RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 H3BUT2 72 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 CACNG7P62955 275 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 ZNF414Q96IQ9 312 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 PRRC2AP48634 2157 aaKnown RBP12.33□□□□□ -0.44
USH1C-202ENST00000318024 CCDC168Q8NDH2 2452 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 NDUFA3O95167 84 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 C5orf64Q2M2E5 130 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 LYZL1Q6UWQ5 148 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 COX8CQ7Z4L0 72 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 AMN1Q8IY45 258 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 LINC01356Q8N9X3 169 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 OR4X2Q8NGF9 303 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 PRELID3AQ96N28 172 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 C8orf49Q96NF6 230 aa12.33□□□□□ -0.44
USH1C-202ENST00000318024 ITPR2Q14571 2701 aa12.32□□□□□ -0.44
USH1C-202ENST00000318024 A0A0G2JLM5 398 aa12.32□□□□□ -0.44
USH1C-202ENST00000318024 K7EIM0 57 aa12.32□□□□□ -0.44
USH1C-202ENST00000318024 MRPL51Q4U2R6 128 aaKnown RBP12.32□□□□□ -0.44
USH1C-202ENST00000318024 ZNF575Q86XF7 245 aa12.32□□□□□ -0.44
USH1C-202ENST00000318024 ZNF491Q8N8L2 437 aa12.32□□□□□ -0.44
USH1C-202ENST00000318024 PIFOQ8TCI5 191 aa12.32□□□□□ -0.44
USH1C-202ENST00000318024 RASL11BQ9BPW5 248 aa12.32□□□□□ -0.44
USH1C-202ENST00000318024 CSPG4Q6UVK1 2322 aa12.32□□□□□ -0.44
USH1C-202ENST00000318024 FASNP49327 2511 aaKnown RBP12.31□□□□□ -0.44
USH1C-202ENST00000318024 LOC389332A0A1B0GUA5 103 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 HBDP02042 147 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 KLF17Q5JT82 389 aaPredicted RBP12.31□□□□□ -0.44
USH1C-202ENST00000318024 ORMDL3Q8N138 153 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 Q8N6K4 173 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 OR2K2Q8NGT1 345 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 CLUHP3Q96NS8 147 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 THYN1Q9P016 225 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 M0R3E3 92 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 PRB4P10163 310 aaPredicted RBP12.31□□□□□ -0.44
USH1C-202ENST00000318024 RIPPLY3P57055 190 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 EBI3Q14213 229 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 TMEM219Q86XT9 240 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 PCP2Q8IVA1 136 aa12.31□□□□□ -0.44
USH1C-202ENST00000318024 KRTAP1-3Q8IUG1 177 aa12.3□□□□□ -0.44
USH1C-202ENST00000318024 LRRC75A-AS1Q8N1F1 130 aa12.3□□□□□ -0.44
USH1C-202ENST00000318024 IFI27L1Q96BM0 104 aa12.3□□□□□ -0.44
USH1C-202ENST00000318024 NAA38Q9BRA0 125 aaKnown RBP12.3□□□□□ -0.44
USH1C-202ENST00000318024 HECTD1Q9ULT8 2610 aa12.3□□□□□ -0.44
USH1C-202ENST00000318024 A0A1W2PPM0 123 aa12.3□□□□□ -0.44
USH1C-202ENST00000318024 WI2-2373I1.2A0A1W2PRP0 233 aa12.3□□□□□ -0.44
USH1C-202ENST00000318024 LINC01546A6NGU7 62 aa12.3□□□□□ -0.44
USH1C-202ENST00000318024 K7EQM0 130 aa12.3□□□□□ -0.44
USH1C-202ENST00000318024 TEX15Q9BXT5 2789 aa12.3□□□□□ -0.44
USH1C-202ENST00000318024 S100A7P31151 101 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 FXYD7P58549 80 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 NDPQ00604 133 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 SH2D1AO60880 128 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 Q8N9W7 124 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 WFDC11Q8NEX6 87 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 OR5A1Q8NGJ0 315 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 AP1S3Q96PC3 154 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 SRSF8Q9BRL6 282 aaKnown RBP12.29□□□□□ -0.44
USH1C-202ENST00000318024 TPPP3Q9BW30 176 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 ZMAT4Q9H898 229 aa12.29□□□□□ -0.44
USH1C-202ENST00000318024 PDZD2O15018 2839 aa12.28□□□□□ -0.44
USH1C-202ENST00000318024 AKAP9Q99996 3911 aa12.28□□□□□ -0.44
USH1C-202ENST00000318024 SERTM2A0A1B0GWG4 89 aa12.28□□□□□ -0.44
USH1C-202ENST00000318024 NPYP01303 97 aa12.28□□□□□ -0.44
USH1C-202ENST00000318024 CT45A10P0DMU9 189 aa12.28□□□□□ -0.44
USH1C-202ENST00000318024 IGHV4-31P0DP07 118 aa12.28□□□□□ -0.44
USH1C-202ENST00000318024 BCL6BQ8N143 479 aaPredicted RBP12.28□□□□□ -0.44
USH1C-202ENST00000318024 SELENOKQ9Y6D0 94 aa12.28□□□□□ -0.44
USH1C-202ENST00000318024 UNC79Q9P2D8 2635 aa12.28□□□□□ -0.44
USH1C-202ENST00000318024 PDE6HQ13956 83 aa12.27□□□□□ -0.44
USH1C-202ENST00000318024 PRSS57Q6UWY2 283 aa12.27□□□□□ -0.44
USH1C-202ENST00000318024 ZNF562Q6V9R5 426 aa12.27□□□□□ -0.44
USH1C-202ENST00000318024 RNF125Q96EQ8 232 aa12.27□□□□□ -0.44
USH1C-202ENST00000318024 DKK2Q9UBU2 259 aa12.27□□□□□ -0.44
USH1C-202ENST00000318024 CREBBPQ92793 2442 aa12.27□□□□□ -0.44
USH1C-202ENST00000318024 TMEM189A5PLL7 270 aa12.27□□□□□ -0.45
USH1C-202ENST00000318024 LY6EQ16553 131 aa12.27□□□□□ -0.45
USH1C-202ENST00000318024 IGLC6P0CF74 106 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 GATA3P23771 443 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 TCTAP57738 103 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 ARPC1AQ92747 370 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 IGHV7-81A0A0B4J1V7 117 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 SMIM17P0DL12 118 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 RNF185Q96GF1 192 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 HIGD1BQ9P298 99 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 SPCS1Q9Y6A9 102 aa12.26□□□□□ -0.45
USH1C-202ENST00000318024 TMSB15BA0A087X1C1 80 aa12.25□□□□□ -0.45
USH1C-202ENST00000318024 LINC01548A6NM66 108 aa12.25□□□□□ -0.45
USH1C-202ENST00000318024 SMKR1H3BMG3 65 aa12.25□□□□□ -0.45
USH1C-202ENST00000318024 PHLDA1Q8WV24 401 aaPredicted RBP12.25□□□□□ -0.45
USH1C-202ENST00000318024 RAB37Q96AX2 223 aa12.25□□□□□ -0.45
USH1C-202ENST00000318024 ITPR3Q14573 2671 aa12.25□□□□□ -0.45
USH1C-202ENST00000318024 IGKV2D-26A0A0A0MRZ7 120 aa12.25□□□□□ -0.45
USH1C-202ENST00000318024 IL4P05112 153 aa12.25□□□□□ -0.45
USH1C-202ENST00000318024 EGR2P11161 476 aaPredicted RBP12.25□□□□□ -0.45
USH1C-202ENST00000318024 H3BUX3 64 aa12.24□□□□□ -0.45
USH1C-202ENST00000318024 FCGR2BP31994 310 aaPredicted RBP12.24□□□□□ -0.45
USH1C-202ENST00000318024 ODF1Q14990 250 aa12.24□□□□□ -0.45
USH1C-202ENST00000318024 C18orf15Q96N68 181 aa12.24□□□□□ -0.45
USH1C-202ENST00000318024 PRR25Q96S07 402 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms