RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 ZNF479Q96JC4 524 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 RAB1BQ9H0U4 201 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 H3BRM9 83 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 DYNAPQ8N1N2 210 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 A0A1W2PPM0 123 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 B9A039 149 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 DPM2O94777 84 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 FSTL3O95633 263 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 C5orf64Q2M2E5 130 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 FAM74A4Q5TZK3 123 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 TNRC18O15417 2968 aaPredicted RBP11.08□□□□□ -0.64
PCDH8-201ENST00000338862 NPIPB6E9PJ23 425 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 K7EP34 96 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 CRYGCP07315 174 aa11.08□□□□□ -0.64
PCDH8-201ENST00000338862 DLX6P56179 175 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 LY6EQ16553 131 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 OR9G4Q8NGQ1 327 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 TRGV3P03979 118 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 TTC9CQ8N5M4 171 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 OR11H2Q8NH07 326 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 SCGB3A1Q96QR1 104 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 CD300EQ496F6 205 aaPredicted RBP11.07□□□□□ -0.64
PCDH8-201ENST00000338862 Q6ZQT7 251 aa11.07□□□□□ -0.64
PCDH8-201ENST00000338862 MRPL16Q9NX20 251 aaKnown RBP11.07□□□□□ -0.64
PCDH8-201ENST00000338862 TSSC4Q9Y5U2 329 aaPredicted RBP11.07□□□□□ -0.64
PCDH8-201ENST00000338862 SPENQ96T58 3664 aaKnown RBP11.06□□□□□ -0.64
PCDH8-201ENST00000338862 A0A1B0GW15 77 aa11.06□□□□□ -0.64
PCDH8-201ENST00000338862 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
PCDH8-201ENST00000338862 CRXO43186 299 aaPredicted RBP11.06□□□□□ -0.64
PCDH8-201ENST00000338862 PHLDA3Q9Y5J5 127 aa11.06□□□□□ -0.64
PCDH8-201ENST00000338862 WFDC2Q14508 124 aa11.06□□□□□ -0.64
PCDH8-201ENST00000338862 DTX2Q86UW9 622 aa11.06□□□□□ -0.64
PCDH8-201ENST00000338862 C14orf178Q8N769 122 aaPredicted RBP11.06□□□□□ -0.64
PCDH8-201ENST00000338862 IGHV3-64A0A075B6Q5 118 aa11.06□□□□□ -0.64
PCDH8-201ENST00000338862 LGALS9BQ3B8N2 356 aa11.06□□□□□ -0.64
PCDH8-201ENST00000338862 LGALS9CQ6DKI2 356 aa11.06□□□□□ -0.64
PCDH8-201ENST00000338862 LINC00311Q8N616 119 aa11.06□□□□□ -0.64
PCDH8-201ENST00000338862 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
PCDH8-201ENST00000338862 C3orf36Q3SXR2 165 aa11.05□□□□□ -0.64
PCDH8-201ENST00000338862 SVEP1Q4LDE5 3571 aa11.05□□□□□ -0.64
PCDH8-201ENST00000338862 PSMB2P49721 201 aa11.05□□□□□ -0.64
PCDH8-201ENST00000338862 IGFL2Q6UWQ7 119 aa11.05□□□□□ -0.64
PCDH8-201ENST00000338862 CFHR4Q92496 578 aa11.05□□□□□ -0.64
PCDH8-201ENST00000338862 TMEM14CQ9P0S9 112 aa11.05□□□□□ -0.64
PCDH8-201ENST00000338862 IGLV1-47P01700 117 aa11.04□□□□□ -0.64
PCDH8-201ENST00000338862 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
PCDH8-201ENST00000338862 Q1RN00 199 aa11.04□□□□□ -0.64
PCDH8-201ENST00000338862 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
PCDH8-201ENST00000338862 TRBV25-1A0A075B6N4 114 aa11.04□□□□□ -0.64
PCDH8-201ENST00000338862 SHISA9B4DS77 424 aa11.04□□□□□ -0.64
PCDH8-201ENST00000338862 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.04□□□□□ -0.64
PCDH8-201ENST00000338862 CENPEQ02224 2701 aa11.04□□□□□ -0.64
PCDH8-201ENST00000338862 USP9XQ93008 2570 aaPredicted RBP11.04□□□□□ -0.64
PCDH8-201ENST00000338862 BEX4Q9NWD9 120 aaPredicted RBP11.04□□□□□ -0.64
PCDH8-201ENST00000338862 BOD1L2Q8IYS8 172 aa11.03□□□□□ -0.64
PCDH8-201ENST00000338862 METTL26Q96S19 204 aa11.03□□□□□ -0.64
PCDH8-201ENST00000338862 RNASE4P34096 147 aaKnown RBP11.03□□□□□ -0.64
PCDH8-201ENST00000338862 VMO1Q7Z5L0 202 aa11.03□□□□□ -0.64
PCDH8-201ENST00000338862 LINC00574Q9H8X3 128 aa11.03□□□□□ -0.64
PCDH8-201ENST00000338862 NXT2Q9NPJ8 142 aaKnown RBP11.03□□□□□ -0.64
PCDH8-201ENST00000338862 A0A096LNJ9 63 aa11.02□□□□□ -0.64
PCDH8-201ENST00000338862 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.64
PCDH8-201ENST00000338862 RAXQ9Y2V3 346 aa11.02□□□□□ -0.64
PCDH8-201ENST00000338862 C16orf54Q6UWD8 224 aa11.02□□□□□ -0.65
PCDH8-201ENST00000338862 POLQO75417 2590 aa11.02□□□□□ -0.65
PCDH8-201ENST00000338862 AZU1P20160 251 aa11.02□□□□□ -0.65
PCDH8-201ENST00000338862 OR5A1Q8NGJ0 315 aa11.01□□□□□ -0.65
PCDH8-201ENST00000338862 NPFFR1Q9GZQ6 430 aa11.01□□□□□ -0.65
PCDH8-201ENST00000338862 NOTCH2Q04721 2471 aa11.01□□□□□ -0.65
PCDH8-201ENST00000338862 F6UB75 175 aa11.01□□□□□ -0.65
PCDH8-201ENST00000338862 LAGE3Q14657 143 aa11.01□□□□□ -0.65
PCDH8-201ENST00000338862 MRGPRG-AS1Q2M3A8 158 aa11.01□□□□□ -0.65
PCDH8-201ENST00000338862 CCDC144NLQ6NUI1 221 aa11.01□□□□□ -0.65
PCDH8-201ENST00000338862 LYPD1Q8N2G4 141 aa11.01□□□□□ -0.65
PCDH8-201ENST00000338862 SIGMAR1Q99720 223 aa11.01□□□□□ -0.65
PCDH8-201ENST00000338862 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
PCDH8-201ENST00000338862 ZNF256Q9Y2P7 627 aaPredicted RBP11□□□□□ -0.65
PCDH8-201ENST00000338862 ZNF815PA8K554 130 aa11□□□□□ -0.65
PCDH8-201ENST00000338862 ATP5LO75964 103 aa11□□□□□ -0.65
PCDH8-201ENST00000338862 PPBPP02775 128 aa11□□□□□ -0.65
PCDH8-201ENST00000338862 PF4V1P10720 104 aa11□□□□□ -0.65
PCDH8-201ENST00000338862 TNFRSF14Q92956 283 aa11□□□□□ -0.65
PCDH8-201ENST00000338862 AGPAT4-IT1Q9H0P7 198 aa11□□□□□ -0.65
PCDH8-201ENST00000338862 ZFYVE26Q68DK2 2539 aa11□□□□□ -0.65
PCDH8-201ENST00000338862 GAGE13Q4V321 117 aa11□□□□□ -0.65
PCDH8-201ENST00000338862 ATP6V0E1O15342 81 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 ATP5G2Q06055 141 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 BRD3OSQ6XYD6 125 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 PGPEP1Q9NXJ5 209 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 HIVEP3Q5T1R4 2406 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 INS-IGF2F8WCM5 200 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 CTSGP08311 255 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 ZNF562Q6V9R5 426 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
PCDH8-201ENST00000338862 LINC01548A6NM66 108 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 IGF1P05019 195 aa10.99□□□□□ -0.65
PCDH8-201ENST00000338862 FGF6P10767 208 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms