RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 KLF12Q9Y4X4 402 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 S100A9P06702 114 aaKnown RBP10.22□□□□□ -0.77
APOBEC3B-202ENST00000335760 RBMY1A1P0DJD3 496 aaKnown RBP10.22□□□□□ -0.77
APOBEC3B-202ENST00000335760 RBMY1CP0DJD4 496 aa10.22□□□□□ -0.77
APOBEC3B-202ENST00000335760 RBMY1FQ15415 496 aaKnown RBP10.22□□□□□ -0.77
APOBEC3B-202ENST00000335760 TMEM183BQ1AE95 376 aa10.22□□□□□ -0.77
APOBEC3B-202ENST00000335760 Q86TA4 180 aa10.22□□□□□ -0.77
APOBEC3B-202ENST00000335760 TRBV6-1A0A0K0K1D8 114 aa10.21□□□□□ -0.78
APOBEC3B-202ENST00000335760 SAPCD1Q5SSQ6 148 aa10.21□□□□□ -0.78
APOBEC3B-202ENST00000335760 ZNF705AQ6ZN79 300 aaPredicted RBP10.21□□□□□ -0.78
APOBEC3B-202ENST00000335760 C8orf49Q96NF6 230 aa10.21□□□□□ -0.78
APOBEC3B-202ENST00000335760 LINC01587Q99440 93 aa10.21□□□□□ -0.78
APOBEC3B-202ENST00000335760 C20orf144Q9BQM9 153 aa10.21□□□□□ -0.78
APOBEC3B-202ENST00000335760 NIPSNAP3BQ9BS92 247 aa10.21□□□□□ -0.78
APOBEC3B-202ENST00000335760 MED9Q9NWA0 146 aa10.21□□□□□ -0.78
APOBEC3B-202ENST00000335760 RPL35P42766 123 aaKnown RBP10.2□□□□□ -0.78
APOBEC3B-202ENST00000335760 CLLU1Q5K131 121 aa10.2□□□□□ -0.78
APOBEC3B-202ENST00000335760 TMEM256Q8N2U0 113 aa10.2□□□□□ -0.78
APOBEC3B-202ENST00000335760 DERL1Q9BUN8 251 aa10.2□□□□□ -0.78
APOBEC3B-202ENST00000335760 ZFP30Q9Y2G7 519 aa10.2□□□□□ -0.78
APOBEC3B-202ENST00000335760 U3KQK5 164 aa10.2□□□□□ -0.78
APOBEC3B-202ENST00000335760 X6R8D5 127 aa10.2□□□□□ -0.78
APOBEC3B-202ENST00000335760 NBEAL2Q6ZNJ1 2754 aa10.2□□□□□ -0.78
APOBEC3B-202ENST00000335760 ZNF324O75467 553 aaPredicted RBP10.19□□□□□ -0.78
APOBEC3B-202ENST00000335760 SMUG1Q53HV7 270 aa10.19□□□□□ -0.78
APOBEC3B-202ENST00000335760 Q6ZQT7 251 aa10.19□□□□□ -0.78
APOBEC3B-202ENST00000335760 ZNF705GA8MUZ8 300 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3B-202ENST00000335760 H7BYZ3 331 aa10.18□□□□□ -0.78
APOBEC3B-202ENST00000335760 LTAP01374 205 aa10.18□□□□□ -0.78
APOBEC3B-202ENST00000335760 PRM2P04554 102 aa10.18□□□□□ -0.78
APOBEC3B-202ENST00000335760 MIFP14174 115 aa10.18□□□□□ -0.78
APOBEC3B-202ENST00000335760 HTN1P15515 57 aa10.18□□□□□ -0.78
APOBEC3B-202ENST00000335760 TAS2R60P59551 318 aa10.18□□□□□ -0.78
APOBEC3B-202ENST00000335760 BAGE2Q86Y30 109 aa10.18□□□□□ -0.78
APOBEC3B-202ENST00000335760 NEU1Q99519 415 aa10.18□□□□□ -0.78
APOBEC3B-202ENST00000335760 RAB19A4D1S5 217 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 SMIM9A6NGZ8 99 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 TMEM250H0YL14 139 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 GCGP01275 180 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 ZNF80P51504 273 aaPredicted RBP10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 CEBPGP53567 150 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 PEA15Q15121 130 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 RRN3P1Q2M238 152 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 Q6AWC8 147 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 Q8NAQ8 132 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 NHLRC2Q8NBF2 726 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 COL7A1Q02388 2944 aa10.17□□□□□ -0.78
APOBEC3B-202ENST00000335760 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 IGHV4-28A0A0C4DH34 117 aa10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 RGS13O14921 159 aa10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 DEFB4AO15263 64 aa10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 NDUFS6O75380 124 aaKnown RBP10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 SRP19P09132 144 aaKnown RBP10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 SRSF3P84103 164 aaKnown RBP10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 CENPWQ5EE01 88 aa10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 TMEM183AQ8IXX5 376 aa10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 PYGO2Q9BRQ0 406 aa10.16□□□□□ -0.78
APOBEC3B-202ENST00000335760 A0A0J9YWU9 116 aa10.15□□□□□ -0.78
APOBEC3B-202ENST00000335760 AZU1P20160 251 aa10.15□□□□□ -0.78
APOBEC3B-202ENST00000335760 GNG4P50150 75 aa10.15□□□□□ -0.78
APOBEC3B-202ENST00000335760 ZNF674Q2M3X9 581 aa10.15□□□□□ -0.78
APOBEC3B-202ENST00000335760 MUC21Q5SSG8 566 aa10.15□□□□□ -0.78
APOBEC3B-202ENST00000335760 PARLQ9H300 379 aa10.15□□□□□ -0.78
APOBEC3B-202ENST00000335760 NAGKQ9UJ70 344 aa10.15□□□□□ -0.78
APOBEC3B-202ENST00000335760 IGHV1OR15-1A0A075B7D0 117 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 CBY3A6NI87 242 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 C9JQL5 133 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 PFN1P07737 140 aaKnown RBP10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 COX8CQ7Z4L0 72 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 EIF4E3Q8N5X7 224 aaKnown RBP10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 LINC00467Q9BRT7 94 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 MLST8Q9BVC4 326 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 TENM3Q9P273 2699 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 TRBV20OR9-2A0A075B6H5 130 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 FABP5P3A8MUU1 101 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 CRIP1P50238 77 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 EMP1P54849 157 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 SMDT1Q9H4I9 107 aa10.14□□□□□ -0.79
APOBEC3B-202ENST00000335760 PGPEP1LA6NFU8 196 aa10.13□□□□□ -0.79
APOBEC3B-202ENST00000335760 SH2D1AO60880 128 aa10.13□□□□□ -0.79
APOBEC3B-202ENST00000335760 IGLV2-8P01709 118 aa10.13□□□□□ -0.79
APOBEC3B-202ENST00000335760 MGST1P10620 155 aaKnown RBP10.13□□□□□ -0.79
APOBEC3B-202ENST00000335760 ANXA2RQ3ZCQ2 193 aa10.13□□□□□ -0.79
APOBEC3B-202ENST00000335760 FAM162BQ5T6X4 162 aa10.13□□□□□ -0.79
APOBEC3B-202ENST00000335760 C16orf74Q96GX8 76 aa10.13□□□□□ -0.79
APOBEC3B-202ENST00000335760 C11orf68Q9H3H3 251 aaKnown RBP10.13□□□□□ -0.79
APOBEC3B-202ENST00000335760 TP53TG3Q9ULZ0 132 aa10.13□□□□□ -0.79
APOBEC3B-202ENST00000335760 TMEM189A5PLL7 270 aa10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 C9JCJ5 164 aa10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 PRR27Q6MZM9 219 aa10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 ZNF493Q6ZR52 646 aa10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 RNASE8Q8TDE3 154 aaKnown RBP10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 TMEM263Q8WUH6 116 aaKnown RBP10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 SMIM12Q96EX1 92 aa10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 EDA2RQ9HAV5 297 aa10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 C11orf21Q9P2W6 132 aa10.12□□□□□ -0.79
APOBEC3B-202ENST00000335760 ZNF727A8MUV8 499 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms