RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ADAMTS9Q9P2N4 1935 aa6.55□□□□□ -1.36
VPS41-202ENST00000310301 TRBV7-1A0A0A6YYK4 115 aa6.55□□□□□ -1.36
VPS41-202ENST00000310301 ASPHD1Q5U4P2 390 aa6.55□□□□□ -1.36
VPS41-202ENST00000310301 DEFB125Q8N687 156 aa6.55□□□□□ -1.36
VPS41-202ENST00000310301 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
VPS41-202ENST00000310301 PFN2P35080 140 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 PAX9P55771 341 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 KLRD1Q13241 179 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 KIF26BQ2KJY2 2108 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 TMEM219Q86XT9 240 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 MAPK1IP1LQ8NDC0 245 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 SIGLEC9Q9Y336 463 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 PLXNA2O75051 1894 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 H3BUX3 64 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 CRLF1O75462 422 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 NDUFC2O95298 119 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 FAM231DQ6ZW35 169 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 DSCR8Q96T75 97 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 NDUFA12Q9UI09 145 aa6.54□□□□□ -1.36
VPS41-202ENST00000310301 NDUFS7O75251 213 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 NPYP01303 97 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 PDE6HQ13956 83 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 TRAV25A0A0B4J276 109 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 I3L3M4 83 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 RNF5Q99942 180 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 DENND4AQ7Z401 1863 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 F8VRH5 84 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 IGLV1-44P01699 117 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 GRNP28799 593 aaKnown RBP6.53□□□□□ -1.36
VPS41-202ENST00000310301 ALPK2Q86TB3 2170 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 ZGRF1Q86YA3 2104 aa6.53□□□□□ -1.36
VPS41-202ENST00000310301 IGHV1-69DA0A0B4J2H0 117 aa6.52□□□□□ -1.36
VPS41-202ENST00000310301 IGHV1-69P01742 117 aa6.52□□□□□ -1.36
VPS41-202ENST00000310301 HS3ST6Q96QI5 342 aa6.52□□□□□ -1.36
VPS41-202ENST00000310301 IGKV1-16P04430 117 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 UBE2E1P51965 193 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 RNF166Q96A37 237 aaPredicted RBP6.52□□□□□ -1.37
VPS41-202ENST00000310301 C5orf64Q2M2E5 130 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 Q8TCH9 128 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 C10orf105Q8TEF2 133 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 PTPRSQ13332 1948 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 J3KT08 172 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 J3QQQ9 107 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 C11orf44Q8N8P7 122 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 UBE2E2Q96LR5 201 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 SHISA9B4DS77 424 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 BUB1B-PAK6H3BSN5 160 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 HOXD3P31249 432 aaPredicted RBP6.52□□□□□ -1.37
VPS41-202ENST00000310301 GAFA1Q96PS6 74 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 TMEM243Q9BU79 118 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 PCNX1Q96RV3 2341 aa6.52□□□□□ -1.37
VPS41-202ENST00000310301 AKAP6Q13023 2319 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 IGKV1-6A0A0C4DH72 117 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 KNCNA6PVL3 124 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 LOXL1Q08397 574 aaPredicted RBP6.51□□□□□ -1.37
VPS41-202ENST00000310301 FOXL2NBQ6ZUU3 175 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 SCRT2Q9NQ03 307 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 CFC1BP0CG36 223 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 CFC1P0CG37 223 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 GATA4P43694 442 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 FREM3P0C091 2139 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 TRAV13-2A0A0B4J235 113 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 C10orf142B7Z368 130 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 RPL35AP18077 110 aaKnown RBP6.51□□□□□ -1.37
VPS41-202ENST00000310301 POU2AF1Q16633 256 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 BRD3OSQ6XYD6 125 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 DOCK11Q5JSL3 2073 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 TRBV19A0A075B6N1 114 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 PRSS29PA6NIE9 313 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 IGLL5B9A064 214 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 K7EN84 100 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 LY6HO94772 140 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 IGLC1P0CG04 106 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 LRRK1Q38SD2 2015 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 IGKV1D-17A0A075B6S4 117 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 A0A1W2PPI3 338 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 SDHAF1A6NFY7 115 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 BAALC-AS2P0C853 105 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 CFPP27918 469 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 RHPN1-AS1Q9BWJ2 59 aa6.51□□□□□ -1.37
VPS41-202ENST00000310301 IGF2RP11717 2491 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 KLF5Q13887 457 aaPredicted RBP6.5□□□□□ -1.37
VPS41-202ENST00000310301 ZNF747Q9BV97 191 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 DENND4CQ5VZ89 1909 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 CHD8Q9HCK8 2581 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 USF3Q68DE3 2245 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 IGLV3-9A0A075B6K5 115 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 IGHV3-16A0A0C4DH30 117 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 NXPH4O95158 308 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
VPS41-202ENST00000310301 TDRG1Q3Y452 100 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 TMEM14BQ9NUH8 114 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 ACYP1P07311 99 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 ZC2HC1AQ96GY0 325 aa6.5□□□□□ -1.37
VPS41-202ENST00000310301 TRAV26-1A0A087WT03 109 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 FOXI2Q6ZQN5 318 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 C8orf86Q6ZUL3 223 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms