RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 A0A096LNJ9 63 aa11.71□□□□□ -0.53
SPIDR-201ENST00000297423 LYNX1G3V0Z9 82 aa11.71□□□□□ -0.53
SPIDR-201ENST00000297423 MT-ATP8P03928 68 aa11.71□□□□□ -0.53
SPIDR-201ENST00000297423 LYNX1P0DP58 116 aa11.71□□□□□ -0.53
SPIDR-201ENST00000297423 CRIP1P50238 77 aa11.71□□□□□ -0.54
SPIDR-201ENST00000297423 AKAP13Q12802 2813 aa11.71□□□□□ -0.54
SPIDR-201ENST00000297423 MAPKAPK5-AS1Q8N8E1 139 aa11.7□□□□□ -0.54
SPIDR-201ENST00000297423 MGAQ8IWI9 3026 aa11.7□□□□□ -0.54
SPIDR-201ENST00000297423 TRBV19A0A075B6N1 114 aa11.7□□□□□ -0.54
SPIDR-201ENST00000297423 CLEC3BP05452 202 aa11.7□□□□□ -0.54
SPIDR-201ENST00000297423 EGR2P11161 476 aaPredicted RBP11.7□□□□□ -0.54
SPIDR-201ENST00000297423 PPP1R27Q86WC6 154 aa11.7□□□□□ -0.54
SPIDR-201ENST00000297423 TRBV20-1A0A075B6N2 111 aa11.7□□□□□ -0.54
SPIDR-201ENST00000297423 HLA-DRB4P13762 266 aa11.7□□□□□ -0.54
SPIDR-201ENST00000297423 HLA-DRB4X5D2U9 266 aa11.7□□□□□ -0.54
SPIDR-201ENST00000297423 M0R381 172 aa11.69□□□□□ -0.54
SPIDR-201ENST00000297423 Q6AWC8 147 aa11.69□□□□□ -0.54
SPIDR-201ENST00000297423 RNF183Q96D59 192 aa11.69□□□□□ -0.54
SPIDR-201ENST00000297423 A0A1B0GW15 77 aa11.69□□□□□ -0.54
SPIDR-201ENST00000297423 MYCNOSP40205 109 aa11.69□□□□□ -0.54
SPIDR-201ENST00000297423 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
SPIDR-201ENST00000297423 TRAV8-2A0A0B4J237 113 aa11.69□□□□□ -0.54
SPIDR-201ENST00000297423 ZNF815PA8K554 130 aa11.69□□□□□ -0.54
SPIDR-201ENST00000297423 PIP4P2Q8N4L2 257 aa11.69□□□□□ -0.54
SPIDR-201ENST00000297423 KALRNO60229 2985 aa11.68□□□□□ -0.54
SPIDR-201ENST00000297423 DMXL2Q8TDJ6 3036 aa11.68□□□□□ -0.54
SPIDR-201ENST00000297423 TACC2O95359 2948 aa11.68□□□□□ -0.54
SPIDR-201ENST00000297423 SIVA1O15304 175 aa11.68□□□□□ -0.54
SPIDR-201ENST00000297423 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
SPIDR-201ENST00000297423 ZNF48Q96MX3 618 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-201ENST00000297423 LY6DQ14210 128 aa11.68□□□□□ -0.54
SPIDR-201ENST00000297423 PRSS29PA6NIE9 313 aa11.67□□□□□ -0.54
SPIDR-201ENST00000297423 ODF1Q14990 250 aa11.67□□□□□ -0.54
SPIDR-201ENST00000297423 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
SPIDR-201ENST00000297423 TEX29Q8N6K0 151 aa11.67□□□□□ -0.54
SPIDR-201ENST00000297423 CGB3P0DN86 165 aa11.67□□□□□ -0.54
SPIDR-201ENST00000297423 CGB7P0DN87 165 aa11.67□□□□□ -0.54
SPIDR-201ENST00000297423 BSPH1Q075Z2 132 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 ZNF562Q6V9R5 426 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 ZNF833PQ6ZTB9 187 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 RNF182Q8N6D2 247 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 C3orf56Q8N813 242 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 RAX2Q96IS3 184 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 CENPEQ02224 2701 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 GATA3P23771 443 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 ATP5LO75964 103 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 RRN3P1Q2M238 152 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 TTC32Q5I0X7 151 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 NXT2Q9NPJ8 142 aaKnown RBP11.66□□□□□ -0.54
SPIDR-201ENST00000297423 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
SPIDR-201ENST00000297423 IGLV2-11P01706 119 aa11.65□□□□□ -0.54
SPIDR-201ENST00000297423 IGHV3-64A0A075B6Q5 118 aa11.65□□□□□ -0.54
SPIDR-201ENST00000297423 DLX4Q92988 240 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-201ENST00000297423 ZFP2Q6ZN57 461 aa11.65□□□□□ -0.55
SPIDR-201ENST00000297423 F5H697 171 aa11.64□□□□□ -0.55
SPIDR-201ENST00000297423 SIGLEC15Q6ZMC9 328 aa11.64□□□□□ -0.55
SPIDR-201ENST00000297423 KLHL30-AS1Q8NEE0 82 aa11.64□□□□□ -0.55
SPIDR-201ENST00000297423 IGKV1-17P01599 117 aa11.64□□□□□ -0.55
SPIDR-201ENST00000297423 CD3EP07766 207 aa11.64□□□□□ -0.55
SPIDR-201ENST00000297423 TMEM170BQ5T4T1 132 aa11.64□□□□□ -0.55
SPIDR-201ENST00000297423 SHANK2-AS3Q9BTD1 123 aa11.64□□□□□ -0.55
SPIDR-201ENST00000297423 FABP5P3A8MUU1 101 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 ZNF80P51504 273 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-201ENST00000297423 DTX2Q86UW9 622 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 KIR2DL4Q99706 377 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 FOXI1Q12951 378 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 TMEM238LA0A1B0GVL6 79 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 A6NJY4 79 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 E9PLD3 99 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 SCGB1A1P11684 91 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 ZFAND6Q6FIF0 208 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 LINC01560Q8TB33 94 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 PRR25Q96S07 402 aa11.63□□□□□ -0.55
SPIDR-201ENST00000297423 SLC25A16P16260 332 aa11.62□□□□□ -0.55
SPIDR-201ENST00000297423 LAGE3Q14657 143 aa11.62□□□□□ -0.55
SPIDR-201ENST00000297423 IGHV4-39P01824 125 aa11.62□□□□□ -0.55
SPIDR-201ENST00000297423 TRGV3P03979 118 aa11.62□□□□□ -0.55
SPIDR-201ENST00000297423 ECSCRQ19T08 205 aa11.62□□□□□ -0.55
SPIDR-201ENST00000297423 C22orf34Q6ZV56 151 aa11.62□□□□□ -0.55
SPIDR-201ENST00000297423 SNCGO76070 127 aa11.61□□□□□ -0.55
SPIDR-201ENST00000297423 TMEM78Q5T7P6 136 aa11.61□□□□□ -0.55
SPIDR-201ENST00000297423 A8MWV9 139 aa11.61□□□□□ -0.55
SPIDR-201ENST00000297423 FSTL3O95633 263 aa11.61□□□□□ -0.55
SPIDR-201ENST00000297423 HTN1P15515 57 aa11.61□□□□□ -0.55
SPIDR-201ENST00000297423 NUP37Q8NFH4 326 aa11.61□□□□□ -0.55
SPIDR-201ENST00000297423 DPF1Q92782 380 aa11.61□□□□□ -0.55
SPIDR-201ENST00000297423 LHBP01229 141 aa11.61□□□□□ -0.55
SPIDR-201ENST00000297423 IGLV2-23P01705 113 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 PRSS2P07478 247 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 MFAP4P55083 255 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 SMIM20Q8N5G0 67 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 ZNF491Q8N8L2 437 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 RNASE6Q93091 150 aaKnown RBP11.6□□□□□ -0.55
SPIDR-201ENST00000297423 IGLV3-9A0A075B6K5 115 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 TIMM23O14925 209 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 IGHV1-8P0DP01 117 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 IL17RELQ6ZVW7 336 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 HIVEP2P31629 2446 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 HIVEP3Q5T1R4 2406 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 ADGRG4Q8IZF6 3080 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms