RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 TRAV34A0A0B4J273 112 aa15□□□□□ -0.01
YBX1-202ENST00000332220 TMEM189A5PLL7 270 aa15□□□□□ -0.01
YBX1-202ENST00000332220 C3orf84H3BNL1 204 aa15□□□□□ -0.01
YBX1-202ENST00000332220 PPT1P50897 306 aa15□□□□□ -0.01
YBX1-202ENST00000332220 FLI1Q01543 452 aaPredicted RBP15□□□□□ -0.01
YBX1-202ENST00000332220 PMS2P11Q13670 270 aa15□□□□□ -0.01
YBX1-202ENST00000332220 GNG13Q9P2W3 67 aa15□□□□□ -0.01
YBX1-202ENST00000332220 TENM2Q9NT68 2774 aa15□□□□□ -0.01
YBX1-202ENST00000332220 PLAC8L1A1L4L8 177 aa14.99□□□□□ -0.01
YBX1-202ENST00000332220 F6UZH7 168 aa14.99□□□□□ -0.01
YBX1-202ENST00000332220 PRNTQ86SH4 94 aa14.99□□□□□ -0.01
YBX1-202ENST00000332220 HIST1H2BAQ96A08 127 aa14.99□□□□□ -0.01
YBX1-202ENST00000332220 PYGO2Q9BRQ0 406 aa14.99□□□□□ -0.01
YBX1-202ENST00000332220 TREM1Q9NP99 234 aa14.99□□□□□ -0.01
YBX1-202ENST00000332220 DYNC2H1Q8NCM8 4307 aaKnown RBP14.98□□□□□ -0.01
YBX1-202ENST00000332220 TEX46H3BTG2 121 aa14.98□□□□□ -0.01
YBX1-202ENST00000332220 CASC10Q5T4H9 136 aa14.98□□□□□ -0.01
YBX1-202ENST00000332220 RNASE8Q8TDE3 154 aaKnown RBP14.98□□□□□ -0.01
YBX1-202ENST00000332220 C8orf49Q96NF6 230 aa14.98□□□□□ -0.01
YBX1-202ENST00000332220 MANBALQ9NQG1 85 aa14.98□□□□□ -0.01
YBX1-202ENST00000332220 CXorf65A6NEN9 183 aa14.97□□□□□ -0.01
YBX1-202ENST00000332220 FAM222AQ5U5X8 452 aa14.97□□□□□ -0.01
YBX1-202ENST00000332220 Q6AWC8 147 aa14.97□□□□□ -0.01
YBX1-202ENST00000332220 ZNF767PQ75MW2 155 aa14.97□□□□□ -0.01
YBX1-202ENST00000332220 TMEM263Q8WUH6 116 aaKnown RBP14.97□□□□□ -0.01
YBX1-202ENST00000332220 C16orf74Q96GX8 76 aa14.97□□□□□ -0.01
YBX1-202ENST00000332220 TCEAL7Q9BRU2 100 aa14.97□□□□□ -0.01
YBX1-202ENST00000332220 NDFIP1Q9BT67 221 aa14.97□□□□□ -0.01
YBX1-202ENST00000332220 DKK2Q9UBU2 259 aa14.97□□□□□ -0.01
YBX1-202ENST00000332220 FBLL1A6NHQ2 334 aaKnown RBP14.96□□□□□ -0.01
YBX1-202ENST00000332220 C11orf94C9JXX5 98 aa14.96□□□□□ -0.01
YBX1-202ENST00000332220 Q86TA4 180 aa14.96□□□□□ -0.01
YBX1-202ENST00000332220 LINC00467Q9BRT7 94 aa14.96□□□□□ -0.01
YBX1-202ENST00000332220 SCO2A0A1W2PP80 73 aa14.95□□□□□ -0.02
YBX1-202ENST00000332220 SPART-AS1P0CW21 52 aa14.95□□□□□ -0.02
YBX1-202ENST00000332220 C12orf74Q32Q52 190 aa14.95□□□□□ -0.02
YBX1-202ENST00000332220 ZNF493Q6ZR52 646 aa14.95□□□□□ -0.02
YBX1-202ENST00000332220 IGHV1OR15-1A0A075B7D0 117 aa14.94□□□□□ -0.02
YBX1-202ENST00000332220 RGS13O14921 159 aa14.94□□□□□ -0.02
YBX1-202ENST00000332220 ZNF80P51504 273 aaPredicted RBP14.94□□□□□ -0.02
YBX1-202ENST00000332220 BLOC1S1P78537 153 aa14.94□□□□□ -0.02
YBX1-202ENST00000332220 MUC21Q5SSG8 566 aa14.94□□□□□ -0.02
YBX1-202ENST00000332220 Q6ZTC4 211 aa14.94□□□□□ -0.02
YBX1-202ENST00000332220 EIF4E3Q8N5X7 224 aaKnown RBP14.94□□□□□ -0.02
YBX1-202ENST00000332220 C2CD4CQ8TF44 421 aa14.94□□□□□ -0.02
YBX1-202ENST00000332220 TP53TG3Q9ULZ0 132 aa14.94□□□□□ -0.02
YBX1-202ENST00000332220 KLF12Q9Y4X4 402 aa14.94□□□□□ -0.02
YBX1-202ENST00000332220 AKR1C3P42330 323 aa14.93□□□□□ -0.02
YBX1-202ENST00000332220 PHLDA1Q8WV24 401 aaPredicted RBP14.93□□□□□ -0.02
YBX1-202ENST00000332220 FMC1Q96HJ9 113 aa14.93□□□□□ -0.02
YBX1-202ENST00000332220 CBY3A6NI87 242 aa14.92□□□□□ -0.02
YBX1-202ENST00000332220 UBE2G1P62253 170 aa14.92□□□□□ -0.02
YBX1-202ENST00000332220 ANXA2RQ3ZCQ2 193 aa14.92□□□□□ -0.02
YBX1-202ENST00000332220 SAPCD1Q5SSQ6 148 aa14.92□□□□□ -0.02
YBX1-202ENST00000332220 C11orf72Q8NBR9 251 aa14.92□□□□□ -0.02
YBX1-202ENST00000332220 LYPD6BQ8NI32 183 aa14.92□□□□□ -0.02
YBX1-202ENST00000332220 TRAV21A0A0B4J279 112 aa14.91□□□□□ -0.02
YBX1-202ENST00000332220 GCGP01275 180 aa14.91□□□□□ -0.02
YBX1-202ENST00000332220 IFNA1P01562 189 aa14.91□□□□□ -0.02
YBX1-202ENST00000332220 BCL2P10415 239 aa14.91□□□□□ -0.02
YBX1-202ENST00000332220 TMEM183BQ1AE95 376 aa14.91□□□□□ -0.02
YBX1-202ENST00000332220 SMUG1Q53HV7 270 aa14.91□□□□□ -0.02
YBX1-202ENST00000332220 NOP10Q9NPE3 64 aaKnown RBP14.91□□□□□ -0.02
YBX1-202ENST00000332220 GSN-AS1Q9NRJ2 163 aa14.91□□□□□ -0.02
YBX1-202ENST00000332220 MUC4Q99102 2169 aa14.9□□□□□ -0.02
YBX1-202ENST00000332220 TRBV6-1A0A0K0K1D8 114 aa14.9□□□□□ -0.02
YBX1-202ENST00000332220 TEX48A0A1B0GUV7 120 aa14.9□□□□□ -0.02
YBX1-202ENST00000332220 LYRM9A8MSI8 78 aa14.9□□□□□ -0.02
YBX1-202ENST00000332220 MEF2BQ02080 365 aaPredicted RBP14.9□□□□□ -0.02
YBX1-202ENST00000332220 CEMP1Q6PRD7 247 aaPredicted RBP14.9□□□□□ -0.02
YBX1-202ENST00000332220 TEX261Q6UWH6 196 aa14.9□□□□□ -0.02
YBX1-202ENST00000332220 C11orf52Q96A22 123 aa14.9□□□□□ -0.02
YBX1-202ENST00000332220 C11orf21Q9P2W6 132 aa14.9□□□□□ -0.02
YBX1-202ENST00000332220 NAGKQ9UJ70 344 aa14.9□□□□□ -0.02
YBX1-202ENST00000332220 TIMM8BQ9Y5J9 83 aaPredicted RBP14.9□□□□□ -0.02
YBX1-202ENST00000332220 PLECQ15149 4684 aaKnown RBP14.9□□□□□ -0.02
YBX1-202ENST00000332220 ZNF680Q8NEM1 530 aa14.89□□□□□ -0.03
YBX1-202ENST00000332220 TXNDC17Q9BRA2 123 aa14.89□□□□□ -0.03
YBX1-202ENST00000332220 NACAE9PAV3 2078 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 NUPR2A6NF83 97 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 SNURFLB1AK76 121 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 LTAP01374 205 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 DAD1P61803 113 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 FAM159AQ6UWV7 190 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 PCNPQ8WW12 178 aaKnown RBP14.88□□□□□ -0.03
YBX1-202ENST00000332220 ZC2HC1AQ96GY0 325 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 DERL1Q9BUN8 251 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 VAX2Q9UIW0 290 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 ZFP30Q9Y2G7 519 aa14.88□□□□□ -0.03
YBX1-202ENST00000332220 PFN1P07737 140 aaKnown RBP14.87□□□□□ -0.03
YBX1-202ENST00000332220 TDRG1Q3Y452 100 aa14.87□□□□□ -0.03
YBX1-202ENST00000332220 IBA57Q5T440 356 aaKnown RBP14.87□□□□□ -0.03
YBX1-202ENST00000332220 COX8CQ7Z4L0 72 aa14.87□□□□□ -0.03
YBX1-202ENST00000332220 TMEM183AQ8IXX5 376 aa14.87□□□□□ -0.03
YBX1-202ENST00000332220 TRAV10A0A0B4J240 114 aa14.86□□□□□ -0.03
YBX1-202ENST00000332220 S100A9P06702 114 aaKnown RBP14.86□□□□□ -0.03
YBX1-202ENST00000332220 DEFB130BP0DP73 79 aa14.86□□□□□ -0.03
YBX1-202ENST00000332220 DEFB130AP0DP74 79 aa14.86□□□□□ -0.03
YBX1-202ENST00000332220 CRIP1P50238 77 aa14.86□□□□□ -0.03
YBX1-202ENST00000332220 TCL1AP56279 114 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms