RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 LEPP41159 167 aa13.7□□□□□ -0.22
CDK4-202ENST00000312990 OCC1Q8TAD7 63 aa13.7□□□□□ -0.22
CDK4-202ENST00000312990 F8W036 122 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 K7EN84 100 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 TSPOP30536 169 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 ZNF80P51504 273 aaPredicted RBP13.69□□□□□ -0.22
CDK4-202ENST00000312990 BTN1A1Q13410 526 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 SMIM12Q96EX1 92 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 SEC11CQ9BY50 192 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 GPX1P07203 203 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 NUTF2P61970 127 aaKnown RBP13.69□□□□□ -0.22
CDK4-202ENST00000312990 TMEM241Q24JQ0 296 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 SMUG1Q53HV7 270 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 C10orf91Q5T1B1 145 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 GFI1BQ5VTD9 330 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 Q6ZQT7 251 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 LINC01551Q86U37 167 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 NIPSNAP3BQ9BS92 247 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 XCL2Q9UBD3 114 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 NAT8Q9UHE5 227 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 LY96Q9Y6Y9 160 aa13.69□□□□□ -0.22
CDK4-202ENST00000312990 GCGP01275 180 aa13.68□□□□□ -0.22
CDK4-202ENST00000312990 CRIP1P50238 77 aa13.68□□□□□ -0.22
CDK4-202ENST00000312990 MORN3Q6PF18 240 aaPredicted RBP13.68□□□□□ -0.22
CDK4-202ENST00000312990 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
CDK4-202ENST00000312990 DNAH9Q9NYC9 4486 aa13.68□□□□□ -0.22
CDK4-202ENST00000312990 MGST1P10620 155 aaKnown RBP13.67□□□□□ -0.22
CDK4-202ENST00000312990 RNASE4P34096 147 aaKnown RBP13.67□□□□□ -0.22
CDK4-202ENST00000312990 OR5I1Q13606 314 aa13.67□□□□□ -0.22
CDK4-202ENST00000312990 CSTL1Q9H114 145 aa13.67□□□□□ -0.22
CDK4-202ENST00000312990 CA1P00915 261 aaPredicted RBP13.66□□□□□ -0.22
CDK4-202ENST00000312990 FRMD6-AS1P0C7T7 363 aa13.66□□□□□ -0.22
CDK4-202ENST00000312990 RBMY1A1P0DJD3 496 aaKnown RBP13.66□□□□□ -0.22
CDK4-202ENST00000312990 RBMY1CP0DJD4 496 aa13.66□□□□□ -0.22
CDK4-202ENST00000312990 RPL23P62829 140 aaKnown RBP13.66□□□□□ -0.22
CDK4-202ENST00000312990 RBMY1FQ15415 496 aaKnown RBP13.66□□□□□ -0.22
CDK4-202ENST00000312990 KIR2DL5BA0A0G2JN68 375 aa13.66□□□□□ -0.22
CDK4-202ENST00000312990 KIR2DL5BA0A0G2JPC4 375 aa13.66□□□□□ -0.22
CDK4-202ENST00000312990 C7orf71A4D174 169 aa13.66□□□□□ -0.22
CDK4-202ENST00000312990 Q6AWC8 147 aa13.66□□□□□ -0.22
CDK4-202ENST00000312990 PRR27Q6MZM9 219 aa13.66□□□□□ -0.22
CDK4-202ENST00000312990 KIR2DL5AQ8N109 375 aa13.66□□□□□ -0.22
CDK4-202ENST00000312990 KIR2DL5BQ8NHK3 375 aa13.66□□□□□ -0.22
CDK4-202ENST00000312990 CARHSP1Q9Y2V2 147 aaKnown RBP13.66□□□□□ -0.22
CDK4-202ENST00000312990 TRAV12-3A0A0B4J271 114 aa13.65□□□□□ -0.22
CDK4-202ENST00000312990 KRBOX1C9JBD0 128 aa13.65□□□□□ -0.22
CDK4-202ENST00000312990 ZNF324O75467 553 aaPredicted RBP13.65□□□□□ -0.22
CDK4-202ENST00000312990 AMBPP02760 352 aa13.65□□□□□ -0.22
CDK4-202ENST00000312990 CSNK1G2-AS1Q8NCQ2 148 aa13.65□□□□□ -0.22
CDK4-202ENST00000312990 TENM3Q9P273 2699 aa13.65□□□□□ -0.23
CDK4-202ENST00000312990 HUWE1Q7Z6Z7 4374 aaKnown RBP13.64□□□□□ -0.23
CDK4-202ENST00000312990 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
CDK4-202ENST00000312990 APOC4P55056 127 aa13.64□□□□□ -0.23
CDK4-202ENST00000312990 ADIRFQ15847 76 aa13.64□□□□□ -0.23
CDK4-202ENST00000312990 INSP01308 110 aa13.63□□□□□ -0.23
CDK4-202ENST00000312990 FAM162BQ5T6X4 162 aa13.63□□□□□ -0.23
CDK4-202ENST00000312990 C1QTNF4Q9BXJ3 329 aa13.63□□□□□ -0.23
CDK4-202ENST00000312990 C19orf71A6NCJ1 209 aa13.63□□□□□ -0.23
CDK4-202ENST00000312990 SH2D1AO60880 128 aa13.63□□□□□ -0.23
CDK4-202ENST00000312990 ISOC2Q96AB3 205 aa13.63□□□□□ -0.23
CDK4-202ENST00000312990 C11orf21Q9P2W6 132 aa13.63□□□□□ -0.23
CDK4-202ENST00000312990 TRAV21A0A0B4J279 112 aa13.62□□□□□ -0.23
CDK4-202ENST00000312990 C1orf158Q8N1D5 194 aa13.62□□□□□ -0.23
CDK4-202ENST00000312990 RNASE7Q9H1E1 156 aaKnown RBP13.62□□□□□ -0.23
CDK4-202ENST00000312990 COL7A1Q02388 2944 aa13.61□□□□□ -0.23
CDK4-202ENST00000312990 FABP5P3A8MUU1 101 aa13.61□□□□□ -0.23
CDK4-202ENST00000312990 PNRC1Q12796 327 aaPredicted RBP13.61□□□□□ -0.23
CDK4-202ENST00000312990 BIN3Q9NQY0 253 aa13.61□□□□□ -0.23
CDK4-202ENST00000312990 DEFB121Q5J5C9 76 aa13.6□□□□□ -0.23
CDK4-202ENST00000312990 C20orf144Q9BQM9 153 aa13.6□□□□□ -0.23
CDK4-202ENST00000312990 APOC3P02656 99 aa13.59□□□□□ -0.23
CDK4-202ENST00000312990 DEFB135Q30KP9 77 aa13.59□□□□□ -0.23
CDK4-202ENST00000312990 NUDT10Q8NFP7 164 aa13.59□□□□□ -0.23
CDK4-202ENST00000312990 NUDT11Q96G61 164 aa13.59□□□□□ -0.23
CDK4-202ENST00000312990 UBE2CO00762 179 aa13.59□□□□□ -0.23
CDK4-202ENST00000312990 MUC21Q5SSG8 566 aa13.59□□□□□ -0.23
CDK4-202ENST00000312990 IBA57Q5T440 356 aaKnown RBP13.59□□□□□ -0.23
CDK4-202ENST00000312990 ZNF705AQ6ZN79 300 aaPredicted RBP13.59□□□□□ -0.23
CDK4-202ENST00000312990 FAM231DQ6ZW35 169 aa13.59□□□□□ -0.23
CDK4-202ENST00000312990 IGKV3D-20A0A0C4DH25 116 aa13.58□□□□□ -0.24
CDK4-202ENST00000312990 ERVFC1-1P60608 527 aa13.58□□□□□ -0.24
CDK4-202ENST00000312990 RPL19P84098 196 aaKnown RBP13.58□□□□□ -0.24
CDK4-202ENST00000312990 ZNF575Q86XF7 245 aa13.58□□□□□ -0.24
CDK4-202ENST00000312990 MRAPQ8TCY5 172 aa13.58□□□□□ -0.24
CDK4-202ENST00000312990 SFRP2Q96HF1 295 aa13.58□□□□□ -0.24
CDK4-202ENST00000312990 NAGKQ9UJ70 344 aa13.58□□□□□ -0.24
CDK4-202ENST00000312990 MUC4Q99102 2169 aa13.58□□□□□ -0.24
CDK4-202ENST00000312990 H7BYZ3 331 aa13.57□□□□□ -0.24
CDK4-202ENST00000312990 M0R036 132 aa13.57□□□□□ -0.24
CDK4-202ENST00000312990 PRM2P04554 102 aa13.57□□□□□ -0.24
CDK4-202ENST00000312990 LINC01559Q495D7 138 aa13.57□□□□□ -0.24
CDK4-202ENST00000312990 Q6ZWC4 215 aa13.57□□□□□ -0.24
CDK4-202ENST00000312990 TMEM256Q8N2U0 113 aa13.57□□□□□ -0.24
CDK4-202ENST00000312990 DAZAP1Q96EP5 407 aaKnown RBP13.57□□□□□ -0.24
CDK4-202ENST00000312990 IGHV3OR16-12A0A075B7B8 117 aa13.56□□□□□ -0.24
CDK4-202ENST00000312990 P01737 135 aa13.56□□□□□ -0.24
CDK4-202ENST00000312990 DEFA6Q01524 100 aa13.56□□□□□ -0.24
CDK4-202ENST00000312990 ANXA2RQ3ZCQ2 193 aa13.56□□□□□ -0.24
CDK4-202ENST00000312990 SBSPONQ8IVN8 264 aa13.56□□□□□ -0.24
CDK4-202ENST00000312990 LINC01587Q99440 93 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms