RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 A6NDX4 124 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 IGF1P05019 195 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 LCN12Q6JVE5 192 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 C19orf71A6NCJ1 209 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 F6UB75 175 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 KRTDAPP60985 99 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 LINC01356Q8N9X3 169 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 RNASEKQ6P5S7 137 aaKnown RBP9.67□□□□□ -0.86
LIMK1-201ENST00000336180 Q6ZWC4 215 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 OR4X2Q8NGF9 303 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 VN1R17PQ8TDU5 208 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 GNB1LQ9BYB4 327 aa9.67□□□□□ -0.86
LIMK1-201ENST00000336180 AMTP48728 403 aa9.66□□□□□ -0.86
LIMK1-201ENST00000336180 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.66□□□□□ -0.86
LIMK1-201ENST00000336180 WFDC11Q8NEX6 87 aa9.66□□□□□ -0.86
LIMK1-201ENST00000336180 DPF1Q92782 380 aa9.66□□□□□ -0.86
LIMK1-201ENST00000336180 TMEM213A2RRL7 107 aa9.66□□□□□ -0.86
LIMK1-201ENST00000336180 SH2D1AO60880 128 aa9.66□□□□□ -0.86
LIMK1-201ENST00000336180 ATOH7Q8N100 152 aa9.66□□□□□ -0.86
LIMK1-201ENST00000336180 C11orf44Q8N8P7 122 aa9.66□□□□□ -0.86
LIMK1-201ENST00000336180 METTL26Q96S19 204 aa9.66□□□□□ -0.86
LIMK1-201ENST00000336180 MCRIP2Q9BUT9 160 aaKnown RBP9.66□□□□□ -0.86
LIMK1-201ENST00000336180 GAGE12BA1L429 117 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 A8MWL6 223 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 K7EQM0 130 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 FXYD7P58549 80 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 NIT1Q86X76 327 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 DUX3Q96PT4 197 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 ORM1P02763 201 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 FAM231DQ6ZW35 169 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 LAMTOR2Q9Y2Q5 125 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 TNFRSF18Q9Y5U5 241 aa9.65□□□□□ -0.86
LIMK1-201ENST00000336180 A0A096LNT2 108 aa9.65□□□□□ -0.87
LIMK1-201ENST00000336180 H0Y8G0 127 aa9.65□□□□□ -0.87
LIMK1-201ENST00000336180 CT45A10P0DMU9 189 aa9.65□□□□□ -0.87
LIMK1-201ENST00000336180 WIPF2Q8TF74 440 aaPredicted RBP9.65□□□□□ -0.87
LIMK1-201ENST00000336180 PRSS22Q9GZN4 317 aa9.65□□□□□ -0.87
LIMK1-201ENST00000336180 HOXA3O43365 443 aaPredicted RBP9.64□□□□□ -0.87
LIMK1-201ENST00000336180 IGHV4-31P0DP07 118 aa9.64□□□□□ -0.87
LIMK1-201ENST00000336180 GATA3P23771 443 aa9.64□□□□□ -0.87
LIMK1-201ENST00000336180 COA6Q5JTJ3 125 aaKnown RBP9.64□□□□□ -0.87
LIMK1-201ENST00000336180 KIR3DS1Q14943 382 aa9.64□□□□□ -0.87
LIMK1-201ENST00000336180 C8orf86Q6ZUL3 223 aa9.64□□□□□ -0.87
LIMK1-201ENST00000336180 C16orf92Q96LL3 132 aa9.64□□□□□ -0.87
LIMK1-201ENST00000336180 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
LIMK1-201ENST00000336180 FAM181BA6NEQ2 426 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 SMKR1H3BMG3 65 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 C18orf32Q8TCD1 76 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 C20orf173Q96LM9 149 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 A0A1W2PS18 150 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 SCGB2A1O75556 95 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 IGHG2P01859 326 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 HLA-DQA1P01909 254 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 HBBP68871 147 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 DEFB113Q30KQ7 82 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 C18orf65Q6ZTR6 163 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 PRR25Q96S07 402 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 TRBV7-1A0A0A6YYK4 115 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 TRAV8-2A0A0B4J237 113 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 LOC389332A0A1B0GUA5 103 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 IGKV3-20P01619 116 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 LYZL1Q6UWQ5 148 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 UNC79Q9P2D8 2635 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 CR1P17927 2039 aa9.63□□□□□ -0.87
LIMK1-201ENST00000336180 SLC25A16P16260 332 aa9.62□□□□□ -0.87
LIMK1-201ENST00000336180 KHDC1LQ5JSQ8 128 aa9.62□□□□□ -0.87
LIMK1-201ENST00000336180 RBPMS2Q6ZRY4 209 aaKnown RBP9.62□□□□□ -0.87
LIMK1-201ENST00000336180 SMIM20Q8N5G0 67 aa9.62□□□□□ -0.87
LIMK1-201ENST00000336180 FAM110AQ9BQ89 295 aa9.62□□□□□ -0.87
LIMK1-201ENST00000336180 VAMP8Q9BV40 100 aa9.62□□□□□ -0.87
LIMK1-201ENST00000336180 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
LIMK1-201ENST00000336180 FOXE3Q13461 319 aa9.62□□□□□ -0.87
LIMK1-201ENST00000336180 SIGLECL1Q8N7X8 197 aa9.62□□□□□ -0.87
LIMK1-201ENST00000336180 PSG9Q00887 426 aa9.61□□□□□ -0.87
LIMK1-201ENST00000336180 C19orf54Q5BKX5 351 aa9.61□□□□□ -0.87
LIMK1-201ENST00000336180 AGPAT4-IT1Q9H0P7 198 aa9.61□□□□□ -0.87
LIMK1-201ENST00000336180 YAE1D1Q9NRH1 226 aa9.61□□□□□ -0.87
LIMK1-201ENST00000336180 G3V4G9 280 aa9.61□□□□□ -0.87
LIMK1-201ENST00000336180 NCR2O95944 276 aa9.61□□□□□ -0.87
LIMK1-201ENST00000336180 Q6ZN92 141 aa9.61□□□□□ -0.87
LIMK1-201ENST00000336180 LINC00173Q6ZV60 143 aa9.61□□□□□ -0.87
LIMK1-201ENST00000336180 AGRNO00468 2067 aa9.61□□□□□ -0.87
LIMK1-201ENST00000336180 GEMIN7Q9H840 131 aaKnown RBP9.61□□□□□ -0.87
LIMK1-201ENST00000336180 TRAV9-1A0A075B6T8 112 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 A0A1B0GXF2 115 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 HNRNPA3P51991 378 aaKnown RBP9.6□□□□□ -0.87
LIMK1-201ENST00000336180 NRN1Q9NPD7 142 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 ZNF492Q9P255 531 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 GAS8-AS1O95177 125 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 AMMECR1LQ6DCA0 310 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 AMN1Q8IY45 258 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 DEFB104AQ8WTQ1 72 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 C11orf21Q9P2W6 132 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 MT-ND6P03923 174 aa9.6□□□□□ -0.87
LIMK1-201ENST00000336180 M0QXV9 152 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 SNAI2O43623 268 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 HSBP1O75506 76 aa9.59□□□□□ -0.87
LIMK1-201ENST00000336180 PDE6HQ13956 83 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms