RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 C2orf70A6NJV1 201 aa10.48□□□□□ -0.73
DDX54-201ENST00000306014 LINC00322Q6ZN03 302 aaPredicted RBP10.48□□□□□ -0.73
DDX54-201ENST00000306014 PRRC2CQ9Y520 2896 aaKnown RBP10.48□□□□□ -0.73
DDX54-201ENST00000306014 TRBV7-1A0A0A6YYK4 115 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 I3L2K1 104 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 DTX2Q86UW9 622 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 PGPEP1Q9NXJ5 209 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 IGKV1D-37A0A075B6S9 117 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 K7EIM0 57 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 TP73-AS1Q9UF72 201 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 K7ERJ3 54 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 Q8N8P6 123 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 K7EP34 96 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 Q8N7P7 452 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 LINC00477Q96M19 166 aa10.47□□□□□ -0.73
DDX54-201ENST00000306014 EFNA4P52798 201 aa10.46□□□□□ -0.73
DDX54-201ENST00000306014 CIRBPQ14011 172 aaKnown RBP10.46□□□□□ -0.73
DDX54-201ENST00000306014 RNF114Q9Y508 228 aa10.46□□□□□ -0.73
DDX54-201ENST00000306014 NPFFO15130 113 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 MSRB1Q9NZV6 116 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 TRAV12-3A0A0B4J271 114 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 SHISA9B4DS77 424 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 CRXO43186 299 aaPredicted RBP10.46□□□□□ -0.74
DDX54-201ENST00000306014 FCN3O75636 299 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 ZNF688P0C7X2 276 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 GATA1P15976 413 aaPredicted RBP10.46□□□□□ -0.74
DDX54-201ENST00000306014 MEIG1Q5JSS6 88 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 MRAP2Q96G30 205 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 RAX2Q96IS3 184 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 BPESC1Q9GZL8 116 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 SCRT2Q9NQ03 307 aa10.46□□□□□ -0.74
DDX54-201ENST00000306014 A0A087WWL8 130 aa10.45□□□□□ -0.74
DDX54-201ENST00000306014 TRAV8-2A0A0B4J237 113 aa10.45□□□□□ -0.74
DDX54-201ENST00000306014 SUMO2P61956 95 aaKnown RBP10.45□□□□□ -0.74
DDX54-201ENST00000306014 ETDBQ3ZM63 59 aa10.45□□□□□ -0.74
DDX54-201ENST00000306014 A0A1W2PPM0 123 aa10.45□□□□□ -0.74
DDX54-201ENST00000306014 FAM110DQ8TAY7 271 aaPredicted RBP10.45□□□□□ -0.74
DDX54-201ENST00000306014 DUX3Q96PT4 197 aa10.45□□□□□ -0.74
DDX54-201ENST00000306014 DYNAPQ8N1N2 210 aa10.45□□□□□ -0.74
DDX54-201ENST00000306014 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 C8orf86Q6ZUL3 223 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 CSPG4Q6UVK1 2322 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 IGKV3D-20A0A0C4DH25 116 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 H3BUX3 64 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 TAX1BP3O14907 124 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 SNCGO76070 127 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 IGHV4-39P01824 125 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 CDKN1BP46527 198 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 C19orf54Q5BKX5 351 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 C2orf66Q6UXQ4 117 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 ANKRD11Q6UB99 2663 aaPredicted RBP10.44□□□□□ -0.74
DDX54-201ENST00000306014 IGKV3OR2-268A0A0C4DH90 116 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 A8MWV9 139 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 SPOCK3Q9BQ16 436 aa10.44□□□□□ -0.74
DDX54-201ENST00000306014 TNRC6AQ8NDV7 1962 aaKnown RBP10.44□□□□□ -0.74
DDX54-201ENST00000306014 A0A1B0GXF2 115 aa10.43□□□□□ -0.74
DDX54-201ENST00000306014 C19orf71A6NCJ1 209 aa10.43□□□□□ -0.74
DDX54-201ENST00000306014 RHPN1-AS1Q9BWJ2 59 aa10.43□□□□□ -0.74
DDX54-201ENST00000306014 C22orf34Q6ZV56 151 aa10.43□□□□□ -0.74
DDX54-201ENST00000306014 TEX22C9J3V5 150 aa10.43□□□□□ -0.74
DDX54-201ENST00000306014 GRNP28799 593 aaKnown RBP10.43□□□□□ -0.74
DDX54-201ENST00000306014 DLX4Q92988 240 aaPredicted RBP10.43□□□□□ -0.74
DDX54-201ENST00000306014 AMTNQ6UX39 209 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 MBD6Q96DN6 1003 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 TTTY13Q9BZ97 58 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 OVOL3O00110 214 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 VCYO14598 125 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 SPRY2O43597 315 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 CRYGCP07315 174 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 AGPAT4-IT1Q9H0P7 198 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 CD28P10747 220 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 CTRLP40313 264 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 RUSC1-AS1Q66K80 236 aa10.42□□□□□ -0.74
DDX54-201ENST00000306014 IGHV3-73A0A0B4J1V6 119 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 SAP30O75446 220 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 IGLV1-47P01700 117 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 SLC25A16P16260 332 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 ZNF876PQ49A33 203 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 NEGR1Q7Z3B1 354 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 ITLN2Q8WWU7 325 aaPredicted RBP10.41□□□□□ -0.74
DDX54-201ENST00000306014 UBE2L6O14933 153 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 UBE2E1P51965 193 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 LINC00310P59036 64 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 PRSS22Q9GZN4 317 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 CHD8Q9HCK8 2581 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 H3BMG7 143 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 C1orf159Q96HA4 380 aa10.41□□□□□ -0.74
DDX54-201ENST00000306014 CFHR4Q92496 578 aa10.4□□□□□ -0.74
DDX54-201ENST00000306014 ERG28Q9UKR5 140 aa10.4□□□□□ -0.74
DDX54-201ENST00000306014 A0A0U1RRA0 63 aa10.4□□□□□ -0.74
DDX54-201ENST00000306014 SIVA1O15304 175 aa10.4□□□□□ -0.74
DDX54-201ENST00000306014 LINC01587Q99440 93 aa10.4□□□□□ -0.74
DDX54-201ENST00000306014 SMIM2Q9BVW6 85 aa10.4□□□□□ -0.74
DDX54-201ENST00000306014 TSSC4Q9Y5U2 329 aaPredicted RBP10.4□□□□□ -0.74
DDX54-201ENST00000306014 FOXE3Q13461 319 aa10.4□□□□□ -0.74
DDX54-201ENST00000306014 MLST8Q9BVC4 326 aa10.4□□□□□ -0.74
DDX54-201ENST00000306014 TP53TG1Q9Y2A0 90 aa10.4□□□□□ -0.74
DDX54-201ENST00000306014 F8VRH5 84 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms