RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 TEX49A0A1B0GTD5 131 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 IGKV1D-12P01611 117 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 HERVK_113P61574 105 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 GFRALQ6UXV0 394 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 ZNF818PQ6ZRF7 136 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 Q8N7P7 452 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 FAM90A10PA6NDY2 464 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 IGLV1-44P01699 117 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 RPL13AP40429 203 aaKnown RBP13.23□□□□□ -0.29
CDK11B-201ENST00000340677 CXorf67Q86X51 503 aaPredicted RBP13.23□□□□□ -0.29
CDK11B-201ENST00000340677 RITA1Q96K30 269 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 CHD6Q8TD26 2715 aa13.23□□□□□ -0.29
CDK11B-201ENST00000340677 TRAV41A0A0B4J266 112 aa13.22□□□□□ -0.29
CDK11B-201ENST00000340677 C17orf77Q96MU5 243 aa13.22□□□□□ -0.29
CDK11B-201ENST00000340677 EDDM3BP56851 147 aa13.22□□□□□ -0.29
CDK11B-201ENST00000340677 PSMG4Q5JS54 123 aa13.22□□□□□ -0.29
CDK11B-201ENST00000340677 PDPNQ86YL7 162 aa13.22□□□□□ -0.29
CDK11B-201ENST00000340677 C11orf53Q8IXP5 236 aa13.22□□□□□ -0.29
CDK11B-201ENST00000340677 RPRMLQ8N4K4 120 aa13.22□□□□□ -0.29
CDK11B-201ENST00000340677 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
CDK11B-201ENST00000340677 NABP2Q9BQ15 211 aa13.22□□□□□ -0.29
CDK11B-201ENST00000340677 BORCS8Q96FH0 119 aa13.21□□□□□ -0.29
CDK11B-201ENST00000340677 PLPPR2Q96GM1 343 aa13.21□□□□□ -0.29
CDK11B-201ENST00000340677 ZGRF1Q86YA3 2104 aa13.21□□□□□ -0.29
CDK11B-201ENST00000340677 MRPS12O15235 138 aaKnown RBP13.21□□□□□ -0.29
CDK11B-201ENST00000340677 IGF2BP2-AS1Q96M15 143 aa13.21□□□□□ -0.29
CDK11B-201ENST00000340677 ZNF442Q9H7R0 627 aa13.21□□□□□ -0.29
CDK11B-201ENST00000340677 NGFP01138 241 aa13.2□□□□□ -0.3
CDK11B-201ENST00000340677 CRIP2P52943 208 aaPredicted RBP13.2□□□□□ -0.3
CDK11B-201ENST00000340677 SLC25A15Q9Y619 301 aa13.2□□□□□ -0.3
CDK11B-201ENST00000340677 FRYQ5TBA9 3013 aa13.2□□□□□ -0.3
CDK11B-201ENST00000340677 CEP295Q9C0D2 2601 aa13.2□□□□□ -0.3
CDK11B-201ENST00000340677 DRAM1Q8N682 238 aa13.2□□□□□ -0.3
CDK11B-201ENST00000340677 AAMDCQ9H7C9 122 aa13.2□□□□□ -0.3
CDK11B-201ENST00000340677 INS-IGF2F8WCM5 200 aa13.19□□□□□ -0.3
CDK11B-201ENST00000340677 ZNF137PP52743 207 aa13.19□□□□□ -0.3
CDK11B-201ENST00000340677 OTORQ9NRC9 128 aa13.19□□□□□ -0.3
CDK11B-201ENST00000340677 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
CDK11B-201ENST00000340677 PSMB8P28062 276 aa13.19□□□□□ -0.3
CDK11B-201ENST00000340677 LOXL1Q08397 574 aaPredicted RBP13.19□□□□□ -0.3
CDK11B-201ENST00000340677 ZFHX4Q86UP3 3567 aa13.19□□□□□ -0.3
CDK11B-201ENST00000340677 VMA21Q3ZAQ7 101 aa13.18□□□□□ -0.3
CDK11B-201ENST00000340677 MRPL20Q9BYC9 149 aaKnown RBP13.18□□□□□ -0.3
CDK11B-201ENST00000340677 C15orf61A6NNL5 157 aa13.18□□□□□ -0.3
CDK11B-201ENST00000340677 HSPB6O14558 160 aa13.18□□□□□ -0.3
CDK11B-201ENST00000340677 NDUFC2O95298 119 aa13.18□□□□□ -0.3
CDK11B-201ENST00000340677 SLC25A48Q6ZT89 311 aaKnown RBP13.18□□□□□ -0.3
CDK11B-201ENST00000340677 FAM240AA0A1B0GVK7 77 aa13.17□□□□□ -0.3
CDK11B-201ENST00000340677 NSUN5P1Q3KNT7 163 aa13.17□□□□□ -0.3
CDK11B-201ENST00000340677 LOC400499M0QZD8 3231 aa13.17□□□□□ -0.3
CDK11B-201ENST00000340677 IGKV1D-13A0A0B4J2D9 117 aa13.17□□□□□ -0.3
CDK11B-201ENST00000340677 PMS2P5A8MQ11 134 aa13.17□□□□□ -0.3
CDK11B-201ENST00000340677 IGKV1-13P0DP09 117 aa13.17□□□□□ -0.3
CDK11B-201ENST00000340677 COL8A2P25067 703 aa13.17□□□□□ -0.3
CDK11B-201ENST00000340677 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
CDK11B-201ENST00000340677 A0A0G2JNJ9 132 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 IQCF6A8MYZ5 107 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 EPM2AB3EWF7 344 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 NPIPB11E5RHQ5 1161 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 PYYP10082 97 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 LEPP41159 167 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 PRSS3P2Q8NHM4 247 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 UPK3BQ9BT76 320 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 Q9UFV3 132 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 PGPA6NDG6 321 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 ESPL1Q14674 2120 aa13.16□□□□□ -0.3
CDK11B-201ENST00000340677 CA6P23280 308 aa13.15□□□□□ -0.3
CDK11B-201ENST00000340677 UBE2D1P51668 147 aa13.15□□□□□ -0.3
CDK11B-201ENST00000340677 CCL28Q9NRJ3 127 aa13.15□□□□□ -0.3
CDK11B-201ENST00000340677 IGHV1-18A0A0C4DH31 117 aa13.15□□□□□ -0.3
CDK11B-201ENST00000340677 WI2-2373I1.2A0A1W2PRP0 233 aa13.15□□□□□ -0.3
CDK11B-201ENST00000340677 PEX7O00628 323 aa13.15□□□□□ -0.3
CDK11B-201ENST00000340677 H3BMM0 161 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 DAZAP2Q15038 168 aaPredicted RBP13.14□□□□□ -0.31
CDK11B-201ENST00000340677 UBE2WQ96B02 151 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 MRPL53Q96EL3 112 aaKnown RBP13.14□□□□□ -0.31
CDK11B-201ENST00000340677 GNG12Q9UBI6 72 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 LINC01619G3V211 115 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 P01737 135 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 CT83Q5H943 113 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 MKXQ8IYA7 352 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 SSMEM1Q8WWF3 244 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 ZMAT4Q9H898 229 aa13.14□□□□□ -0.31
CDK11B-201ENST00000340677 MGAQ8IWI9 3026 aa13.13□□□□□ -0.31
CDK11B-201ENST00000340677 ZNF22P17026 224 aaPredicted RBP13.13□□□□□ -0.31
CDK11B-201ENST00000340677 FGF23Q9GZV9 251 aaPredicted RBP13.13□□□□□ -0.31
CDK11B-201ENST00000340677 ATRXP46100 2492 aa13.13□□□□□ -0.31
CDK11B-201ENST00000340677 ATOX1O00244 68 aa13.12□□□□□ -0.31
CDK11B-201ENST00000340677 RTL8AQ9BWD3 113 aa13.12□□□□□ -0.31
CDK11B-201ENST00000340677 TRAV12-2A0A075B6T6 113 aa13.12□□□□□ -0.31
CDK11B-201ENST00000340677 IGKV1-39P01597 117 aa13.12□□□□□ -0.31
CDK11B-201ENST00000340677 IGKV1-5P01602 117 aa13.12□□□□□ -0.31
CDK11B-201ENST00000340677 IGKV1D-39P04432 117 aa13.12□□□□□ -0.31
CDK11B-201ENST00000340677 Q71RC1 249 aaPredicted RBP13.12□□□□□ -0.31
CDK11B-201ENST00000340677 KLF14Q8TD94 323 aaPredicted RBP13.12□□□□□ -0.31
CDK11B-201ENST00000340677 IGF2RP11717 2491 aa13.12□□□□□ -0.31
CDK11B-201ENST00000340677 TCRAP04437 139 aa13.11□□□□□ -0.31
CDK11B-201ENST00000340677 LOXL3P58215 753 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms