RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.09□□□□□ -1.11
CHD3-201ENST00000330494 GAGE12HA6NDE8 117 aa8.09□□□□□ -1.11
CHD3-201ENST00000330494 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
CHD3-201ENST00000330494 C6orf226Q5I0X4 101 aa8.09□□□□□ -1.11
CHD3-201ENST00000330494 STPG4Q8N801 248 aa8.09□□□□□ -1.11
CHD3-201ENST00000330494 SMPXQ9UHP9 88 aa8.09□□□□□ -1.11
CHD3-201ENST00000330494 PLCE1Q9P212 2302 aa8.09□□□□□ -1.12
CHD3-201ENST00000330494 IGHV4-38-2P0DP08 117 aa8.09□□□□□ -1.12
CHD3-201ENST00000330494 IGHV4-30-2A0A087WSY4 118 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 F6UB75 175 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 TRACP01848 142 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 CLPSL2Q6UWE3 100 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 TMEM86BQ8N661 226 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 C1QTNF4Q9BXJ3 329 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 C9orf118A6NHY6 69 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 IGHV2-5P01817 119 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 ANXA2RQ3ZCQ2 193 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 C11orf53Q8IXP5 236 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 MUC6Q6W4X9 2439 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 B5MCH6 92 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 TMEM75Q8N9X5 138 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 JPT2Q9H910 190 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 TRBV19A0A075B6N1 114 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 C20orf144Q9BQM9 153 aa8.08□□□□□ -1.12
CHD3-201ENST00000330494 FNDC10F2Z333 226 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 H3BMM0 161 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 DAD1P61803 113 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 PRSS57Q6UWY2 283 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 UBE2WQ96B02 151 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 ETDBQ3ZM63 59 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 ZNF114Q8NC26 417 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 RNASE13Q5GAN3 156 aaKnown RBP8.07□□□□□ -1.12
CHD3-201ENST00000330494 LAMTOR3Q9UHA4 124 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 IGHV4-61A0A0C4DH41 118 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 SLX1AQ9BQ83 275 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 C1orf43Q9BWL3 253 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 NCOA6Q14686 2063 aaPredicted RBP8.07□□□□□ -1.12
CHD3-201ENST00000330494 E9PQ18 207 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 MORN3Q6PF18 240 aaPredicted RBP8.07□□□□□ -1.12
CHD3-201ENST00000330494 SPANXA1Q9NS26 97 aa8.07□□□□□ -1.12
CHD3-201ENST00000330494 VWC2LB2RUY7 222 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 CFPP27918 469 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 DKK4Q9UBT3 224 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 ANAPC10Q9UM13 185 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 COL4A4P53420 1690 aaPredicted RBP8.06□□□□□ -1.12
CHD3-201ENST00000330494 K7EP34 96 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 YPEL3P61236 119 aaPredicted RBP8.06□□□□□ -1.12
CHD3-201ENST00000330494 RASL11AQ6T310 242 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 TP53TG1Q9Y2A0 90 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 IGLV3-1P01715 115 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 KIAA1549Q9HCM3 1950 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 NUP210LQ5VU65 1888 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 GAGE6Q13070 117 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 PDE6HQ13956 83 aa8.06□□□□□ -1.12
CHD3-201ENST00000330494 H3BRN7 92 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 PFN1P07737 140 aaKnown RBP8.05□□□□□ -1.12
CHD3-201ENST00000330494 CDKN1BP46527 198 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 ZC2HC1BQ5TFG8 222 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 SMIM20Q8N5G0 67 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 ZC2HC1AQ96GY0 325 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 MRPL27Q9P0M9 148 aaKnown RBP8.05□□□□□ -1.12
CHD3-201ENST00000330494 INS-IGF2F8WCM5 200 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 ADORA2A-AS1P86434 159 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 ZNRF2Q8NHG8 242 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 MED12LQ86YW9 2145 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 SS18Q15532 418 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 RASL10AQ92737 203 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 PRIMA1Q86XR5 153 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 TIMM21Q9BVV7 248 aa8.05□□□□□ -1.12
CHD3-201ENST00000330494 NDUFA4O00483 81 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 SLURP1P55000 103 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 Q6ZVH6 145 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 TRPT1Q86TN4 253 aaKnown RBP8.04□□□□□ -1.12
CHD3-201ENST00000330494 APRG1Q8IVJ8 170 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 TRBV20-1A0A075B6N2 111 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 F8W1H4 67 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 MRPL51Q4U2R6 128 aaKnown RBP8.04□□□□□ -1.12
CHD3-201ENST00000330494 PPDPFLQ8WWR9 84 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 LY96Q9Y6Y9 160 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 GHRHP01286 108 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 IGLV2-23P01705 113 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 CDPF1Q6NVV7 123 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 LINC00311Q8N616 119 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 IGLC2P0DOY2 106 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 IGHV1OR15-1A0A075B7D0 117 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 IGF2BP2-AS1Q96M15 143 aa8.04□□□□□ -1.12
CHD3-201ENST00000330494 GNRH2O43555 120 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 PFN2P35080 140 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 BLCAPP62952 87 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 SLAQ13239 276 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 Q6ZWC4 215 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 FXYD5Q96DB9 178 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 LHBP01229 141 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 IGLC1P0CG04 106 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 CGB3P0DN86 165 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 DEFB113Q30KQ7 82 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 FOXE3Q13461 319 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 PLEKHB2Q96CS7 222 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 PRR25Q96S07 402 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms