RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 BLCAPP62952 87 aa9.92□□□□□ -0.82
CDK5RAP1-201ENST00000339269 MUC21Q5SSG8 566 aa9.92□□□□□ -0.82
CDK5RAP1-201ENST00000339269 IL17RELQ6ZVW7 336 aa9.92□□□□□ -0.82
CDK5RAP1-201ENST00000339269 METTL26Q96S19 204 aa9.92□□□□□ -0.82
CDK5RAP1-201ENST00000339269 SLC50A1Q9BRV3 221 aa9.92□□□□□ -0.82
CDK5RAP1-201ENST00000339269 AGPAT4-IT1Q9H0P7 198 aa9.92□□□□□ -0.82
CDK5RAP1-201ENST00000339269 KLK15Q9H2R5 256 aa9.92□□□□□ -0.82
CDK5RAP1-201ENST00000339269 C11orf21Q9P2W6 132 aa9.92□□□□□ -0.82
CDK5RAP1-201ENST00000339269 SMAD7O15105 426 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 IGLC3P0DOY3 106 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 S100A7P31151 101 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 FAM104BQ5XKR9 115 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 BEX4Q9NWD9 120 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 RBX1P62877 108 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 CFHR3Q02985 330 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 LINC01559Q495D7 138 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 FAM106AQ4KMX7 169 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 DMRTA1Q5VZB9 504 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 ZNF705AQ6ZN79 300 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 AMN1Q8IY45 258 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 C20orf173Q96LM9 149 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 CNFNQ9BYD5 112 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 HIF1ANQ9NWT6 349 aa9.91□□□□□ -0.82
CDK5RAP1-201ENST00000339269 A0A096LNJ9 63 aa9.9□□□□□ -0.82
CDK5RAP1-201ENST00000339269 Q6ZQT7 251 aa9.9□□□□□ -0.82
CDK5RAP1-201ENST00000339269 FER1L6-AS1Q8NA97 138 aa9.9□□□□□ -0.82
CDK5RAP1-201ENST00000339269 MRPL53Q96EL3 112 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP1-201ENST00000339269 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.9□□□□□ -0.822e-7■■■■□ 21.8
CDK5RAP1-201ENST00000339269 IGKV3D-20A0A0C4DH25 116 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 D6R8Y8 96 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 M0R143 59 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 SOCS3O14543 225 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 DLEU1O43261 78 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 CSN3P07498 182 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 ARL3P36405 182 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 LOXL1Q08397 574 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 MRPL51Q4U2R6 128 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 LCNL1Q6ZST4 164 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 SMIM15Q7Z3B0 74 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 MRPL52Q86TS9 123 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 FOXC2Q99958 501 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 TMEM70Q9BUB7 260 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 ZNF469Q96JG9 3925 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 H3BUA1 57 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 SYS1-DBNDD2H3BUS1 97 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 IGLV1-40P01703 118 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 RPS20P60866 119 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
CDK5RAP1-201ENST00000339269 FLNAP21333 2647 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP1-201ENST00000339269 CSPG4Q6UVK1 2322 aa9.88□□□□□ -0.83
CDK5RAP1-201ENST00000339269 ODF1Q14990 250 aa9.88□□□□□ -0.83
CDK5RAP1-201ENST00000339269 PRR9Q5T870 116 aa9.88□□□□□ -0.83
CDK5RAP1-201ENST00000339269 C9orf47Q6ZRZ4 202 aa9.88□□□□□ -0.83
CDK5RAP1-201ENST00000339269 LRRC75A-AS1Q8N1F1 130 aa9.88□□□□□ -0.83
CDK5RAP1-201ENST00000339269 TRAV9-2A0A087WT02 112 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 FABP5P3A8MUU1 101 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 B4DSR2 109 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 NDUFA4O00483 81 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 LEPROTL1O95214 131 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 IGHV3-11P01762 117 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 IGLL1P15814 213 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 SIGLEC8Q9NYZ4 499 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 ZANQ9Y493 2812 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 SMKR1H3BMG3 65 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 OR5AL1P0C617 328 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 IFI27P40305 119 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 Q5PR19 223 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 USMG5Q96IX5 58 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 CLUHP3Q96NS8 147 aa9.87□□□□□ -0.83
CDK5RAP1-201ENST00000339269 ORM1P02763 201 aa9.86□□□□□ -0.83
CDK5RAP1-201ENST00000339269 FOXE3Q13461 319 aa9.86□□□□□ -0.83
CDK5RAP1-201ENST00000339269 PRELID3AQ96N28 172 aa9.86□□□□□ -0.83
CDK5RAP1-201ENST00000339269 MCRIP2Q9BUT9 160 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP1-201ENST00000339269 AP5S1Q9NUS5 200 aa9.86□□□□□ -0.83
CDK5RAP1-201ENST00000339269 UQCR10Q9UDW1 63 aa9.86□□□□□ -0.83
CDK5RAP1-201ENST00000339269 IGHV7-4-1A0A0J9YVY3 117 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 TMEM238C9JI98 176 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 NPYP01303 97 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 DSCR9P59020 149 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 DEFB1P60022 68 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 WFDC11Q8NEX6 87 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 ZNF747Q9BV97 191 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 TP73-AS1Q9UF72 201 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 ACANP16112 2415 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 HIVEP1P15822 2718 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 OR4C46A6NHA9 309 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 NCR2O95944 276 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 IGHV4-59P01825 116 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 EDN2P20800 178 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 HIST1H1AQ02539 215 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 TWIST1Q15672 202 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 DEFB112Q30KQ8 113 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 C9orf139Q6ZV77 190 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 KRTAP1-3Q8IUG1 177 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 ORMDL3Q8N138 153 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 OR4X2Q8NGF9 303 aa9.85□□□□□ -0.83
CDK5RAP1-201ENST00000339269 PF4V1P10720 104 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms