 FAM110DQ8TAY7 271 aaPredicted RBP9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 EP300Q09472 2414 aaPredicted RBP9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 K7EN84 100 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 FAM120AOSQ5T036 256 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.68□□□□□ -0.862e-6■■■■□ 24.2
SEMA6A-202ENST00000343348 CFHR4Q92496 578 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 COL4A6Q14031 1691 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 TICRRQ7Z2Z1 1910 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 PCP2Q8IVA1 136 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 A0A0J9YY99 117 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 TMEM190Q8WZ59 177 aa9.68□□□□□ -0.86
SEMA6A-202ENST00000343348 F6UB75 175 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 CDKN1BP46527 198 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 SH2D6Q7Z4S9 175 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 NCKAP5O14513 1909 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 F8VRH5 84 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 FHL1Q13642 323 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 Q6ZQT7 251 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 ZNF833PQ6ZTB9 187 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 NOTCH3Q9UM47 2321 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 WDR86Q86TI4 376 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 PKDREJQ9NTG1 2253 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 ABCA4P78363 2273 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 H3BRN7 92 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 USF3Q68DE3 2245 aa9.67□□□□□ -0.86
SEMA6A-202ENST00000343348 TRAV13-2A0A0B4J235 113 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 RHODO00212 210 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 LHBP01229 141 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 IGLV2-23P01705 113 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 IGHV2-5P01817 119 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 CSRP1P21291 193 aaKnown RBP9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 MSMBP08118 114 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 BAALC-AS2P0C853 105 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 FOXE3Q13461 319 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 YPEL3P61236 119 aaPredicted RBP9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 FXYD5Q96DB9 178 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 GATA1P15976 413 aaPredicted RBP9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 WT1-ASQ06250 92 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 CT83Q5H943 113 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 SMIM2Q9BVW6 85 aa9.66□□□□□ -0.86
SEMA6A-202ENST00000343348 RNF114Q9Y508 228 aa9.65□□□□□ -0.86
SEMA6A-202ENST00000343348 WIPF2Q8TF74 440 aaPredicted RBP9.65□□□□□ -0.86
SEMA6A-202ENST00000343348 Q96MF0 132 aa9.65□□□□□ -0.86
SEMA6A-202ENST00000343348 VOPP1Q96AW1 172 aa9.65□□□□□ -0.86
SEMA6A-202ENST00000343348 SHANK1Q9Y566 2161 aa9.65□□□□□ -0.86
SEMA6A-202ENST00000343348 UBE2E1P51965 193 aa9.65□□□□□ -0.86
SEMA6A-202ENST00000343348 Q6ZR03 302 aa9.65□□□□□ -0.86
SEMA6A-202ENST00000343348 ZNF503-AS2A6NEH8 195 aa9.65□□□□□ -0.87
SEMA6A-202ENST00000343348 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.87
SEMA6A-202ENST00000343348 IGKV1OR2-108A0A075B7D4 117 aa9.65□□□□□ -0.87
SEMA6A-202ENST00000343348 ZNF134P52741 427 aa9.65□□□□□ -0.87
SEMA6A-202ENST00000343348 IGHV1-69DA0A0B4J2H0 117 aa9.64□□□□□ -0.87
SEMA6A-202ENST00000343348 IGHV1-69P01742 117 aa9.64□□□□□ -0.87
SEMA6A-202ENST00000343348 GVINP1Q7Z2Y8 2422 aa9.64□□□□□ -0.87
SEMA6A-202ENST00000343348 Q9HAA7 133 aa9.64□□□□□ -0.87
SEMA6A-202ENST00000343348 EGR2P11161 476 aaPredicted RBP9.64□□□□□ -0.87
SEMA6A-202ENST00000343348 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
SEMA6A-202ENST00000343348 IGKV3D-7A0A0C4DH55 119 aa9.63□□□□□ -0.87
SEMA6A-202ENST00000343348 HERVK_113P63121 156 aa9.63□□□□□ -0.87
SEMA6A-202ENST00000343348 Q9H8V8 135 aa9.63□□□□□ -0.87
SEMA6A-202ENST00000343348 CNOT1A5YKK6 2376 aaKnown RBP9.63□□□□□ -0.87
SEMA6A-202ENST00000343348 FNDC1Q4ZHG4 1894 aaPredicted RBP9.63□□□□□ -0.87
SEMA6A-202ENST00000343348 DYNAPQ8N1N2 210 aa9.63□□□□□ -0.87
SEMA6A-202ENST00000343348 ZGRF1Q86YA3 2104 aa9.63□□□□□ -0.87
SEMA6A-202ENST00000343348 IGKV2D-24A0A075B6R9 120 aa9.62□□□□□ -0.87
SEMA6A-202ENST00000343348 FOXL2NBQ6ZUU3 175 aa9.62□□□□□ -0.87
SEMA6A-202ENST00000343348 BOD1L2Q8IYS8 172 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms