RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 OR11H2Q8NH07 326 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 CFHR4Q92496 578 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 VKORC1Q9BQB6 163 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 EMP1P54849 157 aa11.54□□□□□ -0.56
CLCN1-201ENST00000343257 SRSF9Q13242 221 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLCN1-201ENST00000343257 TMEM155Q4W5P6 130 aa11.54□□□□□ -0.56
CLCN1-201ENST00000343257 SCGB1D4Q6XE38 83 aa11.54□□□□□ -0.56
CLCN1-201ENST00000343257 IL17RELQ6ZVW7 336 aa11.54□□□□□ -0.56
CLCN1-201ENST00000343257 Q8N8P6 123 aa11.54□□□□□ -0.56
CLCN1-201ENST00000343257 TRBV7-3A0A075B6L6 115 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 DLX6P56179 175 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 FAM215AQ9Y5M1 114 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 LAGE3Q14657 143 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 PIFOQ8TCI5 191 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 C1QTNF4Q9BXJ3 329 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 ONECUT1Q9UBC0 465 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 FABP5P3A8MUU1 101 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 TIMM23O14925 209 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 CEACAM4O75871 244 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 C3orf36Q3SXR2 165 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 KLHL30-AS1Q8NEE0 82 aa11.53□□□□□ -0.56
CLCN1-201ENST00000343257 ZNF48Q96MX3 618 aaPredicted RBP11.53□□□□□ -0.56
CLCN1-201ENST00000343257 PIEZO2Q9H5I5 2752 aa11.52□□□□□ -0.56
CLCN1-201ENST00000343257 COL27A1Q8IZC6 1860 aaPredicted RBP11.52□□□□□ -0.56
CLCN1-201ENST00000343257 A0A087WX48 190 aa11.52□□□□□ -0.57
CLCN1-201ENST00000343257 PLEKHB2Q96CS7 222 aa11.52□□□□□ -0.57
CLCN1-201ENST00000343257 MYMXA0A1B0GTQ4 84 aa11.52□□□□□ -0.57
CLCN1-201ENST00000343257 TMEM238LA0A1B0GVL6 79 aa11.52□□□□□ -0.57
CLCN1-201ENST00000343257 PRSS29PA6NIE9 313 aa11.52□□□□□ -0.57
CLCN1-201ENST00000343257 BUB1B-PAK6H3BSN5 160 aa11.52□□□□□ -0.57
CLCN1-201ENST00000343257 CD59P13987 128 aa11.52□□□□□ -0.57
CLCN1-201ENST00000343257 Q6ZUT4 128 aa11.52□□□□□ -0.57
CLCN1-201ENST00000343257 DYNLRB1Q9NP97 96 aa11.52□□□□□ -0.57
CLCN1-201ENST00000343257 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
CLCN1-201ENST00000343257 C11orf21Q9P2W6 132 aa11.51□□□□□ -0.57
CLCN1-201ENST00000343257 SMAD5-AS1Q9Y6J3 95 aa11.51□□□□□ -0.57
CLCN1-201ENST00000343257 ABCA4P78363 2273 aa11.51□□□□□ -0.57
CLCN1-201ENST00000343257 LRBAP50851 2863 aa11.51□□□□□ -0.57
CLCN1-201ENST00000343257 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
CLCN1-201ENST00000343257 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
CLCN1-201ENST00000343257 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
CLCN1-201ENST00000343257 SHISA9B4DS77 424 aa11.51□□□□□ -0.57
CLCN1-201ENST00000343257 SRSF1Q07955 248 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLCN1-201ENST00000343257 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
CLCN1-201ENST00000343257 RAXQ9Y2V3 346 aa11.51□□□□□ -0.57
CLCN1-201ENST00000343257 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
CLCN1-201ENST00000343257 TMEM78Q5T7P6 136 aa11.51□□□□□ -0.57
CLCN1-201ENST00000343257 CFAP126Q5VTH2 177 aa11.51□□□□□ -0.57
CLCN1-201ENST00000343257 DLX4Q92988 240 aaPredicted RBP11.51□□□□□ -0.57
CLCN1-201ENST00000343257 APC2O95996 2303 aa11.5□□□□□ -0.57
CLCN1-201ENST00000343257 ZNF815PA8K554 130 aa11.5□□□□□ -0.57
CLCN1-201ENST00000343257 IGHG4P01861 327 aa11.5□□□□□ -0.57
CLCN1-201ENST00000343257 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
CLCN1-201ENST00000343257 SPANXN1Q5VSR9 72 aa11.5□□□□□ -0.57
CLCN1-201ENST00000343257 CARD19Q96LW7 228 aa11.5□□□□□ -0.57
CLCN1-201ENST00000343257 SCGB3A1Q96QR1 104 aa11.5□□□□□ -0.57
CLCN1-201ENST00000343257 IGKV3D-20A0A0C4DH25 116 aa11.49□□□□□ -0.57
CLCN1-201ENST00000343257 FAM90A27PA6NNH2 459 aa11.49□□□□□ -0.57
CLCN1-201ENST00000343257 SLC25A16P16260 332 aa11.49□□□□□ -0.57
CLCN1-201ENST00000343257 ANAPC13Q9BS18 74 aa11.49□□□□□ -0.57
CLCN1-201ENST00000343257 PRADC1Q9BSG0 188 aa11.49□□□□□ -0.57
CLCN1-201ENST00000343257 RPL7P18124 248 aaKnown RBP11.49□□□□□ -0.57
CLCN1-201ENST00000343257 MFAP4P55083 255 aa11.49□□□□□ -0.57
CLCN1-201ENST00000343257 PDE6HQ13956 83 aa11.49□□□□□ -0.57
CLCN1-201ENST00000343257 TAL2Q16559 108 aa11.49□□□□□ -0.57
CLCN1-201ENST00000343257 RALYQ9UKM9 306 aaKnown RBP11.49□□□□□ -0.57
CLCN1-201ENST00000343257 RELNP78509 3460 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 TSPAN13O95857 204 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 HIF1ANQ9NWT6 349 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 VSTM5A8MXK1 200 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 B5MCH6 92 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 H7C1H1 209 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 H7C2G1 150 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 IGLV1-47P01700 117 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 SCGB1C2P0DMR2 95 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 PRTN3P24158 256 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 KLRD1Q13241 179 aa11.48□□□□□ -0.57
CLCN1-201ENST00000343257 F8VRH5 84 aa11.47□□□□□ -0.57
CLCN1-201ENST00000343257 PLNP26678 52 aa11.47□□□□□ -0.57
CLCN1-201ENST00000343257 NRACQ8N912 160 aa11.47□□□□□ -0.57
CLCN1-201ENST00000343257 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
CLCN1-201ENST00000343257 CDX4O14627 284 aaPredicted RBP11.47□□□□□ -0.57
CLCN1-201ENST00000343257 FANCD2OSQ96PS1 177 aa11.47□□□□□ -0.57
CLCN1-201ENST00000343257 M0R381 172 aa11.46□□□□□ -0.57
CLCN1-201ENST00000343257 SPTBN2O15020 2390 aa11.46□□□□□ -0.57
CLCN1-201ENST00000343257 PSMG4Q5JS54 123 aa11.46□□□□□ -0.58
CLCN1-201ENST00000343257 RPL39LQ96EH5 51 aaKnown RBP11.46□□□□□ -0.58
CLCN1-201ENST00000343257 F8W735 103 aaPredicted RBP11.45□□□□□ -0.58
CLCN1-201ENST00000343257 TCL1BO95988 128 aa11.45□□□□□ -0.58
CLCN1-201ENST00000343257 C8orf31Q8N9H6 132 aa11.45□□□□□ -0.58
CLCN1-201ENST00000343257 NDPQ00604 133 aa11.44□□□□□ -0.58
CLCN1-201ENST00000343257 DCHS2Q6V1P9 2916 aa11.44□□□□□ -0.58
CLCN1-201ENST00000343257 TRBV20-1A0A075B6N2 111 aa11.44□□□□□ -0.58
CLCN1-201ENST00000343257 NBR2O15453 112 aa11.44□□□□□ -0.58
CLCN1-201ENST00000343257 MGPP08493 103 aa11.44□□□□□ -0.58
CLCN1-201ENST00000343257 AGPAT4-IT1Q9H0P7 198 aa11.44□□□□□ -0.58
CLCN1-201ENST00000343257 RAB1BQ9H0U4 201 aa11.44□□□□□ -0.58
CLCN1-201ENST00000343257 ASH1LQ9NR48 2969 aaKnown RBP11.44□□□□□ -0.58
CLCN1-201ENST00000343257 TNFRSF13BO14836 293 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms