RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 KLK9Q9UKQ9 250 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 PDCD11Q14690 1871 aaKnown RBP10.41□□□□□ -0.74
HLCS-201ENST00000336648 A0A1B0GUS0 222 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 NDUFB1O75438 58 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 MRPL35Q9NZE8 188 aaKnown RBP10.41□□□□□ -0.74
HLCS-201ENST00000336648 ALPK2Q86TB3 2170 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 FAM236AA0A1B0GUQ0 79 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 FAM236BA0A1B0GV22 79 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 H3BQ85 93 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 C22orf46C9J442 243 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 HERV-K104P63124 156 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 RUSC1-AS1Q66K80 236 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 VOPP1Q96AW1 172 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 TRAV12-2A0A075B6T6 113 aa10.4□□□□□ -0.74
HLCS-201ENST00000336648 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
HLCS-201ENST00000336648 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
HLCS-201ENST00000336648 FOXI2Q6ZQN5 318 aa10.4□□□□□ -0.74
HLCS-201ENST00000336648 KAAG1Q9UBP8 84 aa10.4□□□□□ -0.74
HLCS-201ENST00000336648 NYNRINQ9P2P1 1898 aaKnown RBP10.4□□□□□ -0.74
HLCS-201ENST00000336648 SBF2Q86WG5 1849 aa10.4□□□□□ -0.74
HLCS-201ENST00000336648 WIPF2Q8TF74 440 aaPredicted RBP10.4□□□□□ -0.75
HLCS-201ENST00000336648 CFHR4Q92496 578 aa10.4□□□□□ -0.75
HLCS-201ENST00000336648 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
HLCS-201ENST00000336648 IGLC7A0M8Q6 106 aa10.39□□□□□ -0.75
HLCS-201ENST00000336648 CGB3P0DN86 165 aa10.39□□□□□ -0.75
HLCS-201ENST00000336648 SPTSSBQ8NFR3 76 aa10.39□□□□□ -0.75
HLCS-201ENST00000336648 CCL25O15444 150 aa10.39□□□□□ -0.75
HLCS-201ENST00000336648 PROP1O75360 226 aa10.39□□□□□ -0.75
HLCS-201ENST00000336648 IGLV1-44P01699 117 aa10.39□□□□□ -0.75
HLCS-201ENST00000336648 RNF152Q8N8N0 203 aa10.39□□□□□ -0.75
HLCS-201ENST00000336648 CYYR1Q96J86 154 aa10.39□□□□□ -0.75
HLCS-201ENST00000336648 TEX48A0A1B0GUV7 120 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 C9JQL5 133 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 IGLC1P0CG04 106 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 MRPL23Q16540 153 aaKnown RBP10.38□□□□□ -0.75
HLCS-201ENST00000336648 C1orf147Q96MC9 270 aaPredicted RBP10.38□□□□□ -0.75
HLCS-201ENST00000336648 IGLV3-9A0A075B6K5 115 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 IGHV3-16A0A0C4DH30 117 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 C15orf65H3BRN8 121 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 FREM3P0C091 2139 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 DOCK6Q96HP0 2047 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 LTAP01374 205 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 ZNF726P1Q15940 193 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 FXYD5Q96DB9 178 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 CACNA1DQ01668 2161 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 IGFBPL1Q8WX77 278 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 G3V318 75 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 CGB7P0DN87 165 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 V9GYY9 64 aa10.38□□□□□ -0.75
HLCS-201ENST00000336648 IGKV3D-7A0A0C4DH55 119 aa10.37□□□□□ -0.75
HLCS-201ENST00000336648 PRSS47A8MTI9 375 aa10.37□□□□□ -0.75
HLCS-201ENST00000336648 WT1-ASQ06250 92 aa10.37□□□□□ -0.75
HLCS-201ENST00000336648 DUX4L9Q6RFH8 374 aaPredicted RBP10.37□□□□□ -0.75
HLCS-201ENST00000336648 Q6ZR03 302 aa10.37□□□□□ -0.75
HLCS-201ENST00000336648 TRAV26-2A0A0B4J265 109 aa10.37□□□□□ -0.75
HLCS-201ENST00000336648 ZC2HC1AQ96GY0 325 aa10.37□□□□□ -0.75
HLCS-201ENST00000336648 U3KQE9 123 aa10.37□□□□□ -0.75
HLCS-201ENST00000336648 IGKV1-39P01597 117 aa10.37□□□□□ -0.75
HLCS-201ENST00000336648 IGKV1D-39P04432 117 aa10.37□□□□□ -0.75
HLCS-201ENST00000336648 ABCA7Q8IZY2 2146 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 LCTP09848 1927 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 RTTNQ86VV8 2226 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 IGHV2-5P01817 119 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 LY6HO94772 140 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 CFHR3Q02985 330 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 CR1LQ2VPA4 569 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 SH2D6Q7Z4S9 175 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 INTS1Q8N201 2190 aaKnown RBP10.36□□□□□ -0.75
HLCS-201ENST00000336648 UBE2BP63146 152 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 PRR20EP86478 221 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 PRR20CP86479 221 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 PRR20DP86480 221 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 PRR20BP86481 221 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 PRR20AP86496 221 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 VSIG2Q96IQ7 327 aa10.36□□□□□ -0.75
HLCS-201ENST00000336648 IL15RAQ13261 267 aa10.35□□□□□ -0.75
HLCS-201ENST00000336648 NDUFS7O75251 213 aa10.35□□□□□ -0.75
HLCS-201ENST00000336648 CEP290O15078 2479 aa10.35□□□□□ -0.75
HLCS-201ENST00000336648 SLC25A29Q8N8R3 303 aa10.35□□□□□ -0.75
HLCS-201ENST00000336648 NREPQ16612 68 aa10.35□□□□□ -0.75
HLCS-201ENST00000336648 IGHV3-38A0A0C4DH36 116 aa10.35□□□□□ -0.75
HLCS-201ENST00000336648 ANGP03950 147 aaKnown RBP10.35□□□□□ -0.75
HLCS-201ENST00000336648 H0YGX0 51 aa10.34□□□□□ -0.75
HLCS-201ENST00000336648 IGHV4-28A0A0C4DH34 117 aa10.34□□□□□ -0.75
HLCS-201ENST00000336648 ZFP2Q6ZN57 461 aa10.34□□□□□ -0.75
HLCS-201ENST00000336648 Q6ZVH6 145 aa10.34□□□□□ -0.75
HLCS-201ENST00000336648 DEFB125Q8N687 156 aa10.34□□□□□ -0.75
HLCS-201ENST00000336648 LRRK1Q38SD2 2015 aa10.34□□□□□ -0.75
HLCS-201ENST00000336648 GREB1Q4ZG55 1949 aa10.34□□□□□ -0.75
HLCS-201ENST00000336648 Q96MF0 132 aa10.34□□□□□ -0.75
HLCS-201ENST00000336648 ZNF491Q8N8L2 437 aa10.34□□□□□ -0.75
HLCS-201ENST00000336648 DYNAPQ8N1N2 210 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 WIPF3A6NGB9 483 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 IGLL5B9A064 214 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 WDR86Q86TI4 376 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 ZNRD1Q9P1U0 126 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 SIPA1L1O43166 1804 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 ATP5G1P05496 136 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 EP300Q09472 2414 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms