RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 BDP1A6H8Y1 2624 aa8.46□□□□□ -1.05
CLN8-201ENST00000331222 LOC105371267A0A1B0GV96 52 aa8.46□□□□□ -1.05
CLN8-201ENST00000331222 REG4Q9BYZ8 158 aa8.46□□□□□ -1.05
CLN8-201ENST00000331222 IGHV4-59P01825 116 aa8.46□□□□□ -1.06
CLN8-201ENST00000331222 C3orf79P0CE67 100 aa8.46□□□□□ -1.06
CLN8-201ENST00000331222 CYYR1Q96J86 154 aa8.46□□□□□ -1.06
CLN8-201ENST00000331222 GRNP28799 593 aaKnown RBP8.46□□□□□ -1.06
CLN8-201ENST00000331222 CENPFP49454 3210 aa8.46□□□□□ -1.06
CLN8-201ENST00000331222 IGLV3-32A0A0A0MS00 114 aa8.45□□□□□ -1.06
CLN8-201ENST00000331222 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
CLN8-201ENST00000331222 GNRH2O43555 120 aa8.45□□□□□ -1.06
CLN8-201ENST00000331222 TNRC6AQ8NDV7 1962 aaKnown RBP8.45□□□□□ -1.06
CLN8-201ENST00000331222 C9orf153Q5TBE3 101 aa8.45□□□□□ -1.06
CLN8-201ENST00000331222 IGHV1OR15-1A0A075B7D0 117 aa8.45□□□□□ -1.06
CLN8-201ENST00000331222 Q86TA4 180 aa8.45□□□□□ -1.06
CLN8-201ENST00000331222 HIST3H2BBQ8N257 126 aa8.45□□□□□ -1.06
CLN8-201ENST00000331222 F8W735 103 aaPredicted RBP8.45□□□□□ -1.06
CLN8-201ENST00000331222 CDKN1BP46527 198 aa8.45□□□□□ -1.06
CLN8-201ENST00000331222 FGF6P10767 208 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 NDUFAF3Q9BU61 184 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 WDR86Q86TI4 376 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 OVOL2Q9BRP0 275 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 SMPXQ9UHP9 88 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 UBE2CO00762 179 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 TRACP01848 142 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 U3KQE9 123 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 TEX48A0A1B0GUV7 120 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 J3QRE1 110 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 DEFB112Q30KQ8 113 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 Q6ZS92 163 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 K7ERJ3 54 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 TMEM75Q8N9X5 138 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 BAALCQ8WXS3 180 aa8.44□□□□□ -1.06
CLN8-201ENST00000331222 CSRP3P50461 194 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 CHKB-CPT1BH3BT56 60 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 RMI2Q96E14 147 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 SHANK2-AS3Q9BTD1 123 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 Q6ZRM9 215 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 CFHR4Q92496 578 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 PLXNB1O43157 2135 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 SPATA25Q9BR10 227 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 NDUFS8O00217 210 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 B3GALT5-AS1P59052 145 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 ZNF503Q96F45 646 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 C17orf77Q96MU5 243 aa8.43□□□□□ -1.06
CLN8-201ENST00000331222 TSSC4Q9Y5U2 329 aaPredicted RBP8.43□□□□□ -1.06
CLN8-201ENST00000331222 OOSP1A8MZH6 123 aa8.42□□□□□ -1.06
CLN8-201ENST00000331222 MRPL51Q4U2R6 128 aaKnown RBP8.42□□□□□ -1.06
CLN8-201ENST00000331222 NBL1P41271 181 aa8.42□□□□□ -1.06
CLN8-201ENST00000331222 SDHAF1A6NFY7 115 aa8.42□□□□□ -1.06
CLN8-201ENST00000331222 SRSF8Q9BRL6 282 aaKnown RBP8.42□□□□□ -1.06
CLN8-201ENST00000331222 TET2Q6N021 2002 aaPredicted RBP8.42□□□□□ -1.06
CLN8-201ENST00000331222 SEM1Q6ZVN7 128 aa8.42□□□□□ -1.06
CLN8-201ENST00000331222 FGF16O43320 207 aa8.42□□□□□ -1.06
CLN8-201ENST00000331222 NMSQ5H8A3 153 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 CITED1Q99966 193 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 NEUROG3Q9Y4Z2 214 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 LINC01549A6NIU2 74 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 FOXE3Q13461 319 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 C2orf66Q6UXQ4 117 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 NPBQ8NG41 125 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 UBL5Q9BZL1 73 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 PFN1P07737 140 aaKnown RBP8.41□□□□□ -1.06
CLN8-201ENST00000331222 EGR2P11161 476 aaPredicted RBP8.41□□□□□ -1.06
CLN8-201ENST00000331222 TIRAPP58753 221 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 PIFOQ8TCI5 191 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 IGHV1-24A0A0C4DH33 117 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 GATA3P23771 443 aa8.41□□□□□ -1.06
CLN8-201ENST00000331222 PTPRQQ9UMZ3 2332 aa8.4□□□□□ -1.06
CLN8-201ENST00000331222 PCNTO95613 3336 aa8.4□□□□□ -1.06
CLN8-201ENST00000331222 HOXB4P17483 251 aaPredicted RBP8.4□□□□□ -1.06
CLN8-201ENST00000331222 NCR3O14931 201 aa8.4□□□□□ -1.06
CLN8-201ENST00000331222 ZNF134P52741 427 aa8.4□□□□□ -1.06
CLN8-201ENST00000331222 GYPEP15421 78 aa8.4□□□□□ -1.07
CLN8-201ENST00000331222 MUC4Q99102 2169 aa8.4□□□□□ -1.07
CLN8-201ENST00000331222 PROP1O75360 226 aa8.4□□□□□ -1.07
CLN8-201ENST00000331222 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.07
CLN8-201ENST00000331222 MRPL52Q86TS9 123 aaKnown RBP8.4□□□□□ -1.07
CLN8-201ENST00000331222 RNF5Q99942 180 aa8.4□□□□□ -1.07
CLN8-201ENST00000331222 SHISA9B4DS77 424 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 BOD1L2Q8IYS8 172 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 WIPF2Q8TF74 440 aaPredicted RBP8.39□□□□□ -1.07
CLN8-201ENST00000331222 C14orf132Q9NPU4 83 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 MAJINQ3KP22 176 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 CYTL1Q9NRR1 136 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 FAM231BA6NCW3 169 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 IGHV4-38-2P0DP08 117 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 C17orf58Q2M2W7 97 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 PLXNA2O75051 1894 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 ZFP36P26651 326 aaKnown RBP8.39□□□□□ -1.07
CLN8-201ENST00000331222 TMEM14EPQ6UXP3 125 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 DSCAMO60469 2012 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 INAFM2P0DMQ5 153 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 C1orf43Q9BWL3 253 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 LYPD1Q8N2G4 141 aa8.39□□□□□ -1.07
CLN8-201ENST00000331222 IGLL5B9A064 214 aa8.38□□□□□ -1.07
CLN8-201ENST00000331222 HIST2H2BDQ6DRA6 164 aa8.38□□□□□ -1.07
CLN8-201ENST00000331222 C15orf53Q8NAA6 179 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms