RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 PQLC2Q6ZP29 291 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 Q6ZWC4 215 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 OR10J6PQ8NGY7 276 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 OR11H2Q8NH07 326 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 FAM213BQ8TBF2 198 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 AAMDCQ9H7C9 122 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 STAB2Q8WWQ8 2551 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 MAP1LC3B2A6NCE7 125 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 PGPA6NDG6 321 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 CXorf1O96002 111 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 SEC11BP0C7V7 166 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 NUTF2P61970 127 aaKnown RBP5.71□□□□□ -1.49
CDC42-201ENST00000315554 GNG5P63218 68 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 EIF5AP63241 154 aaKnown RBP5.71□□□□□ -1.49
CDC42-201ENST00000315554 KIR3DS1Q14943 382 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 CSNK1G2-AS1Q8NCQ2 148 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 OR4C5Q8NGB2 326 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 PACRGQ96M98 296 aaPredicted RBP5.71□□□□□ -1.49
CDC42-201ENST00000315554 RARRES2Q99969 163 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 VGLL1Q99990 258 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 MAP1LC3BQ9GZQ8 125 aa5.71□□□□□ -1.49
CDC42-201ENST00000315554 A0A0J9YWU9 116 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 CBY3A6NI87 242 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 A8MTW9 85 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 PRM2P04554 102 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 CT45A10P0DMU9 189 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 FAM74A1Q5RGS3 127 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 Q8TAT8 98 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 STOML3Q8TAV4 291 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 MRPL53Q96EL3 112 aaKnown RBP5.71□□□□□ -1.5
CDC42-201ENST00000315554 AGPAT4-IT1Q9H0P7 198 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 OTORQ9NRC9 128 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 TP53TG1Q9Y2A0 90 aa5.71□□□□□ -1.5
CDC42-201ENST00000315554 HUWE1Q7Z6Z7 4374 aaKnown RBP5.7□□□□□ -1.5
CDC42-201ENST00000315554 FBLL1A6NHQ2 334 aaKnown RBP5.7□□□□□ -1.5
CDC42-201ENST00000315554 NPIPB6E9PJ23 425 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 CRXO43186 299 aaPredicted RBP5.7□□□□□ -1.5
CDC42-201ENST00000315554 SLC25A5P05141 298 aaKnown RBP5.7□□□□□ -1.5
CDC42-201ENST00000315554 RBMY1A1P0DJD3 496 aaKnown RBP5.7□□□□□ -1.5
CDC42-201ENST00000315554 RBMY1CP0DJD4 496 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 CSN1S1P47710 185 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 RBMY1FQ15415 496 aaKnown RBP5.7□□□□□ -1.5
CDC42-201ENST00000315554 GOLT1AQ6ZVE7 132 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 C1orf158Q8N1D5 194 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.7□□□□□ -1.5
CDC42-201ENST00000315554 CMTM2Q8TAZ6 248 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 SFT2D1Q8WV19 159 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 SGK494Q96LW2 274 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 C1QTNF4Q9BXJ3 329 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 EDA2RQ9HAV5 297 aa5.7□□□□□ -1.5
CDC42-201ENST00000315554 YTHDF2Q9Y5A9 579 aaKnown RBP5.7□□□□□ -1.5
CDC42-201ENST00000315554 IGHV4-28A0A0C4DH34 117 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 GGTLC3B5MD39 225 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 UMAD1C9J7I0 102 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 DIRC3C9JPN6 131 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 INSP01308 110 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 TAS2R60P59551 318 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 SMIM15Q7Z3B0 74 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 LYPD1Q8N2G4 141 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 IGF2BP2-AS1Q96M15 143 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 WWC2-AS2Q96NR7 200 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 TMEM208Q9BTX3 173 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 CTDSP1Q9GZU7 261 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 TMEM167BQ9NRX6 74 aa5.69□□□□□ -1.5
CDC42-201ENST00000315554 TRAV26-1A0A087WT03 109 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 TRAV8-1A0A0A6YYK1 113 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 ZNF705GA8MUZ8 300 aaPredicted RBP5.68□□□□□ -1.5
CDC42-201ENST00000315554 LINC00587B1AMM8 73 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 HTN1P15515 57 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 LEPP41159 167 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 EMP1P54849 157 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 TMEM78Q5T7P6 136 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 PRR9Q5T870 116 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 GFI1BQ5VTD9 330 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 ZFAND6Q6FIF0 208 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 ALKAL2Q6UX46 152 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 Q6ZQT7 251 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 Q8NAQ8 132 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 OR2D3Q8NGH3 330 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 GOLT1BQ9Y3E0 138 aa5.68□□□□□ -1.5
CDC42-201ENST00000315554 TRAV12-3A0A0B4J271 114 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 A0A1B0GW15 77 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 PRSS29PA6NIE9 313 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 FAM74A7A6NL05 159 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 ZNF705EA8MWA4 302 aaPredicted RBP5.67□□□□□ -1.5
CDC42-201ENST00000315554 USP17L23D6RBM5 183 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 IFNA7P01567 189 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 AMBPP02760 352 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 RNASE4P34096 147 aaKnown RBP5.67□□□□□ -1.5
CDC42-201ENST00000315554 SULT1A2P50226 295 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 PPT1P50897 306 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 SEC61GP60059 68 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 CCL20P78556 96 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 BTN1A1Q13410 526 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 EIF5AL1Q6IS14 154 aaKnown RBP5.67□□□□□ -1.5
CDC42-201ENST00000315554 DPPA3Q6W0C5 159 aa5.67□□□□□ -1.5
CDC42-201ENST00000315554 ZNF705AQ6ZN79 300 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 2020.6 ms