RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 C17orf77Q96MU5 243 aa11.17□□□□□ -0.62
SYNGR1-203ENST00000328933 TMEM70Q9BUB7 260 aa11.17□□□□□ -0.62
SYNGR1-203ENST00000328933 GAGE12JA6NER3 117 aa11.17□□□□□ -0.62
SYNGR1-203ENST00000328933 GAGE1Q13065 139 aa11.17□□□□□ -0.62
SYNGR1-203ENST00000328933 GAGE4Q13068 117 aa11.17□□□□□ -0.62
SYNGR1-203ENST00000328933 GAGE5Q13069 117 aa11.17□□□□□ -0.62
SYNGR1-203ENST00000328933 GAGE13Q4V321 117 aa11.17□□□□□ -0.62
SYNGR1-203ENST00000328933 VCX2Q9H322 139 aa11.17□□□□□ -0.62
SYNGR1-203ENST00000328933 TRBV9A0A0B4J1U6 114 aa11.16□□□□□ -0.62
SYNGR1-203ENST00000328933 IGLL1P15814 213 aa11.16□□□□□ -0.62
SYNGR1-203ENST00000328933 FANCD2OSQ96PS1 177 aa11.16□□□□□ -0.62
SYNGR1-203ENST00000328933 NCR2O95944 276 aa11.16□□□□□ -0.62
SYNGR1-203ENST00000328933 UNQ9165/PRO28630Q6UXU0 137 aa11.16□□□□□ -0.62
SYNGR1-203ENST00000328933 A0A096LPF7 62 aa11.15□□□□□ -0.62
SYNGR1-203ENST00000328933 TRAV8-6A0A0B4J262 113 aa11.15□□□□□ -0.62
SYNGR1-203ENST00000328933 HNRNPA3P51991 378 aaKnown RBP11.15□□□□□ -0.62
SYNGR1-203ENST00000328933 DPH3P1Q9H4G8 78 aa11.15□□□□□ -0.62
SYNGR1-203ENST00000328933 PFN1P07737 140 aaKnown RBP11.15□□□□□ -0.62
SYNGR1-203ENST00000328933 DEFA6Q01524 100 aa11.15□□□□□ -0.62
SYNGR1-203ENST00000328933 SLC25A2Q9BXI2 301 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 NOP10Q9NPE3 64 aaKnown RBP11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 TRIOO75962 3097 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 A0A0J9YY99 117 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 PPBPP02775 128 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 IGF1P05019 195 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 BUB3O43684 328 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 LYL1P12980 280 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 LGALS3P17931 250 aaKnown RBP11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 ZNF114Q8NC26 417 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 OR11H2Q8NH07 326 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 GSN-AS1Q9NRJ2 163 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 RHODO00212 210 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 SRSF3P84103 164 aaKnown RBP11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 IGF2BP2-AS1Q96M15 143 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 TMEM14CQ9P0S9 112 aa11.14□□□□□ -0.63
SYNGR1-203ENST00000328933 CIRBPQ14011 172 aaKnown RBP11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 ZNF414Q96IQ9 312 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 C8orf49Q96NF6 230 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 TMEM160Q9NX00 188 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 CYSLTR1Q9Y271 337 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 K7EMT4 169 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 DEFB4AO15263 64 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 PRR20EP86478 221 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 PRR20CP86479 221 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 PRR20DP86480 221 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 PRR20BP86481 221 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 PRR20AP86496 221 aa11.13□□□□□ -0.63
SYNGR1-203ENST00000328933 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 DEFB125Q8N687 156 aa11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 ALKBH7Q9BT30 221 aaPredicted RBP11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 MRPL16Q9NX20 251 aaKnown RBP11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 TRAV25A0A0B4J276 109 aa11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 IFITM10A6NMD0 228 aa11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 PAX4O43316 350 aa11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 AGPAT4-IT1Q9H0P7 198 aa11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 GGTLC3B5MD39 225 aa11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.12□□□□□ -0.63
SYNGR1-203ENST00000328933 ADAMTS20P59510 1910 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 ATP5LO75964 103 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 IGLV2-14P01704 120 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 SPART-AS1P0CW21 52 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 CRIP3Q6Q6R5 217 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 H3BRM9 83 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 ESM1Q9NQ30 184 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 VWC2LB2RUY7 222 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 PSMB2P49721 201 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 ITPR3Q14573 2671 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 WDFY4Q6ZS81 3184 aa11.11□□□□□ -0.63
SYNGR1-203ENST00000328933 C16orf54Q6UWD8 224 aa11.1□□□□□ -0.63
SYNGR1-203ENST00000328933 MRAP2Q96G30 205 aa11.1□□□□□ -0.63
SYNGR1-203ENST00000328933 DSPP15924 2871 aaKnown RBP11.1□□□□□ -0.63
SYNGR1-203ENST00000328933 EBI3Q14213 229 aa11.1□□□□□ -0.63
SYNGR1-203ENST00000328933 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
SYNGR1-203ENST00000328933 PYGO2Q9BRQ0 406 aa11.1□□□□□ -0.63
SYNGR1-203ENST00000328933 FLNAP21333 2647 aaKnown RBP11.1□□□□□ -0.63
SYNGR1-203ENST00000328933 C1orf229Q6ZS94 237 aaPredicted RBP11.1□□□□□ -0.63
SYNGR1-203ENST00000328933 A8MWV9 139 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 ADMP35318 185 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 SRSF1Q07955 248 aaKnown RBP eCLIP11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 Q6ZPA2 131 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 Q6ZS46 218 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 TMEM75Q8N9X5 138 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 ZNF702PQ9H963 129 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 UNC80Q8N2C7 3258 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 LY6LH3BQJ8 138 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 PRB2P02812 416 aaPredicted RBP11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 DEFB1P60022 68 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 OR13C6PQ8NH95 151 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 PAM16Q9Y3D7 125 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 NXT2Q9NPJ8 142 aaKnown RBP11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 MGAQ8IWI9 3026 aa11.09□□□□□ -0.63
SYNGR1-203ENST00000328933 GCSHP23434 173 aa11.08□□□□□ -0.64
SYNGR1-203ENST00000328933 TMEM256Q8N2U0 113 aa11.08□□□□□ -0.64
SYNGR1-203ENST00000328933 ORMDL2Q53FV1 153 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms