RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 C2orf70A6NJV1 201 aa15.08■□□□□ 0
RTN1-202ENST00000342503 LINC01619G3V211 115 aa15.08■□□□□ 0
RTN1-202ENST00000342503 RNASE1P07998 156 aaKnown RBP15.08■□□□□ 0
RTN1-202ENST00000342503 LINC00310P59036 64 aa15.08■□□□□ 0
RTN1-202ENST00000342503 ZNF575Q86XF7 245 aa15.08■□□□□ 0
RTN1-202ENST00000342503 MS4A6AQ9H2W1 248 aa15.08■□□□□ 0
RTN1-202ENST00000342503 F6UB75 175 aa15.07■□□□□ 0
RTN1-202ENST00000342503 ID1P41134 155 aa15.07■□□□□ 0
RTN1-202ENST00000342503 HIST1H1AQ02539 215 aaPredicted RBP15.07■□□□□ 0
RTN1-202ENST00000342503 OR10J3Q5JRS4 329 aa15.07■□□□□ 0
RTN1-202ENST00000342503 HIST2H2BDQ6DRA6 164 aa15.07■□□□□ 0
RTN1-202ENST00000342503 LYZL1Q6UWQ5 148 aa15.07■□□□□ 0
RTN1-202ENST00000342503 OR11H1Q8NG94 326 aa15.07■□□□□ 0
RTN1-202ENST00000342503 ACANP16112 2415 aa15.07■□□□□ 0
RTN1-202ENST00000342503 SERF1AO75920 110 aa15.06■□□□□ 0
RTN1-202ENST00000342503 LINC01559Q495D7 138 aa15.06■□□□□ 0
RTN1-202ENST00000342503 SAMD13Q5VXD3 122 aa15.06■□□□□ 0
RTN1-202ENST00000342503 OR8A1Q8NGG7 326 aa15.06■□□□□ 0
RTN1-202ENST00000342503 TMEM18Q96B42 140 aa15.06■□□□□ 0
RTN1-202ENST00000342503 BORCS7Q96B45 105 aa15.06■□□□□ 0
RTN1-202ENST00000342503 LENEPQ9Y5L5 61 aa15.06■□□□□ 0
RTN1-202ENST00000342503 TFPI2P48307 235 aa15.06■□□□□ 0
RTN1-202ENST00000342503 KLHL30-AS1Q8NEE0 82 aa15.06■□□□□ 0
RTN1-202ENST00000342503 OR1N2Q8NGR9 330 aa15.06■□□□□ 0
RTN1-202ENST00000342503 DPF1Q92782 380 aa15.06■□□□□ 0
RTN1-202ENST00000342503 DUX3Q96PT4 197 aa15.06■□□□□ 0
RTN1-202ENST00000342503 LY6G6DO95868 133 aa15.05■□□□□ -0
RTN1-202ENST00000342503 PYY3Q5JQD4 70 aa15.05■□□□□ -0
RTN1-202ENST00000342503 PRR9Q5T870 116 aa15.05■□□□□ -0
RTN1-202ENST00000342503 GATD1Q8NB37 220 aa15.05■□□□□ -0
RTN1-202ENST00000342503 ALKBH7Q9BT30 221 aaPredicted RBP15.05■□□□□ -0
RTN1-202ENST00000342503 C11orf21Q9P2W6 132 aa15.05■□□□□ -0
RTN1-202ENST00000342503 HECTD1Q9ULT8 2610 aa15.05■□□□□ -0
RTN1-202ENST00000342503 A0A1B0GW15 77 aa15.04■□□□□ -0
RTN1-202ENST00000342503 IGLC6P0CF74 106 aa15.04■□□□□ -0
RTN1-202ENST00000342503 ESDP10768 282 aa15.04■□□□□ -0
RTN1-202ENST00000342503 ADAMTSL5Q6ZMM2 481 aa15.04■□□□□ -0
RTN1-202ENST00000342503 FER1L6-AS1Q8NA97 138 aa15.04■□□□□ -0
RTN1-202ENST00000342503 ZNF418Q8TF45 676 aaPredicted RBP15.04■□□□□ -0
RTN1-202ENST00000342503 IQCJQ1A5X6 159 aa15.03■□□□□ -0
RTN1-202ENST00000342503 Q6ZQT7 251 aa15.03■□□□□ -0
RTN1-202ENST00000342503 C18orf32Q8TCD1 76 aa15.03■□□□□ -0
RTN1-202ENST00000342503 C16orf95Q9H693 158 aa15.03■□□□□ -0
RTN1-202ENST00000342503 IGKV3D-20A0A0C4DH25 116 aa15.03■□□□□ -0
RTN1-202ENST00000342503 K7EQG2 157 aa15.03■□□□□ -0
RTN1-202ENST00000342503 M0QZ24 198 aa15.03■□□□□ -0
RTN1-202ENST00000342503 CTRLP40313 264 aa15.03■□□□□ -0
RTN1-202ENST00000342503 ZFAND2AQ8N6M9 145 aa15.03■□□□□ -0
RTN1-202ENST00000342503 FAM19A4Q96LR4 140 aa15.03■□□□□ -0
RTN1-202ENST00000342503 CUBNO60494 3623 aa15.02■□□□□ -0
RTN1-202ENST00000342503 MUC21A0A0G2JKD1 596 aa15.02□□□□□ -0.01
RTN1-202ENST00000342503 MUC21A0A140T8X8 626 aa15.02□□□□□ -0.01
RTN1-202ENST00000342503 HILS1P60008 231 aa15.02□□□□□ -0.01
RTN1-202ENST00000342503 SSTP61278 116 aa15.02□□□□□ -0.01
RTN1-202ENST00000342503 MUC21Q5SSG8 566 aa15.02□□□□□ -0.01
RTN1-202ENST00000342503 RCHY1Q96PM5 261 aa15.02□□□□□ -0.01
RTN1-202ENST00000342503 LOC102724200A0A096LPH7 203 aaPredicted RBP15.01□□□□□ -0.01
RTN1-202ENST00000342503 J3KRW8 73 aa15.01□□□□□ -0.01
RTN1-202ENST00000342503 ZNF688P0C7X2 276 aa15.01□□□□□ -0.01
RTN1-202ENST00000342503 CD28P10747 220 aa15.01□□□□□ -0.01
RTN1-202ENST00000342503 C11orf44Q8N8P7 122 aa15□□□□□ -0.01
RTN1-202ENST00000342503 LINC01006Q8NI28 216 aa15□□□□□ -0.01
RTN1-202ENST00000342503 NIT2Q9NQR4 276 aa15□□□□□ -0.01
RTN1-202ENST00000342503 PEMTQ9UBM1 199 aa15□□□□□ -0.01
RTN1-202ENST00000342503 MYO9AB2RTY4 2548 aa15□□□□□ -0.01
RTN1-202ENST00000342503 PSMG4Q5JS54 123 aa15□□□□□ -0.01
RTN1-202ENST00000342503 OR9G4Q8NGQ1 327 aa15□□□□□ -0.01
RTN1-202ENST00000342503 WFDC12Q8WWY7 111 aa15□□□□□ -0.01
RTN1-202ENST00000342503 DLX4Q92988 240 aaPredicted RBP15□□□□□ -0.01
RTN1-202ENST00000342503 SNRPD3P62318 126 aaKnown RBP14.99□□□□□ -0.01
RTN1-202ENST00000342503 PAFAH1B2P68402 229 aa14.99□□□□□ -0.01
RTN1-202ENST00000342503 ZNF493Q6ZR52 646 aa14.99□□□□□ -0.01
RTN1-202ENST00000342503 TRBV7-9A0A0J9YWB2 115 aa14.98□□□□□ -0.01
RTN1-202ENST00000342503 KCNS1Q96KK3 526 aa14.98□□□□□ -0.01
RTN1-202ENST00000342503 A0A1W2PRX2 142 aa14.97□□□□□ -0.01
RTN1-202ENST00000342503 GPX1P07203 203 aa14.97□□□□□ -0.01
RTN1-202ENST00000342503 TWIST1Q15672 202 aa14.97□□□□□ -0.01
RTN1-202ENST00000342503 CDPF1Q6NVV7 123 aa14.97□□□□□ -0.01
RTN1-202ENST00000342503 APRG1Q8IVJ8 170 aa14.97□□□□□ -0.01
RTN1-202ENST00000342503 RAX2Q96IS3 184 aa14.97□□□□□ -0.01
RTN1-202ENST00000342503 TRAV21A0A0B4J279 112 aa14.97□□□□□ -0.01
RTN1-202ENST00000342503 CSN3P07498 182 aa14.97□□□□□ -0.01
RTN1-202ENST00000342503 CD33P20138 364 aa14.97□□□□□ -0.01
RTN1-202ENST00000342503 RNASE4P34096 147 aaKnown RBP14.97□□□□□ -0.01
RTN1-202ENST00000342503 PCP4L1A6NKN8 68 aa14.96□□□□□ -0.01
RTN1-202ENST00000342503 NTF3P20783 257 aa14.96□□□□□ -0.01
RTN1-202ENST00000342503 KIR3DS1Q14943 382 aa14.96□□□□□ -0.01
RTN1-202ENST00000342503 JOSD1Q15040 202 aaPredicted RBP14.96□□□□□ -0.01
RTN1-202ENST00000342503 CNFNQ9BYD5 112 aa14.96□□□□□ -0.01
RTN1-202ENST00000342503 SAMD10Q9BYL1 202 aa14.96□□□□□ -0.01
RTN1-202ENST00000342503 CITED2Q99967 270 aaPredicted RBP14.95□□□□□ -0.02
RTN1-202ENST00000342503 NAGKQ9UJ70 344 aa14.95□□□□□ -0.02
RTN1-202ENST00000342503 A0A0J9YX75 114 aa14.95□□□□□ -0.02
RTN1-202ENST00000342503 FAM104BQ5XKR9 115 aa14.94□□□□□ -0.02
RTN1-202ENST00000342503 JMJD8Q96S16 334 aa14.94□□□□□ -0.02
RTN1-202ENST00000342503 MSRB1Q9NZV6 116 aa14.94□□□□□ -0.02
RTN1-202ENST00000342503 TSSC4Q9Y5U2 329 aaPredicted RBP14.94□□□□□ -0.02
RTN1-202ENST00000342503 NDUFA7O95182 113 aa14.93□□□□□ -0.02
RTN1-202ENST00000342503 PMCHP20382 165 aa14.93□□□□□ -0.02
RTN1-202ENST00000342503 FHL3Q13643 280 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms