RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FXYD5Q96DB9 178 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 RNF5Q99942 180 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 TRAV8-2A0A0B4J237 113 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 CHAC1Q9BUX1 264 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 ERCC8Q13216 396 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 TMEM75Q8N9X5 138 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 RHPN1-AS1Q9BWJ2 59 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 USMG5Q96IX5 58 aa10.69□□□□□ -0.7
HPS3-201ENST00000296051 ATP6V0E1O15342 81 aa10.69□□□□□ -0.7
HPS3-201ENST00000296051 PPBPP02775 128 aa10.69□□□□□ -0.7
HPS3-201ENST00000296051 COX8AP10176 69 aa10.69□□□□□ -0.7
HPS3-201ENST00000296051 IGFL2Q6UWQ7 119 aa10.69□□□□□ -0.7
HPS3-201ENST00000296051 FAM231DQ6ZW35 169 aa10.69□□□□□ -0.7
HPS3-201ENST00000296051 PCP2Q8IVA1 136 aa10.69□□□□□ -0.7
HPS3-201ENST00000296051 MRAP2Q96G30 205 aa10.69□□□□□ -0.7
HPS3-201ENST00000296051 TTTY13Q9BZ97 58 aa10.69□□□□□ -0.7
HPS3-201ENST00000296051 IGHV4-61A0A0C4DH41 118 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 LOXP28300 417 aaPredicted RBP10.68□□□□□ -0.7
HPS3-201ENST00000296051 IGHV4-30-2A0A087WSY4 118 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 FNDC10F2Z333 226 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 SRSF1Q07955 248 aaKnown RBP eCLIP10.68□□□□□ -0.7
HPS3-201ENST00000296051 DKK2Q9UBU2 259 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 IGHV3-53P01767 116 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 DEFB130BP0DP73 79 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 DEFB130AP0DP74 79 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 BRWD1-AS2P59051 145 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 ADORA2A-AS1P86434 159 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 TMEM249Q2WGJ8 235 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 UTF1Q5T230 341 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 SIGLEC8Q9NYZ4 499 aa10.68□□□□□ -0.7
HPS3-201ENST00000296051 CHTOPQ9Y3Y2 248 aaKnown RBP10.68□□□□□ -0.7
HPS3-201ENST00000296051 TSSC4Q9Y5U2 329 aaPredicted RBP10.68□□□□□ -0.7
HPS3-201ENST00000296051 A0A087WX48 190 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 A0A0U1RRA0 63 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 SCGB1A1P11684 91 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 PAX1P15863 534 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 MRAPQ8TCY5 172 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 IGKV3D-20A0A0C4DH25 116 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 C9orf118A6NHY6 69 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 PROP1O75360 226 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 IGHV4-39P01824 125 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 CMC4P56277 68 aaPredicted RBP10.67□□□□□ -0.7
HPS3-201ENST00000296051 DEFB131AP59861 70 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 CHCHD5Q9BSY4 110 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 DKK4Q9UBT3 224 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 WISP2O76076 250 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 IGLV1-44P01699 117 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 CIRBPQ14011 172 aaKnown RBP10.67□□□□□ -0.7
HPS3-201ENST00000296051 PAPPA-AS1Q5QFB9 102 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 FAM120AOSQ5T036 256 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 TP53TG3Q9ULZ0 132 aa10.67□□□□□ -0.7
HPS3-201ENST00000296051 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 TRAV21A0A0B4J279 112 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 CDKN1BP46527 198 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 KIAA1549Q9HCM3 1950 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 ZNF562Q6V9R5 426 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 RNF182Q8N6D2 247 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 TRGV1A0A0A0MS02 117 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 NPYP01303 97 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 CKS1BP61024 79 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 MRPL51Q4U2R6 128 aaKnown RBP10.66□□□□□ -0.7
HPS3-201ENST00000296051 FAM104BQ5XKR9 115 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 DEFB125Q8N687 156 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 DPH3P1Q9H4G8 78 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 SHISA9B4DS77 424 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 J3QLI3 93 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 TNFRSF6BO95407 300 aa10.66□□□□□ -0.7
HPS3-201ENST00000296051 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
HPS3-201ENST00000296051 HCFC1P51610 2035 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 TRBV7-1A0A0A6YYK4 115 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 H3BMG7 143 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 LAGE3Q14657 143 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 KRTAP27-1Q3LI81 207 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 PATE2Q6UY27 113 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 DEFB112Q30KQ8 113 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 ZNF747Q9BV97 191 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 PKD1L2Q7Z442 2459 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 H3BRM9 83 aa10.65□□□□□ -0.7
HPS3-201ENST00000296051 IGHV4-59P01825 116 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 VGLL1Q99990 258 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 DAZ1Q9NQZ3 744 aaKnown RBP10.64□□□□□ -0.71
HPS3-201ENST00000296051 C22orf46C9J442 243 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 E7EUB6 86 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 SPRY2O43597 315 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 IGHV3-73A0A0B4J1V6 119 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 TRAV12-3A0A0B4J271 114 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 NPC2P61916 151 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 TRBV19A0A075B6N1 114 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 SHANK2-AS3Q9BTD1 123 aa10.64□□□□□ -0.71
HPS3-201ENST00000296051 MRPL36Q9P0J6 103 aaKnown RBP10.64□□□□□ -0.71
HPS3-201ENST00000296051 OVOL1O14753 267 aa10.63□□□□□ -0.71
HPS3-201ENST00000296051 ANAPC13Q9BS18 74 aa10.63□□□□□ -0.71
HPS3-201ENST00000296051 ZNF492Q9P255 531 aa10.63□□□□□ -0.71
HPS3-201ENST00000296051 XCL2Q9UBD3 114 aa10.63□□□□□ -0.71
HPS3-201ENST00000296051 TAX1BP3O14907 124 aa10.63□□□□□ -0.71
HPS3-201ENST00000296051 CRPP02741 224 aa10.63□□□□□ -0.71
HPS3-201ENST00000296051 HLA-DMBP28068 263 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms