RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 RNF5Q99942 180 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 F8W1H4 67 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 ATP5LO75964 103 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 CCDC144NLQ6NUI1 221 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 HIST1H4GQ99525 98 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 IGHV3OR16-13A0A075B7E8 117 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 IGHV3-74A0A0B4J1X5 117 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 VSTM5A8MXK1 200 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 LY6HO94772 140 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 CTSGP08311 255 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 ATP5G2Q06055 141 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 UFC1Q9Y3C8 167 aa11.16□□□□□ -0.62
LRRFIP1-203ENST00000308482 ASH1LQ9NR48 2969 aaKnown RBP11.15□□□□□ -0.62
LRRFIP1-203ENST00000308482 C5orf64Q2M2E5 130 aa11.15□□□□□ -0.62
LRRFIP1-203ENST00000308482 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.63
LRRFIP1-203ENST00000308482 DEFB123Q8N688 67 aa11.15□□□□□ -0.63
LRRFIP1-203ENST00000308482 SPOCK3Q9BQ16 436 aa11.15□□□□□ -0.63
LRRFIP1-203ENST00000308482 SMPXQ9UHP9 88 aa11.15□□□□□ -0.63
LRRFIP1-203ENST00000308482 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
LRRFIP1-203ENST00000308482 MYOZ3Q8TDC0 251 aa11.14□□□□□ -0.63
LRRFIP1-203ENST00000308482 KLK15Q9H2R5 256 aa11.14□□□□□ -0.63
LRRFIP1-203ENST00000308482 PIP4P1Q86T03 277 aa11.14□□□□□ -0.63
LRRFIP1-203ENST00000308482 NRACQ8N912 160 aa11.14□□□□□ -0.63
LRRFIP1-203ENST00000308482 DPM3Q9P2X0 92 aa11.14□□□□□ -0.63
LRRFIP1-203ENST00000308482 SPRY2O43597 315 aa11.13□□□□□ -0.63
LRRFIP1-203ENST00000308482 LAGE3Q14657 143 aa11.13□□□□□ -0.63
LRRFIP1-203ENST00000308482 TTC9CQ8N5M4 171 aa11.13□□□□□ -0.63
LRRFIP1-203ENST00000308482 SRSF1Q07955 248 aaKnown RBP eCLIP11.13□□□□□ -0.63
LRRFIP1-203ENST00000308482 GAGE13Q4V321 117 aa11.13□□□□□ -0.63
LRRFIP1-203ENST00000308482 PSMG4Q5JS54 123 aa11.13□□□□□ -0.63
LRRFIP1-203ENST00000308482 NPBQ8NG41 125 aa11.13□□□□□ -0.63
LRRFIP1-203ENST00000308482 PRO0461Q9UI25 63 aa11.13□□□□□ -0.63
LRRFIP1-203ENST00000308482 SPTBN2O15020 2390 aa11.13□□□□□ -0.63
LRRFIP1-203ENST00000308482 A0A087WX48 190 aa11.12□□□□□ -0.63
LRRFIP1-203ENST00000308482 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
LRRFIP1-203ENST00000308482 RRN3P1Q2M238 152 aa11.12□□□□□ -0.63
LRRFIP1-203ENST00000308482 SFTA2Q6UW10 78 aa11.12□□□□□ -0.63
LRRFIP1-203ENST00000308482 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
LRRFIP1-203ENST00000308482 SPATA25Q9BR10 227 aa11.12□□□□□ -0.63
LRRFIP1-203ENST00000308482 CYSLTR1Q9Y271 337 aa11.12□□□□□ -0.63
LRRFIP1-203ENST00000308482 TRBV7-3A0A075B6L6 115 aa11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 SRSF2Q01130 221 aaKnown RBP11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 ZNF48Q96MX3 618 aaPredicted RBP11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 AGPAT4-IT1Q9H0P7 198 aa11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 TTC28Q96AY4 2481 aa11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 J3QR89 54 aa11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 SCGB1A1P11684 91 aa11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 WFDC12Q8WWY7 111 aa11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 IGHV7-4-1A0A0J9YVY3 117 aa11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 C20orf78Q9BR46 151 aa11.11□□□□□ -0.63
LRRFIP1-203ENST00000308482 HLA-DRB4P13762 266 aa11.1□□□□□ -0.63
LRRFIP1-203ENST00000308482 Q5PR19 223 aa11.1□□□□□ -0.63
LRRFIP1-203ENST00000308482 HLA-DRB4X5D2U9 266 aa11.1□□□□□ -0.63
LRRFIP1-203ENST00000308482 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.1□□□□□ -0.63
LRRFIP1-203ENST00000308482 A0A1B0GWB2 263 aa11.1□□□□□ -0.63
LRRFIP1-203ENST00000308482 ZNF672Q499Z4 452 aaPredicted RBP11.1□□□□□ -0.63
LRRFIP1-203ENST00000308482 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
LRRFIP1-203ENST00000308482 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.1□□□□□ -0.63
LRRFIP1-203ENST00000308482 TAL2Q16559 108 aa11.09□□□□□ -0.63
LRRFIP1-203ENST00000308482 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
LRRFIP1-203ENST00000308482 B9A039 149 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 NDUFS8O00217 210 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 ZFHX3Q15911 3703 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 MYMXA0A1B0GTQ4 84 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 A0A1B0GV72 72 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 J3KRW8 73 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 BUB3O43684 328 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 PLNP26678 52 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 RAB9AP51151 201 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 OR11H6Q8NGC7 330 aa11.08□□□□□ -0.64
LRRFIP1-203ENST00000308482 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 F8VRH5 84 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 H3BVH4 76 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 OR11H2Q8NH07 326 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 LINC01560Q8TB33 94 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 ZNF502Q8TBZ5 544 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 PGPEP1Q9NXJ5 209 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 ANKHD1Q8IWZ3 2542 aaKnown RBP11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 CLEC3BP05452 202 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 C15orf32Q32M92 178 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 PRR30Q53SZ7 412 aaPredicted RBP11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 LY6G5BQ8NDX9 201 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 MSRB2Q9Y3D2 182 aa11.07□□□□□ -0.64
LRRFIP1-203ENST00000308482 APOMO95445 188 aa11.06□□□□□ -0.64
LRRFIP1-203ENST00000308482 LGALS1P09382 135 aaKnown RBP11.06□□□□□ -0.64
LRRFIP1-203ENST00000308482 SMCPP49901 116 aaPredicted RBP11.06□□□□□ -0.64
LRRFIP1-203ENST00000308482 ZFAND3Q9H8U3 227 aa11.06□□□□□ -0.64
LRRFIP1-203ENST00000308482 RIF1Q5UIP0 2472 aaKnown RBP11.06□□□□□ -0.64
LRRFIP1-203ENST00000308482 H7C1H1 209 aa11.06□□□□□ -0.64
LRRFIP1-203ENST00000308482 CD3EP07766 207 aa11.06□□□□□ -0.64
LRRFIP1-203ENST00000308482 IGHV7-81A0A0B4J1V7 117 aa11.05□□□□□ -0.64
LRRFIP1-203ENST00000308482 TRAV8-2A0A0B4J237 113 aa11.05□□□□□ -0.64
LRRFIP1-203ENST00000308482 IGF1P05019 195 aa11.05□□□□□ -0.64
LRRFIP1-203ENST00000308482 CKS1BP61024 79 aa11.05□□□□□ -0.64
LRRFIP1-203ENST00000308482 PRR9Q5T870 116 aa11.05□□□□□ -0.64
LRRFIP1-203ENST00000308482 DEFB104AQ8WTQ1 72 aa11.05□□□□□ -0.64
LRRFIP1-203ENST00000308482 SCGB3A1Q96QR1 104 aa11.05□□□□□ -0.64
LRRFIP1-203ENST00000308482 PRSS47A8MTI9 375 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 1102.2 ms