RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 PSG8Q9UQ74 426 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 ITPR1Q14643 2758 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 TRBV20-1A0A075B6N2 111 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 A8MWV9 139 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 C15orf65H3BRN8 121 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 C17orf58Q2M2W7 97 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 LYZL1Q6UWQ5 148 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 Q86TA4 180 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 OSR1Q8TAX0 266 aaPredicted RBP8.62□□□□□ -1.03
LSM3-201ENST00000306024 TMEM262E9PQX1 116 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 FLNBO75369 2602 aaKnown RBP8.61□□□□□ -1.03
LSM3-201ENST00000306024 DSCR9P59020 149 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 VMA21Q3ZAQ7 101 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 KLK15Q9H2R5 256 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 HECTD1Q9ULT8 2610 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 EVI2AP22794 236 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 KLRD1Q13241 179 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 RRN3P1Q2M238 152 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 HIF1ANQ9NWT6 349 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 ANKRD17O75179 2603 aaKnown RBP8.61□□□□□ -1.03
LSM3-201ENST00000306024 H7C2G1 150 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 SSBP2P81877 361 aaPredicted RBP8.61□□□□□ -1.03
LSM3-201ENST00000306024 MAPK1IP1LQ8NDC0 245 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 C1QTNF4Q9BXJ3 329 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 C7orf69Q9H7B7 122 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 ZFHX4Q86UP3 3567 aa8.61□□□□□ -1.03
LSM3-201ENST00000306024 ATP5LO75964 103 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 ZNF134P52741 427 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 PPDPFLQ8WWR9 84 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 MRPL20Q9BYC9 149 aaKnown RBP8.6□□□□□ -1.03
LSM3-201ENST00000306024 OTORQ9NRC9 128 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 NOTCH3Q9UM47 2321 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 TRAV40A0A0B4J280 105 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 NPIPB5A8MRT5 1133 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 PROP1O75360 226 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 IGKV1-16P04430 117 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 EIF4EBP1Q13541 118 aaPredicted RBP8.6□□□□□ -1.03
LSM3-201ENST00000306024 C5orf64Q2M2E5 130 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 Q6ZUT4 128 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 DPM3Q9P2X0 92 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 E9PLD3 99 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 GAGE7O76087 117 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 GAGE12FP0CL80 117 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 GAGE12GP0CL81 117 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 GAGE12IP0CL82 117 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 GAGE4Q13068 117 aa8.6□□□□□ -1.03
LSM3-201ENST00000306024 RPL7P18124 248 aaKnown RBP8.59□□□□□ -1.03
LSM3-201ENST00000306024 RASL11BQ9BPW5 248 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 ERG28Q9UKR5 140 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 TRBV7-9A0A0J9YWB2 115 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 GATA3P23771 443 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.59□□□□□ -1.03
LSM3-201ENST00000306024 CITED1Q99966 193 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 IGHV4-30-2A0A087WSY4 118 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 FAM104BQ5XKR9 115 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 ZNF562Q6V9R5 426 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 PTH2Q96A98 100 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 TANC2Q9HCD6 1990 aa8.59□□□□□ -1.03
LSM3-201ENST00000306024 IGHV4-61A0A0C4DH41 118 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 LINC01549A6NIU2 74 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 HIGD1BQ9P298 99 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 NPYP01303 97 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 SLC25A16P16260 332 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 LOXL3P58215 753 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 MRPL51Q4U2R6 128 aaKnown RBP8.58□□□□□ -1.04
LSM3-201ENST00000306024 SHISA2Q6UWI4 295 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 PATE2Q6UY27 113 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 VMO1Q7Z5L0 202 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 TMEM158Q8WZ71 300 aa8.58□□□□□ -1.04
LSM3-201ENST00000306024 PRSS22Q9GZN4 317 aa8.57□□□□□ -1.04
LSM3-201ENST00000306024 B4DSR2 109 aa8.57□□□□□ -1.04
LSM3-201ENST00000306024 OR4C13Q8NGP0 309 aa8.57□□□□□ -1.04
LSM3-201ENST00000306024 NAV3Q8IVL0 2385 aa8.57□□□□□ -1.04
LSM3-201ENST00000306024 C19orf71A6NCJ1 209 aa8.57□□□□□ -1.04
LSM3-201ENST00000306024 C10orf105Q8TEF2 133 aa8.57□□□□□ -1.04
LSM3-201ENST00000306024 NXT2Q9NPJ8 142 aaKnown RBP8.57□□□□□ -1.04
LSM3-201ENST00000306024 M0R1W7 72 aa8.56□□□□□ -1.04
LSM3-201ENST00000306024 XGP55808 180 aa8.56□□□□□ -1.04
LSM3-201ENST00000306024 PLXNB1O43157 2135 aa8.56□□□□□ -1.04
LSM3-201ENST00000306024 DEFB113Q30KQ7 82 aa8.56□□□□□ -1.04
LSM3-201ENST00000306024 Q96MF0 132 aa8.56□□□□□ -1.04
LSM3-201ENST00000306024 MRPL35Q9NZE8 188 aaKnown RBP8.56□□□□□ -1.04
LSM3-201ENST00000306024 COL12A1Q99715 3063 aa8.56□□□□□ -1.04
LSM3-201ENST00000306024 EMP1P54849 157 aa8.56□□□□□ -1.04
LSM3-201ENST00000306024 C1orf122Q6ZSJ8 110 aa8.56□□□□□ -1.04
LSM3-201ENST00000306024 KLF12Q9Y4X4 402 aa8.56□□□□□ -1.04
LSM3-201ENST00000306024 ZNF688P0C7X2 276 aa8.55□□□□□ -1.04
LSM3-201ENST00000306024 RPL27AP46776 148 aaKnown RBP8.55□□□□□ -1.04
LSM3-201ENST00000306024 NBEAQ8NFP9 2946 aa8.55□□□□□ -1.04
LSM3-201ENST00000306024 SRRM4A7MD48 611 aaKnown RBP8.55□□□□□ -1.04
LSM3-201ENST00000306024 M0R3E3 92 aa8.55□□□□□ -1.04
LSM3-201ENST00000306024 MSMBP08118 114 aa8.55□□□□□ -1.04
LSM3-201ENST00000306024 MLST8Q9BVC4 326 aa8.55□□□□□ -1.04
LSM3-201ENST00000306024 FBXL15Q9H469 300 aa8.55□□□□□ -1.04
LSM3-201ENST00000306024 ACANP16112 2415 aa8.55□□□□□ -1.04
LSM3-201ENST00000306024 ZNF815PA8K554 130 aa8.55□□□□□ -1.04
LSM3-201ENST00000306024 OVOL3O00110 214 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms