RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 OR2K2Q8NGT1 345 aa11.79□□□□□ -0.52
C9orf47-201ENST00000334490 AJUBAQ96IF1 538 aa11.79□□□□□ -0.52
C9orf47-201ENST00000334490 ATP6V0BQ99437 205 aa11.79□□□□□ -0.52
C9orf47-201ENST00000334490 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
C9orf47-201ENST00000334490 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
C9orf47-201ENST00000334490 FXYD5Q96DB9 178 aa11.79□□□□□ -0.52
C9orf47-201ENST00000334490 GFRA4Q9GZZ7 299 aa11.79□□□□□ -0.52
C9orf47-201ENST00000334490 F6UB75 175 aa11.79□□□□□ -0.52
C9orf47-201ENST00000334490 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
C9orf47-201ENST00000334490 ZNF815PA8K554 130 aa11.78□□□□□ -0.52
C9orf47-201ENST00000334490 LMO4P61968 165 aa11.78□□□□□ -0.52
C9orf47-201ENST00000334490 HLA-DMBP28068 263 aa11.78□□□□□ -0.52
C9orf47-201ENST00000334490 TMEM158Q8WZ71 300 aa11.78□□□□□ -0.52
C9orf47-201ENST00000334490 C17orf77Q96MU5 243 aa11.78□□□□□ -0.52
C9orf47-201ENST00000334490 NCKAP5O14513 1909 aa11.78□□□□□ -0.52
C9orf47-201ENST00000334490 ZNF106Q9H2Y7 1883 aaKnown RBP11.78□□□□□ -0.52
C9orf47-201ENST00000334490 K7EIM0 57 aa11.78□□□□□ -0.52
C9orf47-201ENST00000334490 LINC00158P58513 81 aa11.78□□□□□ -0.52
C9orf47-201ENST00000334490 TRPT1Q86TN4 253 aaKnown RBP11.78□□□□□ -0.52
C9orf47-201ENST00000334490 BCL6BQ8N143 479 aaPredicted RBP11.78□□□□□ -0.52
C9orf47-201ENST00000334490 TRAV9-2A0A087WT02 112 aa11.77□□□□□ -0.52
C9orf47-201ENST00000334490 RBMY1BA6NDE4 496 aaKnown RBP11.77□□□□□ -0.52
C9orf47-201ENST00000334490 RBMY1EA6NEQ0 496 aaKnown RBP11.77□□□□□ -0.52
C9orf47-201ENST00000334490 RBMY1DP0C7P1 496 aaKnown RBP11.77□□□□□ -0.52
C9orf47-201ENST00000334490 RBMY1A1P0DJD3 496 aaKnown RBP11.77□□□□□ -0.52
C9orf47-201ENST00000334490 RBMY1CP0DJD4 496 aa11.77□□□□□ -0.52
C9orf47-201ENST00000334490 LOXL1Q08397 574 aaPredicted RBP11.77□□□□□ -0.52
C9orf47-201ENST00000334490 MRAPQ8TCY5 172 aa11.77□□□□□ -0.52
C9orf47-201ENST00000334490 IGLV11-55A0A075B6I3 123 aa11.77□□□□□ -0.52
C9orf47-201ENST00000334490 PLNP26678 52 aa11.77□□□□□ -0.52
C9orf47-201ENST00000334490 SEC11AP67812 179 aa11.77□□□□□ -0.52
C9orf47-201ENST00000334490 A8MWV9 139 aa11.77□□□□□ -0.53
C9orf47-201ENST00000334490 LINC01559Q495D7 138 aa11.77□□□□□ -0.53
C9orf47-201ENST00000334490 KIAA1549LQ6ZVL6 1849 aa11.77□□□□□ -0.53
C9orf47-201ENST00000334490 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.53
C9orf47-201ENST00000334490 HIST1H2BLQ99880 126 aa11.77□□□□□ -0.53
C9orf47-201ENST00000334490 TNFRSF6BO95407 300 aa11.76□□□□□ -0.53
C9orf47-201ENST00000334490 TMEM256Q8N2U0 113 aa11.76□□□□□ -0.53
C9orf47-201ENST00000334490 FAM231BA6NCW3 169 aa11.76□□□□□ -0.53
C9orf47-201ENST00000334490 TMEM86BQ8N661 226 aa11.76□□□□□ -0.53
C9orf47-201ENST00000334490 CHD3Q12873 2000 aaKnown RBP11.76□□□□□ -0.53
C9orf47-201ENST00000334490 I3L2K1 104 aa11.76□□□□□ -0.53
C9orf47-201ENST00000334490 IGKV1-17P01599 117 aa11.76□□□□□ -0.53
C9orf47-201ENST00000334490 ADCYAP1P18509 176 aa11.76□□□□□ -0.53
C9orf47-201ENST00000334490 MORN3Q6PF18 240 aaPredicted RBP11.75□□□□□ -0.53
C9orf47-201ENST00000334490 FOXI2Q6ZQN5 318 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 CT83Q5H943 113 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 C6orf226Q5I0X4 101 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 WFDC11Q8NEX6 87 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 PRSS46E5RG02 174 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 CTSGP08311 255 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 HIST2H2BCQ6DN03 193 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 K7ERU9 68 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 PLP1P60201 277 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 C9orf66Q5T8R8 295 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 LAMTOR2Q9Y2Q5 125 aa11.75□□□□□ -0.53
C9orf47-201ENST00000334490 FASNP49327 2511 aaKnown RBP11.74□□□□□ -0.53
C9orf47-201ENST00000334490 SPAG8Q99932 426 aaPredicted RBP11.74□□□□□ -0.53
C9orf47-201ENST00000334490 CBY1Q9Y3M2 126 aa11.74□□□□□ -0.53
C9orf47-201ENST00000334490 PRRC2AP48634 2157 aaKnown RBP11.74□□□□□ -0.53
C9orf47-201ENST00000334490 ZNF114Q8NC26 417 aa11.74□□□□□ -0.53
C9orf47-201ENST00000334490 AGPAT4-IT1Q9H0P7 198 aa11.74□□□□□ -0.53
C9orf47-201ENST00000334490 ZMAT4Q9H898 229 aa11.74□□□□□ -0.53
C9orf47-201ENST00000334490 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
C9orf47-201ENST00000334490 LRRC75A-AS1Q8N1F1 130 aa11.74□□□□□ -0.53
C9orf47-201ENST00000334490 DMRTA1Q5VZB9 504 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 ZNRF2Q8NHG8 242 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 ZC2HC1AQ96GY0 325 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 FAM104BQ5XKR9 115 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 DYNAPQ8N1N2 210 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 HIST3H2BBQ8N257 126 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 PTPRSQ13332 1948 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 GP9P14770 177 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 SS18Q15532 418 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 APRG1Q8IVJ8 170 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 ODF3L1Q8IXM7 274 aa11.73□□□□□ -0.53
C9orf47-201ENST00000334490 NACAE9PAV3 2078 aa11.72□□□□□ -0.53
C9orf47-201ENST00000334490 IGHG2P01859 326 aa11.72□□□□□ -0.53
C9orf47-201ENST00000334490 SFTA2Q6UW10 78 aa11.72□□□□□ -0.53
C9orf47-201ENST00000334490 RASL10AQ92737 203 aa11.72□□□□□ -0.53
C9orf47-201ENST00000334490 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
C9orf47-201ENST00000334490 ZNF462Q96JM2 2506 aa11.72□□□□□ -0.53
C9orf47-201ENST00000334490 IGHV4OR15-8A0A075B7B6 117 aa11.72□□□□□ -0.53
C9orf47-201ENST00000334490 A0A087WW49 117 aa11.72□□□□□ -0.53
C9orf47-201ENST00000334490 CLPSL1A2RUU4 121 aa11.71□□□□□ -0.53
C9orf47-201ENST00000334490 MUC22E2RYF6 1773 aaPredicted RBP11.71□□□□□ -0.53
C9orf47-201ENST00000334490 DOPEY1Q5JWR5 2465 aa11.71□□□□□ -0.53
C9orf47-201ENST00000334490 SLC25A20O43772 301 aa11.71□□□□□ -0.53
C9orf47-201ENST00000334490 IGLV2-23P01705 113 aa11.71□□□□□ -0.53
C9orf47-201ENST00000334490 LY6G5BQ8NDX9 201 aa11.71□□□□□ -0.53
C9orf47-201ENST00000334490 ABCA12Q86UK0 2595 aa11.71□□□□□ -0.54
C9orf47-201ENST00000334490 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.54
C9orf47-201ENST00000334490 SDHAF1A6NFY7 115 aa11.71□□□□□ -0.54
C9orf47-201ENST00000334490 FAM231DQ6ZW35 169 aa11.71□□□□□ -0.54
C9orf47-201ENST00000334490 C5orf30Q96GV9 206 aa11.71□□□□□ -0.54
C9orf47-201ENST00000334490 VWC2Q2TAL6 325 aa11.71□□□□□ -0.54
C9orf47-201ENST00000334490 PLEKHB2Q96CS7 222 aa11.71□□□□□ -0.54
C9orf47-201ENST00000334490 SPXQ9BT56 116 aa11.71□□□□□ -0.54
C9orf47-201ENST00000334490 C11orf52Q96A22 123 aa11.7□□□□□ -0.54
C9orf47-201ENST00000334490 GSN-AS1Q9NRJ2 163 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms