RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 DAZ4Q86SG3 579 aaKnown RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 DAZ3Q9NR90 486 aaKnown RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 IGKV3D-20A0A0C4DH25 116 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 A6NDX4 124 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 KNCNA6PVL3 124 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 IGLV3-1P01715 115 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 LINC00614P0C842 121 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 ZNF25P17030 456 aaPredicted RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 LYZL1Q6UWQ5 148 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 BOD1L2Q8IYS8 172 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 CREBBPQ92793 2442 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 PLCE1Q9P212 2302 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 TRBV19A0A075B6N1 114 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 VWC2LB2RUY7 222 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 NDUFS6O75380 124 aaKnown RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 IGHV4-38-2P0DP08 117 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 C5orf56Q8N8D9 126 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 C11orf45Q8TAV5 145 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 PIEZO2Q9H5I5 2752 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 NDUFA7O95182 113 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 ANGP03950 147 aaKnown RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 CITED2Q99967 270 aaPredicted RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 DERL1Q9BUN8 251 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 LAMTOR3Q9UHA4 124 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 LYRM9A8MSI8 78 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 H0YIZ8 118 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 IGHG2P01859 326 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 LINC00518Q8N0U6 118 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 RPP25LQ8N5L8 163 aaKnown RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 NUP210LQ5VU65 1888 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 C15orf65H3BRN8 121 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 K7ERU9 68 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 Q5BKY6 102 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 DUX4L9Q6RFH8 374 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-201ENST00000336596 ODF3L1Q8IXM7 274 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 AGMATQ9BSE5 352 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 IGKV1OR2-108A0A075B7D4 117 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 LY6G6DO95868 133 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 CXCL5P42830 114 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 PRIMA1Q86XR5 153 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 K7EQD1 137 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 IGKV1-5P01602 117 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 EXOC3-AS1Q8N2X6 119 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 SIRPDQ9H106 197 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 TMEM242Q9NWH2 141 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 IL15RAQ13261 267 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 C1orf147Q96MC9 270 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-201ENST00000336596 ARMS2P0C7Q2 107 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 ADMP35318 185 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 ZNRF2Q8NHG8 242 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 IFI27L1Q96BM0 104 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 SMIM2Q9BVW6 85 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 PAM16Q9Y3D7 125 aa5.79□□□□□ -1.48
EPHA3-201ENST00000336596 LGALS9O00182 355 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 RPL23P62829 140 aaKnown RBP5.78□□□□□ -1.48
EPHA3-201ENST00000336596 MEGF9Q9H1U4 602 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 PCNX3Q9H6A9 2034 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 EML6Q6ZMW3 1958 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 COL5A1P20908 1838 aaPredicted RBP5.78□□□□□ -1.48
EPHA3-201ENST00000336596 PTPN13Q12923 2485 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 TRAV13-1A0A0B4J241 112 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 TRAV3A0A0B4J244 114 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 C14orf178Q8N769 122 aaPredicted RBP5.78□□□□□ -1.48
EPHA3-201ENST00000336596 ATP6V0E2Q8NHE4 81 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 C20orf78Q9BR46 151 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 CARHSP1Q9Y2V2 147 aaKnown RBP5.78□□□□□ -1.48
EPHA3-201ENST00000336596 CBLN1P23435 193 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 SPANXDQ9BXN6 97 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 ERG28Q9UKR5 140 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 INAFM1C9JVW0 142 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.78□□□□□ -1.48
EPHA3-201ENST00000336596 FOXA3P55318 350 aaPredicted RBP5.78□□□□□ -1.48
EPHA3-201ENST00000336596 LYPD6Q86Y78 171 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 GATD1Q8NB37 220 aa5.78□□□□□ -1.48
EPHA3-201ENST00000336596 TNRC6AQ8NDV7 1962 aaKnown RBP5.78□□□□□ -1.48
EPHA3-201ENST00000336596 NUPR2A6NF83 97 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 HERV-K104P63124 156 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 LINC00479Q96M42 142 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 NDUFA12Q9UI09 145 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 TRAV10A0A0B4J240 114 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 PRSS29PA6NIE9 313 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 IGKV1-16P04430 117 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 GAGE6Q13070 117 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 PMVKQ15126 192 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 KRTAP27-1Q3LI81 207 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 NOP10Q9NPE3 64 aaKnown RBP5.77□□□□□ -1.49
EPHA3-201ENST00000336596 MED12LQ86YW9 2145 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 SLURP1P55000 103 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 CFHR3Q02985 330 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 SPANXA1Q9NS26 97 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 SIGLEC8Q9NYZ4 499 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 TLN1Q9Y490 2541 aaKnown RBP5.77□□□□□ -1.49
EPHA3-201ENST00000336596 C9JQL5 133 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 MED14OSP0DP75 135 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 BCL6BQ8N143 479 aaPredicted RBP5.77□□□□□ -1.49
EPHA3-201ENST00000336596 KLK9Q9UKQ9 250 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 SPTBN4Q9H254 2564 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 ABCA1O95477 2261 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 A0A087X0M5 115 aa5.77□□□□□ -1.49
EPHA3-201ENST00000336596 A0A1B0GX30 115 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms