RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 NDUFS5O43920 106 aa10.75□□□□□ -0.69
CHRFAM7A-201ENST00000299847 CFHR4Q92496 578 aa10.75□□□□□ -0.69
CHRFAM7A-201ENST00000299847 CACNA1EQ15878 2313 aa10.75□□□□□ -0.69
CHRFAM7A-201ENST00000299847 POLEQ07864 2286 aa10.75□□□□□ -0.69
CHRFAM7A-201ENST00000299847 NDUFA4O00483 81 aa10.75□□□□□ -0.69
CHRFAM7A-201ENST00000299847 TAL2Q16559 108 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 FXYD5Q96DB9 178 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 IGKV2D-24A0A075B6R9 120 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 K7EN84 100 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 IGHV4-59P01825 116 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 LMO1P25800 156 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 hADV29S1A0JD25 119 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 K7EM74 188 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 NPSP0C0P6 89 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 IGLL1P15814 213 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 CRYGCP07315 174 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 APOC4P55056 127 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 CEND1Q8N111 149 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 DYNAPQ8N1N2 210 aa10.74□□□□□ -0.69
CHRFAM7A-201ENST00000299847 C9orf118A6NHY6 69 aa10.73□□□□□ -0.69
CHRFAM7A-201ENST00000299847 ESM1Q9NQ30 184 aa10.73□□□□□ -0.69
CHRFAM7A-201ENST00000299847 IGHV7-4-1A0A0J9YVY3 117 aa10.73□□□□□ -0.69
CHRFAM7A-201ENST00000299847 VOPP1Q96AW1 172 aa10.73□□□□□ -0.69
CHRFAM7A-201ENST00000299847 K7EMI3 77 aa10.73□□□□□ -0.69
CHRFAM7A-201ENST00000299847 RHODO00212 210 aa10.73□□□□□ -0.69
CHRFAM7A-201ENST00000299847 DEFB112Q30KQ8 113 aa10.73□□□□□ -0.69
CHRFAM7A-201ENST00000299847 GATA1P15976 413 aaPredicted RBP10.73□□□□□ -0.69
CHRFAM7A-201ENST00000299847 RITA1Q96K30 269 aa10.73□□□□□ -0.69
CHRFAM7A-201ENST00000299847 CARD19Q96LW7 228 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 C1orf147Q96MC9 270 aaPredicted RBP10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 FRMPD3Q5JV73 1810 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 GATA3P23771 443 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 SLURP1P55000 103 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 AMTNQ6UX39 209 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 AKAP6Q13023 2319 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 Q6ZVH6 145 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 FAM215AQ9Y5M1 114 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 U3KQE9 123 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 H3BMG7 143 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 NRGNQ92686 78 aa10.72□□□□□ -0.69
CHRFAM7A-201ENST00000299847 DSCR8Q96T75 97 aa10.71□□□□□ -0.69
CHRFAM7A-201ENST00000299847 PLXND1Q9Y4D7 1925 aa10.71□□□□□ -0.69
CHRFAM7A-201ENST00000299847 RPL18AQ02543 176 aaKnown RBP10.71□□□□□ -0.69
CHRFAM7A-201ENST00000299847 RSPO1Q2MKA7 263 aaPredicted RBP10.71□□□□□ -0.69
CHRFAM7A-201ENST00000299847 ETDBQ3ZM63 59 aa10.71□□□□□ -0.69
CHRFAM7A-201ENST00000299847 BVES-AS1Q5T3Y7 98 aa10.71□□□□□ -0.7
CHRFAM7A-201ENST00000299847 CEP250Q9BV73 2442 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGLV10-54A0A075B6I4 117 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 KMT2EQ8IZD2 1858 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 DOCK9Q9BZ29 2069 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGLC1P0CG04 106 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 TMEM190Q8WZ59 177 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 C22orf46C9J442 243 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGHG4P01861 327 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGLC2P0DOY2 106 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGLC3P0DOY3 106 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGHV4-28A0A0C4DH34 117 aa10.7□□□□□ -0.7
CHRFAM7A-201ENST00000299847 DOCK11Q5JSL3 2073 aa10.69□□□□□ -0.7
CHRFAM7A-201ENST00000299847 UBE2BP63146 152 aa10.69□□□□□ -0.7
CHRFAM7A-201ENST00000299847 COX8AP10176 69 aa10.69□□□□□ -0.7
CHRFAM7A-201ENST00000299847 EGR2P11161 476 aaPredicted RBP10.69□□□□□ -0.7
CHRFAM7A-201ENST00000299847 SMIM2Q9BVW6 85 aa10.69□□□□□ -0.7
CHRFAM7A-201ENST00000299847 CTSZQ9UBR2 303 aa10.69□□□□□ -0.7
CHRFAM7A-201ENST00000299847 C15orf53Q8NAA6 179 aa10.69□□□□□ -0.7
CHRFAM7A-201ENST00000299847 RPL39LQ96EH5 51 aaKnown RBP10.69□□□□□ -0.7
CHRFAM7A-201ENST00000299847 MRPL53Q96EL3 112 aaKnown RBP10.69□□□□□ -0.7
CHRFAM7A-201ENST00000299847 E9PQ18 207 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 J3QQQ9 107 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGHV4-38-2P0DP08 117 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 CDPF1Q6NVV7 123 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 WIPF2Q8TF74 440 aaPredicted RBP10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 UBL5Q9BZL1 73 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 TMEM14CQ9P0S9 112 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 ZDBF2Q9HCK1 2354 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 J3QKU1 62 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGHV3-30P01768 117 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGHV3-33P01772 117 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGHV3-30-3P0DP02 117 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGHV3-30-5P0DP03 117 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 CT83Q5H943 113 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 C5orf38Q86SI9 138 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 PRSS33Q8NF86 280 aa10.68□□□□□ -0.7
CHRFAM7A-201ENST00000299847 KIAA1671Q9BY89 1806 aa10.67□□□□□ -0.7
CHRFAM7A-201ENST00000299847 SHISA9B4DS77 424 aa10.67□□□□□ -0.7
CHRFAM7A-201ENST00000299847 ZNF491Q8N8L2 437 aa10.67□□□□□ -0.7
CHRFAM7A-201ENST00000299847 INTS1Q8N201 2190 aaKnown RBP10.67□□□□□ -0.7
CHRFAM7A-201ENST00000299847 SLX1AQ9BQ83 275 aa10.67□□□□□ -0.7
CHRFAM7A-201ENST00000299847 PRO1854Q9UHT4 67 aa10.67□□□□□ -0.7
CHRFAM7A-201ENST00000299847 A0A1W2PPM0 123 aa10.67□□□□□ -0.7
CHRFAM7A-201ENST00000299847 K7EP34 96 aa10.67□□□□□ -0.7
CHRFAM7A-201ENST00000299847 DKK4Q9UBT3 224 aa10.67□□□□□ -0.7
CHRFAM7A-201ENST00000299847 CCL24O00175 119 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 LTAP01374 205 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGLV1-44P01699 117 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 LGALS9BQ3B8N2 356 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 LGALS9CQ6DKI2 356 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 C20orf144Q9BQM9 153 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 ARFGEF3Q5TH69 2177 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 HERVK_113P63121 156 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 WT1P19544 449 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms