RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 CBY3A6NI87 242 aa9.48□□□□□ -0.89
TUBD1-202ENST00000340993 IGLV2-11P01706 119 aa9.48□□□□□ -0.89
TUBD1-202ENST00000340993 AKR1C3P42330 323 aa9.48□□□□□ -0.89
TUBD1-202ENST00000340993 FLI1Q01543 452 aaPredicted RBP9.48□□□□□ -0.89
TUBD1-202ENST00000340993 C11orf68Q9H3H3 251 aaKnown RBP9.48□□□□□ -0.89
TUBD1-202ENST00000340993 H7BYZ3 331 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 CRISP2P16562 243 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 FAM222AQ5U5X8 452 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 NDFIP1Q9BT67 221 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 DEFB130BP0DP73 79 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 DEFB130AP0DP74 79 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 HTN3P15516 51 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 ZNF80P51504 273 aaPredicted RBP9.47□□□□□ -0.89
TUBD1-202ENST00000340993 TAS2R60P59551 318 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 UBE2G1P62253 170 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 Q6ZTC4 211 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 Q86TA4 180 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 CCDC28AQ8IWP9 274 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 TMEM256Q8N2U0 113 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 TMEM75Q8N9X5 138 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 ARL2-SNX15V9GYD0 113 aa9.47□□□□□ -0.89
TUBD1-202ENST00000340993 ZNF324O75467 553 aaPredicted RBP9.46□□□□□ -0.9
TUBD1-202ENST00000340993 GCGP01275 180 aa9.46□□□□□ -0.9
TUBD1-202ENST00000340993 NEU1Q99519 415 aa9.46□□□□□ -0.9
TUBD1-202ENST00000340993 DERL1Q9BUN8 251 aa9.46□□□□□ -0.9
TUBD1-202ENST00000340993 NKX6-2Q9C056 277 aaPredicted RBP9.46□□□□□ -0.9
TUBD1-202ENST00000340993 NOP10Q9NPE3 64 aaKnown RBP9.46□□□□□ -0.9
TUBD1-202ENST00000340993 MANBALQ9NQG1 85 aa9.46□□□□□ -0.9
TUBD1-202ENST00000340993 SMIM9A6NGZ8 99 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 PPT1P50897 306 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 CEBPGP53567 150 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 GSN-AS1Q9NRJ2 163 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 SERTM2A0A1B0GWG4 89 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 IFNA1P01562 189 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 BCL2P10415 239 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 BLOC1S1P78537 153 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 TMEM183BQ1AE95 376 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 C12orf74Q32Q52 190 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 CASC10Q5T4H9 136 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 TEX261Q6UWH6 196 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 TMEM183AQ8IXX5 376 aa9.45□□□□□ -0.9
TUBD1-202ENST00000340993 NACAE9PAV3 2078 aa9.44□□□□□ -0.9
TUBD1-202ENST00000340993 IGHV1OR15-1A0A075B7D0 117 aa9.44□□□□□ -0.9
TUBD1-202ENST00000340993 PLAC8L1A1L4L8 177 aa9.44□□□□□ -0.9
TUBD1-202ENST00000340993 RNASE8Q8TDE3 154 aaKnown RBP9.44□□□□□ -0.9
TUBD1-202ENST00000340993 PHLDA1Q8WV24 401 aaPredicted RBP9.44□□□□□ -0.9
TUBD1-202ENST00000340993 C16orf74Q96GX8 76 aa9.44□□□□□ -0.9
TUBD1-202ENST00000340993 PYGO2Q9BRQ0 406 aa9.44□□□□□ -0.9
TUBD1-202ENST00000340993 DKK2Q9UBU2 259 aa9.44□□□□□ -0.9
TUBD1-202ENST00000340993 TIMM8BQ9Y5J9 83 aaPredicted RBP9.44□□□□□ -0.9
TUBD1-202ENST00000340993 GNRH2O43555 120 aa9.43□□□□□ -0.9
TUBD1-202ENST00000340993 SPART-AS1P0CW21 52 aa9.43□□□□□ -0.9
TUBD1-202ENST00000340993 ANXA2RQ3ZCQ2 193 aa9.43□□□□□ -0.9
TUBD1-202ENST00000340993 SMUG1Q53HV7 270 aa9.43□□□□□ -0.9
TUBD1-202ENST00000340993 TOR2AQ5JU69 321 aa9.43□□□□□ -0.9
TUBD1-202ENST00000340993 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
TUBD1-202ENST00000340993 EIF4E3Q8N5X7 224 aaKnown RBP9.43□□□□□ -0.9
TUBD1-202ENST00000340993 ARL6IP6Q8N6S5 226 aa9.43□□□□□ -0.9
TUBD1-202ENST00000340993 ZNF680Q8NEM1 530 aa9.43□□□□□ -0.9
TUBD1-202ENST00000340993 TMEM263Q8WUH6 116 aaKnown RBP9.43□□□□□ -0.9
TUBD1-202ENST00000340993 ZC2HC1AQ96GY0 325 aa9.43□□□□□ -0.9
TUBD1-202ENST00000340993 C20orf144Q9BQM9 153 aa9.43□□□□□ -0.9
TUBD1-202ENST00000340993 SNURFLB1AK76 121 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 DAD1P61803 113 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
TUBD1-202ENST00000340993 PRR27Q6MZM9 219 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 FAM159AQ6UWV7 190 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 C2CD4CQ8TF44 421 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 FMC1Q96HJ9 113 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 MDFICQ9P1T7 246 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 KLF12Q9Y4X4 402 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 LENEPQ9Y5L5 61 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 DYNC2H1Q8NCM8 4307 aaKnown RBP9.42□□□□□ -0.9
TUBD1-202ENST00000340993 TMSB15BA0A087X1C1 80 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 TRAV21A0A0B4J279 112 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 GAGE12BA1L429 117 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 RAB19A4D1S5 217 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 TMEM189A5PLL7 270 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 M0R036 132 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 GAGE7O76087 117 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 NMBP08949 121 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 GAGE12FP0CL80 117 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 GAGE12GP0CL81 117 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 GAGE12IP0CL82 117 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 RPL35P42766 123 aaKnown RBP9.42□□□□□ -0.9
TUBD1-202ENST00000340993 ZNF674Q2M3X9 581 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 Q6AWC8 147 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 MED9Q9NWA0 146 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 C11orf21Q9P2W6 132 aa9.42□□□□□ -0.9
TUBD1-202ENST00000340993 KMT2CQ8NEZ4 4911 aaKnown RBP9.41□□□□□ -0.9
TUBD1-202ENST00000340993 PGPEP1LA6NFU8 196 aa9.41□□□□□ -0.9
TUBD1-202ENST00000340993 C3orf84H3BNL1 204 aa9.41□□□□□ -0.9
TUBD1-202ENST00000340993 EIF5A2Q9GZV4 153 aaKnown RBP9.41□□□□□ -0.9
TUBD1-202ENST00000340993 MRPL16Q9NX20 251 aaKnown RBP9.41□□□□□ -0.9
TUBD1-202ENST00000340993 VAX2Q9UIW0 290 aa9.41□□□□□ -0.9
TUBD1-202ENST00000340993 TRGV1A0A0A0MS02 117 aa9.4□□□□□ -0.9
TUBD1-202ENST00000340993 TRBV7-9A0A0J9YWB2 115 aa9.4□□□□□ -0.9
TUBD1-202ENST00000340993 RBFOX3A6NFN3 312 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms