RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RBPMS2Q6ZRY4 209 aaKnown RBP12.3□□□□□ -0.44
PDGFB-201ENST00000331163 SMIM15Q7Z3B0 74 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 SPATA12Q7Z6I5 190 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 GRAMD2BQ96HH9 432 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 AP1S3Q96PC3 154 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 MEGF9Q9H1U4 602 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 NSD1Q96L73 2696 aaPredicted RBP12.29□□□□□ -0.44
PDGFB-201ENST00000331163 C9JCJ5 164 aa12.29□□□□□ -0.44
PDGFB-201ENST00000331163 ISLRO14498 428 aa12.29□□□□□ -0.44
PDGFB-201ENST00000331163 ORM1P02763 201 aa12.29□□□□□ -0.44
PDGFB-201ENST00000331163 Q8N6K4 173 aa12.29□□□□□ -0.44
PDGFB-201ENST00000331163 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
PDGFB-201ENST00000331163 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
PDGFB-201ENST00000331163 RHPN1-AS1Q9BWJ2 59 aa12.29□□□□□ -0.44
PDGFB-201ENST00000331163 SLC25A2Q9BXI2 301 aa12.29□□□□□ -0.44
PDGFB-201ENST00000331163 PEF1Q9UBV8 284 aaKnown RBP12.29□□□□□ -0.44
PDGFB-201ENST00000331163 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
PDGFB-201ENST00000331163 AGRNO00468 2067 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 NBEAL2Q6ZNJ1 2754 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 F6UB75 175 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 IGHG2P01859 326 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 FXYD7P58549 80 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 PVRIGQ6DKI7 326 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 NUP35Q8NFH5 326 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 CCDC140Q96MF4 163 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 OSTCQ9NRP0 149 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 TRAV9-1A0A075B6T8 112 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 IZUMO1RA6ND01 250 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 OCIAD2Q56VL3 154 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 RAB37Q96AX2 223 aa12.28□□□□□ -0.44
PDGFB-201ENST00000331163 LEPROTL1O95214 131 aa12.27□□□□□ -0.44
PDGFB-201ENST00000331163 ERCC8Q13216 396 aa12.27□□□□□ -0.44
PDGFB-201ENST00000331163 GDF5OSQ5U4N7 250 aa12.27□□□□□ -0.44
PDGFB-201ENST00000331163 Q6YL49 198 aa12.27□□□□□ -0.44
PDGFB-201ENST00000331163 MRPS16Q9Y3D3 137 aaKnown RBP12.27□□□□□ -0.44
PDGFB-201ENST00000331163 SLC25A34Q6PIV7 304 aa12.27□□□□□ -0.45
PDGFB-201ENST00000331163 PRSS57Q6UWY2 283 aa12.27□□□□□ -0.45
PDGFB-201ENST00000331163 SAP30O75446 220 aa12.27□□□□□ -0.45
PDGFB-201ENST00000331163 NUDT10Q8NFP7 164 aa12.27□□□□□ -0.45
PDGFB-201ENST00000331163 NUDT11Q96G61 164 aa12.27□□□□□ -0.45
PDGFB-201ENST00000331163 MRPL32Q9BYC8 188 aaKnown RBP12.27□□□□□ -0.45
PDGFB-201ENST00000331163 PEX7O00628 323 aa12.26□□□□□ -0.45
PDGFB-201ENST00000331163 FOXC2Q99958 501 aa12.26□□□□□ -0.45
PDGFB-201ENST00000331163 HIST1H1EP10412 219 aaKnown RBP12.26□□□□□ -0.45
PDGFB-201ENST00000331163 TOMM40O96008 361 aa12.25□□□□□ -0.45
PDGFB-201ENST00000331163 SCGB2A2Q13296 93 aa12.25□□□□□ -0.45
PDGFB-201ENST00000331163 EBI3Q14213 229 aa12.25□□□□□ -0.45
PDGFB-201ENST00000331163 SERTM2A0A1B0GWG4 89 aa12.25□□□□□ -0.45
PDGFB-201ENST00000331163 FBLL1A6NHQ2 334 aaKnown RBP12.25□□□□□ -0.45
PDGFB-201ENST00000331163 ZNF502Q8TBZ5 544 aa12.25□□□□□ -0.45
PDGFB-201ENST00000331163 TRBV7-1A0A0A6YYK4 115 aa12.25□□□□□ -0.45
PDGFB-201ENST00000331163 SPRY2O43597 315 aa12.25□□□□□ -0.45
PDGFB-201ENST00000331163 CITED2Q99967 270 aaPredicted RBP12.25□□□□□ -0.45
PDGFB-201ENST00000331163 ESM1Q9NQ30 184 aa12.25□□□□□ -0.45
PDGFB-201ENST00000331163 IGHV4OR15-8A0A075B7B6 117 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 A0A087WW49 117 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 CHEK1O14757 476 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 PSG9Q00887 426 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 PSMG4Q5JS54 123 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 GAGE12BA1L429 117 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 C16orf54Q6UWD8 224 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 Q6ZSV7 163 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 C11orf52Q96A22 123 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 ZNF503Q96F45 646 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 CRYGCP07315 174 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 AARDQ4LEZ3 155 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 SIGLEC15Q6ZMC9 328 aa12.24□□□□□ -0.45
PDGFB-201ENST00000331163 CD28P10747 220 aa12.23□□□□□ -0.45
PDGFB-201ENST00000331163 HOXD3P31249 432 aaPredicted RBP12.23□□□□□ -0.45
PDGFB-201ENST00000331163 KRTAP1-3Q8IUG1 177 aa12.23□□□□□ -0.45
PDGFB-201ENST00000331163 TAX1BP3O14907 124 aa12.23□□□□□ -0.45
PDGFB-201ENST00000331163 SHANK2-AS3Q9BTD1 123 aa12.23□□□□□ -0.45
PDGFB-201ENST00000331163 EPDR1Q9UM22 224 aa12.23□□□□□ -0.45
PDGFB-201ENST00000331163 CD5LO43866 347 aa12.23□□□□□ -0.45
PDGFB-201ENST00000331163 TEX29Q8N6K0 151 aa12.23□□□□□ -0.45
PDGFB-201ENST00000331163 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
PDGFB-201ENST00000331163 PDZD2O15018 2839 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 TRAV8-6A0A0B4J262 113 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 GAGE10A6NGK3 116 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 IGLV2-8P01709 118 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 S100A4P26447 101 aaKnown RBP12.22□□□□□ -0.45
PDGFB-201ENST00000331163 NDFIP1Q9BT67 221 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 C19orf24Q9BVV8 132 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 TMEM191AQ9H0A3 160 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 A0A096LNT2 108 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 K7EP13 123 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 K7ERU9 68 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 COX19Q49B96 90 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 THAP8Q8NA92 274 aa12.22□□□□□ -0.45
PDGFB-201ENST00000331163 SMIM27A0A1W2PRY6 76 aa12.21□□□□□ -0.45
PDGFB-201ENST00000331163 P01737 135 aa12.21□□□□□ -0.45
PDGFB-201ENST00000331163 BVES-AS1Q5T3Y7 98 aa12.21□□□□□ -0.45
PDGFB-201ENST00000331163 OR8A1Q8NGG7 326 aa12.21□□□□□ -0.45
PDGFB-201ENST00000331163 FXYD5Q96DB9 178 aa12.21□□□□□ -0.45
PDGFB-201ENST00000331163 LOC389332A0A1B0GUA5 103 aa12.21□□□□□ -0.45
PDGFB-201ENST00000331163 C2orf70A6NJV1 201 aa12.21□□□□□ -0.45
PDGFB-201ENST00000331163 TMEM78Q5T7P6 136 aa12.21□□□□□ -0.45
PDGFB-201ENST00000331163 A0A1W2PRE2 83 aa12.21□□□□□ -0.46
PDGFB-201ENST00000331163 C5orf17Q8NAS9 161 aa12.21□□□□□ -0.46
PDGFB-201ENST00000331163 USMG5Q96IX5 58 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms