RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 IGHV1-69P01742 117 aa11.59□□□□□ -0.55
NUP98-201ENST00000324932 Q6ZVH6 145 aa11.59□□□□□ -0.55
NUP98-201ENST00000324932 SH2D6Q7Z4S9 175 aa11.59□□□□□ -0.55
NUP98-201ENST00000324932 CRIPAKQ8N1N5 446 aa11.59□□□□□ -0.55
NUP98-201ENST00000324932 J3KT08 172 aa11.59□□□□□ -0.55
NUP98-201ENST00000324932 Q9H8V8 135 aa11.59□□□□□ -0.55
NUP98-201ENST00000324932 LENEPQ9Y5L5 61 aa11.59□□□□□ -0.55
NUP98-201ENST00000324932 H0YGX0 51 aa11.58□□□□□ -0.56
NUP98-201ENST00000324932 LY6HO94772 140 aa11.58□□□□□ -0.56
NUP98-201ENST00000324932 MSMBP08118 114 aa11.58□□□□□ -0.56
NUP98-201ENST00000324932 LOXP28300 417 aaPredicted RBP11.58□□□□□ -0.56
NUP98-201ENST00000324932 FOXI2Q6ZQN5 318 aa11.58□□□□□ -0.56
NUP98-201ENST00000324932 SLC25A29Q8N8R3 303 aa11.58□□□□□ -0.56
NUP98-201ENST00000324932 MPDZO75970 2070 aa11.58□□□□□ -0.56
NUP98-201ENST00000324932 C15orf65H3BRN8 121 aa11.58□□□□□ -0.56
NUP98-201ENST00000324932 TEN1Q86WV5 123 aa11.58□□□□□ -0.56
NUP98-201ENST00000324932 MRPL53Q96EL3 112 aaKnown RBP11.58□□□□□ -0.56
NUP98-201ENST00000324932 CR1LQ2VPA4 569 aa11.58□□□□□ -0.56
NUP98-201ENST00000324932 RUSC1-AS1Q66K80 236 aa11.57□□□□□ -0.56
NUP98-201ENST00000324932 A0A0B4J2C4 111 aa11.57□□□□□ -0.56
NUP98-201ENST00000324932 Q6ZR03 302 aa11.57□□□□□ -0.56
NUP98-201ENST00000324932 IGHG2P01859 326 aa11.57□□□□□ -0.56
NUP98-201ENST00000324932 ZNF491Q8N8L2 437 aa11.57□□□□□ -0.56
NUP98-201ENST00000324932 SCN10AQ9Y5Y9 1956 aa11.57□□□□□ -0.56
NUP98-201ENST00000324932 POLEQ07864 2286 aa11.57□□□□□ -0.56
NUP98-201ENST00000324932 IGHV7-4-1A0A0J9YVY3 117 aa11.57□□□□□ -0.56
NUP98-201ENST00000324932 FUSP35637 526 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUP98-201ENST00000324932 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
NUP98-201ENST00000324932 RBAKDNA6NC62 111 aa11.56□□□□□ -0.56
NUP98-201ENST00000324932 ANGP03950 147 aaKnown RBP11.56□□□□□ -0.56
NUP98-201ENST00000324932 MTCL1Q9Y4B5 1905 aaKnown RBP11.56□□□□□ -0.56
NUP98-201ENST00000324932 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
NUP98-201ENST00000324932 WDR86Q86TI4 376 aa11.55□□□□□ -0.56
NUP98-201ENST00000324932 A0A1B0GX51 115 aa11.55□□□□□ -0.56
NUP98-201ENST00000324932 RNASE13Q5GAN3 156 aaKnown RBP11.55□□□□□ -0.56
NUP98-201ENST00000324932 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
NUP98-201ENST00000324932 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
NUP98-201ENST00000324932 AGPAT4-IT1Q9H0P7 198 aa11.54□□□□□ -0.56
NUP98-201ENST00000324932 DYNAPQ8N1N2 210 aa11.54□□□□□ -0.56
NUP98-201ENST00000324932 NDUFS5O43920 106 aa11.54□□□□□ -0.56
NUP98-201ENST00000324932 GNLYP22749 145 aa11.54□□□□□ -0.56
NUP98-201ENST00000324932 APOC4P55056 127 aa11.54□□□□□ -0.56
NUP98-201ENST00000324932 CREBBPQ92793 2442 aa11.53□□□□□ -0.56
NUP98-201ENST00000324932 HIGD1BQ9P298 99 aa11.53□□□□□ -0.56
NUP98-201ENST00000324932 FAM236AA0A1B0GUQ0 79 aa11.53□□□□□ -0.56
NUP98-201ENST00000324932 FAM236BA0A1B0GV22 79 aa11.53□□□□□ -0.56
NUP98-201ENST00000324932 MP68P56378 58 aa11.53□□□□□ -0.56
NUP98-201ENST00000324932 SLX1AQ9BQ83 275 aa11.53□□□□□ -0.56
NUP98-201ENST00000324932 H3BUA1 57 aa11.53□□□□□ -0.56
NUP98-201ENST00000324932 PSMB8P28062 276 aa11.53□□□□□ -0.56
NUP98-201ENST00000324932 ANKRD39Q53RE8 183 aa11.53□□□□□ -0.56
NUP98-201ENST00000324932 TNS1Q9HBL0 1735 aaKnown RBP11.53□□□□□ -0.56
NUP98-201ENST00000324932 DIDO1Q9BTC0 2240 aaKnown RBP11.53□□□□□ -0.56
NUP98-201ENST00000324932 DUX4L9Q6RFH8 374 aaPredicted RBP11.53□□□□□ -0.56
NUP98-201ENST00000324932 NCOR1O75376 2440 aa11.52□□□□□ -0.56
NUP98-201ENST00000324932 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.56
NUP98-201ENST00000324932 ARFGEF3Q5TH69 2177 aa11.52□□□□□ -0.57
NUP98-201ENST00000324932 PARP14Q460N5 1801 aa11.52□□□□□ -0.57
NUP98-201ENST00000324932 RNASE8Q8TDE3 154 aaKnown RBP11.52□□□□□ -0.57
NUP98-201ENST00000324932 ASPHD1Q5U4P2 390 aa11.52□□□□□ -0.57
NUP98-201ENST00000324932 WNK2Q9Y3S1 2297 aa11.52□□□□□ -0.57
NUP98-201ENST00000324932 IGLV3-9A0A075B6K5 115 aa11.52□□□□□ -0.57
NUP98-201ENST00000324932 H3BQ85 93 aa11.52□□□□□ -0.57
NUP98-201ENST00000324932 ELANEP08246 267 aa11.51□□□□□ -0.57
NUP98-201ENST00000324932 IGFBPL1Q8WX77 278 aa11.51□□□□□ -0.57
NUP98-201ENST00000324932 MYOFQ9NZM1 2061 aa11.51□□□□□ -0.57
NUP98-201ENST00000324932 A4D1N5 150 aa11.51□□□□□ -0.57
NUP98-201ENST00000324932 ZFP2Q6ZN57 461 aa11.51□□□□□ -0.57
NUP98-201ENST00000324932 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
NUP98-201ENST00000324932 TRAV4A0A0B4J268 109 aa11.51□□□□□ -0.57
NUP98-201ENST00000324932 MUSTN1Q8IVN3 82 aa11.51□□□□□ -0.57
NUP98-201ENST00000324932 C8orf31Q8N9H6 132 aa11.5□□□□□ -0.57
NUP98-201ENST00000324932 XCL1P47992 114 aa11.5□□□□□ -0.57
NUP98-201ENST00000324932 WFDC9Q8NEX5 89 aa11.5□□□□□ -0.57
NUP98-201ENST00000324932 IGF2BP2-AS1Q96M15 143 aa11.5□□□□□ -0.57
NUP98-201ENST00000324932 PSME4Q14997 1843 aa11.5□□□□□ -0.57
NUP98-201ENST00000324932 UBR3Q6ZT12 1888 aa11.5□□□□□ -0.57
NUP98-201ENST00000324932 GNRH2O43555 120 aa11.5□□□□□ -0.57
NUP98-201ENST00000324932 OPRPNQ99935 248 aaPredicted RBP11.5□□□□□ -0.57
NUP98-201ENST00000324932 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.49□□□□□ -0.57
NUP98-201ENST00000324932 IGKV2-29A2NJV5 120 aaPredicted RBP11.49□□□□□ -0.57
NUP98-201ENST00000324932 FOXI1Q12951 378 aa11.49□□□□□ -0.57
NUP98-201ENST00000324932 C17orf77Q96MU5 243 aa11.49□□□□□ -0.57
NUP98-201ENST00000324932 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
NUP98-201ENST00000324932 FOXE3Q13461 319 aa11.49□□□□□ -0.57
NUP98-201ENST00000324932 DOCK10Q96BY6 2186 aa11.49□□□□□ -0.57
NUP98-201ENST00000324932 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
NUP98-201ENST00000324932 CHKB-CPT1BH3BT56 60 aa11.49□□□□□ -0.57
NUP98-201ENST00000324932 IGLV3-1P01715 115 aa11.49□□□□□ -0.57
NUP98-201ENST00000324932 WFDC2Q14508 124 aa11.49□□□□□ -0.57
NUP98-201ENST00000324932 PATJQ8NI35 1801 aa11.48□□□□□ -0.57
NUP98-201ENST00000324932 UBE2BP63146 152 aa11.48□□□□□ -0.57
NUP98-201ENST00000324932 KAAG1Q9UBP8 84 aa11.48□□□□□ -0.57
NUP98-201ENST00000324932 GATA1P15976 413 aaPredicted RBP11.48□□□□□ -0.57
NUP98-201ENST00000324932 ABCA7Q8IZY2 2146 aa11.48□□□□□ -0.57
NUP98-201ENST00000324932 NUPR1O60356 82 aa11.48□□□□□ -0.57
NUP98-201ENST00000324932 FXYD2P54710 66 aa11.48□□□□□ -0.57
NUP98-201ENST00000324932 H3BT86 120 aa11.48□□□□□ -0.57
NUP98-201ENST00000324932 TAF1LQ8IZX4 1826 aa11.48□□□□□ -0.57
NUP98-201ENST00000324932 CADP27708 2225 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms