RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PRDM6Q9NQX0 595 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 IGLC1P0CG04 106 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 CFC1BP0CG36 223 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 CFC1P0CG37 223 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 TMEM14EPQ6UXP3 125 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 RS1O15537 224 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 TREML4Q6UXN2 200 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 Q6ZWC4 215 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 BTCP35070 178 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 CSDC2Q9Y534 153 aaKnown RBP7.91□□□□□ -1.14
COL12A1-201ENST00000322507 HIGD1BQ9P298 99 aa7.91□□□□□ -1.14
COL12A1-201ENST00000322507 CCDC168Q8NDH2 2452 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 FXYD7P58549 80 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 LY6G6FQ5SQ64 297 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 THAP8Q8NA92 274 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 C15orf32Q32M92 178 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 DKK2Q9UBU2 259 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 TINCRA0A1B0GVN0 87 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 SCRT2Q9NQ03 307 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 C10orf91Q5T1B1 145 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 A0A087WX48 190 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 F8VRH5 84 aa7.9□□□□□ -1.14
COL12A1-201ENST00000322507 KLF2Q9Y5W3 355 aaPredicted RBP7.9□□□□□ -1.14
COL12A1-201ENST00000322507 SPINK2P20155 84 aa7.9□□□□□ -1.15
COL12A1-201ENST00000322507 PPIFP30405 207 aaKnown RBP7.9□□□□□ -1.15
COL12A1-201ENST00000322507 CXCL6P80162 114 aa7.9□□□□□ -1.15
COL12A1-201ENST00000322507 RNF114Q9Y508 228 aa7.9□□□□□ -1.15
COL12A1-201ENST00000322507 SUPT4H1P63272 117 aaKnown RBP7.9□□□□□ -1.15
COL12A1-201ENST00000322507 TMEM75Q8N9X5 138 aa7.9□□□□□ -1.15
COL12A1-201ENST00000322507 ICOSQ9Y6W8 199 aa7.9□□□□□ -1.15
COL12A1-201ENST00000322507 TECTAO75443 2155 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 TMEM213A2RRL7 107 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 GPHA2Q96T91 129 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 UPK3BQ9BT76 320 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 A0A0U1RRA0 63 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 ZNF524Q96C55 264 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 H0YIZ8 118 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 TRBV12-3P01733 135 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 NREPQ16612 68 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 SERP2Q8N6R1 65 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 TRAV40A0A0B4J280 105 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 A0A1B0GUS0 222 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 EFNA4P52798 201 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 SP5Q6BEB4 398 aaPredicted RBP7.89□□□□□ -1.15
COL12A1-201ENST00000322507 HOXB4P17483 251 aaPredicted RBP7.89□□□□□ -1.15
COL12A1-201ENST00000322507 IGKV3-20P01619 116 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 Q8N8P6 123 aa7.89□□□□□ -1.15
COL12A1-201ENST00000322507 PFN2P35080 140 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 ZNF492Q9P255 531 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 TCL1BO95988 128 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 IGHV1-8P0DP01 117 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 TRPT1Q86TN4 253 aaKnown RBP7.88□□□□□ -1.15
COL12A1-201ENST00000322507 B4DSR2 109 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 C9JQL5 133 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 ZFP36L1Q07352 338 aaKnown RBP7.88□□□□□ -1.15
COL12A1-201ENST00000322507 CLUHP3Q96NS8 147 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 FAM27E3Q08E93 113 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 IGLL5B9A064 214 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 IGHV3-48P01763 117 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 LINC01560Q8TB33 94 aa7.88□□□□□ -1.15
COL12A1-201ENST00000322507 IGLL1P15814 213 aa7.87□□□□□ -1.15
COL12A1-201ENST00000322507 RHOHQ15669 191 aa7.87□□□□□ -1.15
COL12A1-201ENST00000322507 LSM4Q9Y4Z0 139 aaKnown RBP7.87□□□□□ -1.15
COL12A1-201ENST00000322507 NANOS2P60321 138 aaKnown RBP7.87□□□□□ -1.15
COL12A1-201ENST00000322507 DAZ1Q9NQZ3 744 aaKnown RBP7.87□□□□□ -1.15
COL12A1-201ENST00000322507 TEX22C9J3V5 150 aa7.87□□□□□ -1.15
COL12A1-201ENST00000322507 SHISA3A0PJX4 238 aa7.87□□□□□ -1.15
COL12A1-201ENST00000322507 GPR179Q6PRD1 2367 aa7.87□□□□□ -1.15
COL12A1-201ENST00000322507 BMPERQ8N8U9 685 aa7.87□□□□□ -1.15
COL12A1-201ENST00000322507 C9orf106Q8NAJ2 232 aa7.87□□□□□ -1.15
COL12A1-201ENST00000322507 IGKV1-9A0A0C4DH69 117 aa7.87□□□□□ -1.15
COL12A1-201ENST00000322507 PRSS57Q6UWY2 283 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 COL4A5P29400 1685 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 TRBV10-2A0A0K0K1G8 114 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 NDUFA12Q9UI09 145 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 TMEM256-PLSCR3K7ERE1 68 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 SH2D6Q7Z4S9 175 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 IGKV1D-13A0A0B4J2D9 117 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 USP17L23D6RBM5 183 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 SAP30O75446 220 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 IGKV1-13P0DP09 117 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 NTN3O00634 580 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-201ENST00000322507 VMO1Q7Z5L0 202 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 TMEM178BH3BS89 294 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 J3QQQ9 107 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 AMTNQ6UX39 209 aa7.86□□□□□ -1.15
COL12A1-201ENST00000322507 BLCAPP62952 87 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 COL4A1P02462 1669 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 GATA2P23769 480 aaPredicted RBP7.85□□□□□ -1.15
COL12A1-201ENST00000322507 C1orf159Q96HA4 380 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 SMIM2Q9BVW6 85 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 DOPEY1Q5JWR5 2465 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 RCHY1Q96PM5 261 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 HIVEP2P31629 2446 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 WDR87Q6ZQQ6 2873 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 SRRM4A7MD48 611 aaKnown RBP7.85□□□□□ -1.15
COL12A1-201ENST00000322507 IGHV1-3A0A0C4DH29 117 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.85□□□□□ -1.15
COL12A1-201ENST00000322507 IGHV1-18A0A0C4DH31 117 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms