RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 C8orf46Q8TAG6 207 aa7.39□□□□□ -1.23
CAPN3-201ENST00000318023 FAM167A-AS1Q96KT0 104 aa7.39□□□□□ -1.23
CAPN3-201ENST00000318023 PSPNO60542 156 aa7.39□□□□□ -1.23
CAPN3-201ENST00000318023 PSMB2P49721 201 aa7.39□□□□□ -1.23
CAPN3-201ENST00000318023 ZBTB34Q8NCN2 500 aa7.39□□□□□ -1.23
CAPN3-201ENST00000318023 PPP1R35Q8TAP8 253 aa7.39□□□□□ -1.23
CAPN3-201ENST00000318023 DSCAML1Q8TD84 2053 aa7.39□□□□□ -1.23
CAPN3-201ENST00000318023 LINC00596Q86U02 117 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 TRAV8-1A0A0A6YYK1 113 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 TRAV4A0A0B4J268 109 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 LOC107984156A0A0G2JMH3 177 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 D6R8Y8 96 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 IGHV3-48P01763 117 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 DUTP33316 252 aaKnown RBP7.38□□□□□ -1.23
CAPN3-201ENST00000318023 ARL17AQ8IVW1 177 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 HIST1H4GQ99525 98 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 PAXXQ9BUH6 204 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 H3BVH4 76 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 CRLF1O75462 422 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 DLX1P56177 255 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 ERVK-16P61578 105 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 GAGE2BQ13066 116 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 C3orf36Q3SXR2 165 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 GAGE2EQ4V326 116 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 GAGE2DQ9UEU5 116 aa7.38□□□□□ -1.23
CAPN3-201ENST00000318023 NBEAL1Q6ZS30 2694 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 EVI2AP22794 236 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 RPL39P5Q59GN2 51 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 TTC32Q5I0X7 151 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 DUX4L9Q6RFH8 374 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-201ENST00000318023 MAPKAPK5-AS1Q8N8E1 139 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 DUX5Q96PT3 197 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 DCTN5Q9BTE1 182 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 PRSS22Q9GZN4 317 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 ENY2Q9NPA8 101 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 HIGD1BQ9P298 99 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 SOX21Q9Y651 276 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-201ENST00000318023 RAI1Q7Z5J4 1906 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-201ENST00000318023 RHODO00212 210 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 PROP1O75360 226 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 MEIG1Q5JSS6 88 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 ZFP2Q6ZN57 461 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 PPDPFLQ8WWR9 84 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 FLYWCH2Q96CP2 140 aaKnown RBP7.37□□□□□ -1.23
CAPN3-201ENST00000318023 TIMD4Q96H15 378 aa7.37□□□□□ -1.23
CAPN3-201ENST00000318023 PGPA6NDG6 321 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 HBDP02042 147 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 IGHV4-31P0DP07 118 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 ATP6V0E2Q8NHE4 81 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
CAPN3-201ENST00000318023 WI2-2373I1.2A0A1W2PRP0 233 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 SMKR1H3BMG3 65 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 TNFRSF1AP19438 455 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 ZC2HC1BQ5TFG8 222 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 LYPD2Q6UXB3 125 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 Q6ZQT7 251 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 A0A1B0GUT8 65 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 C19orf71A6NCJ1 209 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 HAX1O00165 279 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 IFITM1P13164 125 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 MORN3Q6PF18 240 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-201ENST00000318023 DLX4Q92988 240 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-201ENST00000318023 FBXL15Q9H469 300 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 EPDR1Q9UM22 224 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 HHLA3Q9XRX5 114 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 CR1P17927 2039 aa7.36□□□□□ -1.23
CAPN3-201ENST00000318023 SNCGO76070 127 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 ZNF688P0C7X2 276 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 SLC25A16P16260 332 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 SRD5A1P18405 259 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 KRTAP1-1Q07627 177 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 MLST8Q9BVC4 326 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 SRRM4A7MD48 611 aaKnown RBP7.35□□□□□ -1.23
CAPN3-201ENST00000318023 COX7A2P2O60397 106 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 WDR86Q86TI4 376 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 TEN1Q86WV5 123 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 AMN1Q8IY45 258 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 SRSF12Q8WXF0 261 aaKnown RBP7.35□□□□□ -1.23
CAPN3-201ENST00000318023 RAB9BQ9NP90 201 aa7.35□□□□□ -1.23
CAPN3-201ENST00000318023 CSDC2Q9Y534 153 aaKnown RBP7.35□□□□□ -1.23
CAPN3-201ENST00000318023 TMEM30CPA0ZSE6 113 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 IQCF6A8MYZ5 107 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 PRSS1P07477 247 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 CCL13Q99616 98 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 MAP1LC3AQ9H492 121 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 ZFP36P26651 326 aaKnown RBP7.34□□□□□ -1.23
CAPN3-201ENST00000318023 PDPNQ86YL7 162 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 FXYD5Q96DB9 178 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 TMEM160Q9NX00 188 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 PLXNB1O43157 2135 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 CENPVL3A0A0U1RRI6 287 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 J3QT63 122 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 MRPL23Q16540 153 aaKnown RBP7.34□□□□□ -1.23
CAPN3-201ENST00000318023 CT83Q5H943 113 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 KLF17Q5JT82 389 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-201ENST00000318023 ANKRD29Q8N6D5 301 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 OR13A1Q8NGR1 328 aa7.34□□□□□ -1.23
CAPN3-201ENST00000318023 A0A096LNT2 108 aa7.33□□□□□ -1.24
CAPN3-201ENST00000318023 C15orf61A6NNL5 157 aa7.33□□□□□ -1.24
CAPN3-201ENST00000318023 IL4P05112 153 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms