RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 ATP5G1P05496 136 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 RPL35AP18077 110 aaKnown RBP2.55□□□□□ -2
CLOCK-201ENST00000309964 ATP5G3P48201 142 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 Q0VG73 95 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 ZFP2Q6ZN57 461 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 ZNF329Q86UD4 541 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 C1orf159Q96HA4 380 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 CSTL1Q9H114 145 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 IGKV1-12A0A0C4DH73 117 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 TRBV10-1A0A0K0K1A3 114 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 RNF222A6NCQ9 220 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 IGKV1D-12P01611 117 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 RNF224P0DH78 156 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 DSCR8Q96T75 97 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 GPHA2Q96T91 129 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 PRORYQ9H606 182 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 FAM215AQ9Y5M1 114 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 LY6G6EA0A0G2JKS1 128 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 CD300EQ496F6 205 aaPredicted RBP2.55□□□□□ -2
CLOCK-201ENST00000309964 ORAOV1Q8WV07 137 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 LINC00479Q96M42 142 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 U3KQA8 63 aa2.55□□□□□ -2
CLOCK-201ENST00000309964 VWC2LB2RUY7 222 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 IGHG2P01859 326 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 CLPSP04118 112 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 SAMD5Q5TGI4 173 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 C10orf105Q8TEF2 133 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 UBL5Q9BZL1 73 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 A8MWP6 167 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 NDUFA3O95167 84 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 KLF5Q13887 457 aaPredicted RBP2.54□□□□□ -2
CLOCK-201ENST00000309964 OCC1Q8TAD7 63 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 C4orf3Q8WVX3 66 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 GLMPQ8WWB7 406 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 ZNF479Q96JC4 524 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 PRR25Q96S07 402 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 ICOSQ9Y6W8 199 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 MMP23AO75900 390 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 GP9P14770 177 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 QRFPP83859 136 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 LINC01551Q86U37 167 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 RPP25LQ8N5L8 163 aaKnown RBP2.54□□□□□ -2
CLOCK-201ENST00000309964 CITED2Q99967 270 aaPredicted RBP2.54□□□□□ -2
CLOCK-201ENST00000309964 TRBV19A0A075B6N1 114 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 CENPVL3A0A0U1RRI6 287 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 D6R8Y8 96 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 IGKV1-27A0A075B6S5 117 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 SOCS3O14543 225 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 FAM120AOSQ5T036 256 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 C5orf24Q7Z6I8 188 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 EXOC3-AS1Q8N2X6 119 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 SHISA9B4DS77 424 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 ANGP03950 147 aaKnown RBP2.54□□□□□ -2
CLOCK-201ENST00000309964 LOXP28300 417 aaPredicted RBP2.54□□□□□ -2
CLOCK-201ENST00000309964 FUSP35637 526 aaKnown RBP eCLIP2.54□□□□□ -2
CLOCK-201ENST00000309964 ADORA2A-AS1P86434 159 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 TRAV2A0A0B4J234 112 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 LINC00473A8K010 186 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 IGLV3-1P01715 115 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 SNRPCP09234 159 aaKnown RBP2.54□□□□□ -2
CLOCK-201ENST00000309964 PYYP10082 97 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 PAX9P55771 341 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 MEGF9Q9H1U4 602 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 UTRNP46939 3433 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 MED14OSP0DP75 135 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 LYPD2Q6UXB3 125 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 MUC7Q8TAX7 377 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 RNF138Q8WVD3 245 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 ODF3Q96PU9 254 aa2.54□□□□□ -2
CLOCK-201ENST00000309964 TRAV8-3A0A0A6YYJ7 113 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 H7C423 109 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 SSBP4Q9BWG4 385 aaPredicted RBP2.53□□□□□ -2
CLOCK-201ENST00000309964 GATD1Q8NB37 220 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 NUP35Q8NFH5 326 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 LSM4Q9Y4Z0 139 aaKnown RBP2.53□□□□□ -2
CLOCK-201ENST00000309964 H3BRN7 92 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 SH2D1AO60880 128 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 IGKV1-5P01602 117 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 HILS1P60008 231 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 UBE2BP63146 152 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 HS3ST6Q96QI5 342 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 TRBV7-3A0A075B6L6 115 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 TRAV8-2A0A0B4J237 113 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 SDHAF1A6NFY7 115 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 F8VRH5 84 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 TNFRSF13BO14836 293 aaPredicted RBP2.53□□□□□ -2
CLOCK-201ENST00000309964 PDE6GP18545 87 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 C17orf58Q2M2W7 97 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 XCL2Q9UBD3 114 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 BPTFQ12830 3046 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 LYRM9A8MSI8 78 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 CXCL1P09341 107 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 ESDP10768 282 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 HOXB4P17483 251 aaPredicted RBP2.53□□□□□ -2
CLOCK-201ENST00000309964 SPINK13Q1W4C9 94 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 TMEM263Q8WUH6 116 aaKnown RBP2.53□□□□□ -2
CLOCK-201ENST00000309964 IGF2BP2-AS1Q96M15 143 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 S4R3C0 116 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 NDPQ00604 133 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 GAGE13Q4V321 117 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms