RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 RBMY1BA6NDE4 496 aaKnown RBP8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 RBMY1EA6NEQ0 496 aaKnown RBP8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 IGKV3-20P01619 116 aa8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 MT-ND4LP03901 98 aa8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 RBMY1DP0C7P1 496 aaKnown RBP8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 ERVFC1-1P60608 527 aa8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 IBA57Q5T440 356 aaKnown RBP8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 PRR9Q5T870 116 aa8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 FAM231DQ6ZW35 169 aa8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 OSTCQ9NRP0 149 aa8.93□□□□□ -0.98
TRIM49B-201ENST00000332682 KLLNB2CW77 178 aa8.92□□□□□ -0.98
TRIM49B-201ENST00000332682 OXLD1Q5BKU9 147 aa8.92□□□□□ -0.98
TRIM49B-201ENST00000332682 OR10G8Q8NGN5 311 aa8.92□□□□□ -0.98
TRIM49B-201ENST00000332682 H7BYZ3 331 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 PPP1R2P9O14990 202 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 KIR3DS1Q14943 382 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 FAM162BQ5T6X4 162 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 GTSCR1Q86UQ5 136 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 C15orf54Q8N8G6 183 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 NUDT10Q8NFP7 164 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 ANAPC16Q96DE5 110 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 NUDT11Q96G61 164 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 CLUHP3Q96NS8 147 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 CTDSP1Q9GZU7 261 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 TMEM242Q9NWH2 141 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 V9GYV3 84 aa8.91□□□□□ -0.98
TRIM49B-201ENST00000332682 J3KRW8 73 aa8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 M0R2Z0 102 aa8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 SH2D1AO60880 128 aa8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 PFN1P07737 140 aaKnown RBP8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 LEPP41159 167 aa8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 SPINK13Q1W4C9 94 aa8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 TMEM88Q6PEY1 159 aa8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 TRPT1Q86TN4 253 aaKnown RBP8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 CBLN2Q8IUK8 224 aa8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 STHQ8IWL8 128 aa8.9□□□□□ -0.98
TRIM49B-201ENST00000332682 ZNF705GA8MUZ8 300 aaPredicted RBP8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 P01737 135 aa8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 GPX1P07203 203 aa8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 TSPOP30536 169 aa8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 CDKN1BP46527 198 aa8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 EGFEM1PQ0D2K5 195 aa8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 BTN1A1Q13410 526 aa8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 Q6ZQT7 251 aa8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 DAZAP1Q96EP5 407 aaKnown RBP8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 RPP21Q9H633 154 aaKnown RBP8.9□□□□□ -0.99
TRIM49B-201ENST00000332682 CMYA5Q8N3K9 4069 aa8.89□□□□□ -0.99
TRIM49B-201ENST00000332682 FABP5P3A8MUU1 101 aa8.89□□□□□ -0.99
TRIM49B-201ENST00000332682 GATCO43716 136 aaKnown RBP8.89□□□□□ -0.99
TRIM49B-201ENST00000332682 CA1P00915 261 aaPredicted RBP8.89□□□□□ -0.99
TRIM49B-201ENST00000332682 GFI1BQ5VTD9 330 aa8.89□□□□□ -0.99
TRIM49B-201ENST00000332682 Q6AWC8 147 aa8.89□□□□□ -0.99
TRIM49B-201ENST00000332682 DEFB125Q8N687 156 aa8.89□□□□□ -0.99
TRIM49B-201ENST00000332682 TRAV12-2A0A075B6T6 113 aa8.88□□□□□ -0.99
TRIM49B-201ENST00000332682 C7orf71A4D174 169 aa8.88□□□□□ -0.99
TRIM49B-201ENST00000332682 RNASE4P34096 147 aaKnown RBP8.88□□□□□ -0.99
TRIM49B-201ENST00000332682 FXYD7P58549 80 aa8.88□□□□□ -0.99
TRIM49B-201ENST00000332682 RPL19P84098 196 aaKnown RBP8.88□□□□□ -0.99
TRIM49B-201ENST00000332682 CT83Q5H943 113 aa8.88□□□□□ -0.99
TRIM49B-201ENST00000332682 Q8N1Y9 231 aa8.88□□□□□ -0.99
TRIM49B-201ENST00000332682 SMCO4Q9NRQ5 59 aa8.88□□□□□ -0.99
TRIM49B-201ENST00000332682 C11orf21Q9P2W6 132 aa8.88□□□□□ -0.99
TRIM49B-201ENST00000332682 TRAV21A0A0B4J279 112 aa8.87□□□□□ -0.99
TRIM49B-201ENST00000332682 CXorf65A6NEN9 183 aa8.87□□□□□ -0.99
TRIM49B-201ENST00000332682 CRXO43186 299 aaPredicted RBP8.87□□□□□ -0.99
TRIM49B-201ENST00000332682 KRTAP10-11P60412 298 aa8.87□□□□□ -0.99
TRIM49B-201ENST00000332682 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
TRIM49B-201ENST00000332682 OR2D3Q8NGH3 330 aa8.87□□□□□ -0.99
TRIM49B-201ENST00000332682 IL36BQ9NZH7 164 aa8.87□□□□□ -0.99
TRIM49B-201ENST00000332682 G3V4G9 280 aa8.86□□□□□ -0.99
TRIM49B-201ENST00000332682 ZNF324O75467 553 aaPredicted RBP8.86□□□□□ -0.99
TRIM49B-201ENST00000332682 KRTAP21-3Q3LHN1 58 aa8.86□□□□□ -0.99
TRIM49B-201ENST00000332682 SAMD5Q5TGI4 173 aa8.86□□□□□ -0.99
TRIM49B-201ENST00000332682 IMMP2LQ96T52 175 aa8.86□□□□□ -0.99
TRIM49B-201ENST00000332682 TUBA4BQ9H853 241 aa8.86□□□□□ -0.99
TRIM49B-201ENST00000332682 URGCP-MRPS24S4R325 110 aa8.86□□□□□ -0.99
TRIM49B-201ENST00000332682 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 TMEM189A5PLL7 270 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 ORM1P02763 201 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 RBMY1A1P0DJD3 496 aaKnown RBP8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 RBMY1CP0DJD4 496 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 RPL35AP18077 110 aaKnown RBP8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 RBMY1FQ15415 496 aaKnown RBP8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 ZNF575Q86XF7 245 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 TSKUQ8WUA8 353 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 YPEL4Q96NS1 127 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 SRD5A3Q9H8P0 318 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 TMSB15BA0A087X1C1 80 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 SMIM27A0A1W2PRY6 76 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 A8MWL6 223 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 AMBPP02760 352 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 GIG44P09565 113 aaPredicted RBP8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 GZMBP10144 247 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 TCL1AP56279 114 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 NUTF2P61970 127 aaKnown RBP8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 ELOBQ15370 118 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 GTSF1Q8WW33 167 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 NEU1Q99519 415 aa8.85□□□□□ -0.99
TRIM49B-201ENST00000332682 NAGKQ9UJ70 344 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms